Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP17_F_C05
         (882 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

S77927-1|AAB33987.1|  168|Drosophila melanogaster pipsqueak-l(3)...    58   2e-08
S41484-1|AAB19296.2|   73|Drosophila melanogaster l(3)S12 protein.     58   2e-08
AY119283-1|AAM51143.1|  110|Drosophila melanogaster SD27354p pro...    58   2e-08
AE014297-1621|AAF54894.1|  110|Drosophila melanogaster CG7620-PA...    58   2e-08

>S77927-1|AAB33987.1|  168|Drosophila melanogaster
           pipsqueak-l(3)S12-fusion protein protein.
          Length = 168

 Score = 57.6 bits (133), Expect = 2e-08
 Identities = 28/72 (38%), Positives = 39/72 (54%)
 Frame = +1

Query: 187 LKXLMXXVVXSLLXAAXXXKKGLVIFGXXXSKIPXFXXXFLYGIGTGIGFGLAAFVKTSK 366
           LK ++  V    +       +  VIFG   ++IP F   FLYGI  GIG GL  F+ TS+
Sbjct: 85  LKTIIDFVYRGEIDVTESELQSFVIFGRDVAQIPCFRNSFLYGISGGIGIGLLTFLGTSR 144

Query: 367 PMLAQHIGVGTF 402
             L+ H+G G+F
Sbjct: 145 THLSTHVGFGSF 156


>S41484-1|AAB19296.2|   73|Drosophila melanogaster l(3)S12 protein.
          Length = 73

 Score = 57.6 bits (133), Expect = 2e-08
 Identities = 26/52 (50%), Positives = 33/52 (63%)
 Frame = +1

Query: 247 KGLVIFGXXXSKIPXFXXXFLYGIGTGIGFGLAAFVKTSKPMLAQHIGVGTF 402
           K  VIFG   ++IP F   FLYGI  GIG GL  F+ TS+  L+ H+G G+F
Sbjct: 10  KSFVIFGRDVAQIPCFRNSFLYGISGGIGIGLLTFLGTSRTHLSTHVGFGSF 61


>AY119283-1|AAM51143.1|  110|Drosophila melanogaster SD27354p
           protein.
          Length = 110

 Score = 57.6 bits (133), Expect = 2e-08
 Identities = 26/52 (50%), Positives = 33/52 (63%)
 Frame = +1

Query: 247 KGLVIFGXXXSKIPXFXXXFLYGIGTGIGFGLAAFVKTSKPMLAQHIGVGTF 402
           K  VIFG   ++IP F   FLYGI  GIG GL  F+ TS+  L+ H+G G+F
Sbjct: 10  KSFVIFGRDVAQIPCFRNSFLYGISGGIGIGLLTFLGTSRTHLSTHVGFGSF 61



 Score = 41.9 bits (94), Expect = 0.001
 Identities = 15/32 (46%), Positives = 23/32 (71%)
 Frame = +2

Query: 413 TLLYWSYCRYRWSQQRFDAQLLXDALKDKILY 508
           T+ YW  CRY+WS +RF+ Q L +A++ + LY
Sbjct: 65  TIAYWMTCRYQWSVRRFEQQQLREAMRRQALY 96


>AE014297-1621|AAF54894.1|  110|Drosophila melanogaster CG7620-PA
           protein.
          Length = 110

 Score = 57.6 bits (133), Expect = 2e-08
 Identities = 26/52 (50%), Positives = 33/52 (63%)
 Frame = +1

Query: 247 KGLVIFGXXXSKIPXFXXXFLYGIGTGIGFGLAAFVKTSKPMLAQHIGVGTF 402
           K  VIFG   ++IP F   FLYGI  GIG GL  F+ TS+  L+ H+G G+F
Sbjct: 10  KSFVIFGRDVAQIPCFRNSFLYGISGGIGIGLLTFLGTSRTHLSTHVGFGSF 61



 Score = 41.9 bits (94), Expect = 0.001
 Identities = 15/32 (46%), Positives = 23/32 (71%)
 Frame = +2

Query: 413 TLLYWSYCRYRWSQQRFDAQLLXDALKDKILY 508
           T+ YW  CRY+WS +RF+ Q L +A++ + LY
Sbjct: 65  TIAYWMTCRYQWSVRRFEQQQLREAMRRQALY 96


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,372,046
Number of Sequences: 53049
Number of extensions: 255766
Number of successful extensions: 550
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 528
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 547
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 4291240668
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)