Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP17_F_C04
(870 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81146-10|CAB54274.2| 796|Caenorhabditis elegans Hypothetical p... 30 1.9
Z81146-9|CAB03528.1| 817|Caenorhabditis elegans Hypothetical pr... 30 1.9
Z81121-2|CAB54308.2| 796|Caenorhabditis elegans Hypothetical pr... 30 1.9
Z81121-1|CAB03351.1| 817|Caenorhabditis elegans Hypothetical pr... 30 1.9
Z70308-14|CAB54254.2| 796|Caenorhabditis elegans Hypothetical p... 30 1.9
Z70308-13|CAA94353.1| 817|Caenorhabditis elegans Hypothetical p... 30 1.9
AY090019-1|AAM09088.1| 796|Caenorhabditis elegans minibrain kin... 30 1.9
AF038606-4|AAB92026.1| 331|Caenorhabditis elegans Hypothetical ... 29 4.3
AF038606-3|AAX55701.1| 393|Caenorhabditis elegans Hypothetical ... 29 4.3
AF038606-2|AAX55700.1| 404|Caenorhabditis elegans Hypothetical ... 29 4.3
AB182367-3|BAD23998.1| 331|Caenorhabditis elegans hypothetical ... 29 4.3
AB182367-2|BAD23997.1| 393|Caenorhabditis elegans hypothetical ... 29 4.3
AB182367-1|BAD23996.1| 404|Caenorhabditis elegans hypothetical ... 29 4.3
Z81088-4|CAB03125.1| 105|Caenorhabditis elegans Hypothetical pr... 28 7.5
Z70286-6|CAA94293.1| 3672|Caenorhabditis elegans Hypothetical pr... 28 10.0
Z70286-5|CAB61016.1| 3704|Caenorhabditis elegans Hypothetical pr... 28 10.0
D83173-1|BAA11828.1| 1518|Caenorhabditis elegans laminin A protein. 28 10.0
AB016806-1|BAA32347.1| 3704|Caenorhabditis elegans laminin alpha... 28 10.0
AB001074-1|BAA19229.1| 3704|Caenorhabditis elegans laminin alpha... 28 10.0
>Z81146-10|CAB54274.2| 796|Caenorhabditis elegans Hypothetical
protein F49E11.1c protein.
Length = 796
Score = 30.3 bits (65), Expect = 1.9
Identities = 27/77 (35%), Positives = 36/77 (46%), Gaps = 2/77 (2%)
Frame = +3
Query: 63 SPVRISSALSLSTVHHGRQVRS--SLRLHRSGPRSDGATRRSRLLQGHRTPHQGVP*DFX 236
+P S A S S+ HH S SL + G + A+ S L+QGHR P G
Sbjct: 69 APTSFSGASSSSSNHHHPVYHSQNSLPPNLLGSSQNSASSNS-LVQGHRNPALG-----S 122
Query: 237 NNSLTRSPSQRTHRTSA 287
N+LTRS Q + S+
Sbjct: 123 GNTLTRSYHQPSSTNSS 139
>Z81146-9|CAB03528.1| 817|Caenorhabditis elegans Hypothetical
protein F49E11.1b protein.
Length = 817
Score = 30.3 bits (65), Expect = 1.9
Identities = 27/77 (35%), Positives = 36/77 (46%), Gaps = 2/77 (2%)
Frame = +3
Query: 63 SPVRISSALSLSTVHHGRQVRS--SLRLHRSGPRSDGATRRSRLLQGHRTPHQGVP*DFX 236
+P S A S S+ HH S SL + G + A+ S L+QGHR P G
Sbjct: 69 APTSFSGASSSSSNHHHPVYHSQNSLPPNLLGSSQNSASSNS-LVQGHRNPALG-----S 122
Query: 237 NNSLTRSPSQRTHRTSA 287
N+LTRS Q + S+
Sbjct: 123 GNTLTRSYHQPSSTNSS 139
>Z81121-2|CAB54308.2| 796|Caenorhabditis elegans Hypothetical
protein F49E11.1c protein.
Length = 796
Score = 30.3 bits (65), Expect = 1.9
Identities = 27/77 (35%), Positives = 36/77 (46%), Gaps = 2/77 (2%)
Frame = +3
Query: 63 SPVRISSALSLSTVHHGRQVRS--SLRLHRSGPRSDGATRRSRLLQGHRTPHQGVP*DFX 236
+P S A S S+ HH S SL + G + A+ S L+QGHR P G
Sbjct: 69 APTSFSGASSSSSNHHHPVYHSQNSLPPNLLGSSQNSASSNS-LVQGHRNPALG-----S 122
Query: 237 NNSLTRSPSQRTHRTSA 287
N+LTRS Q + S+
Sbjct: 123 GNTLTRSYHQPSSTNSS 139
>Z81121-1|CAB03351.1| 817|Caenorhabditis elegans Hypothetical
protein F49E11.1b protein.
Length = 817
Score = 30.3 bits (65), Expect = 1.9
Identities = 27/77 (35%), Positives = 36/77 (46%), Gaps = 2/77 (2%)
Frame = +3
Query: 63 SPVRISSALSLSTVHHGRQVRS--SLRLHRSGPRSDGATRRSRLLQGHRTPHQGVP*DFX 236
+P S A S S+ HH S SL + G + A+ S L+QGHR P G
Sbjct: 69 APTSFSGASSSSSNHHHPVYHSQNSLPPNLLGSSQNSASSNS-LVQGHRNPALG-----S 122
Query: 237 NNSLTRSPSQRTHRTSA 287
N+LTRS Q + S+
Sbjct: 123 GNTLTRSYHQPSSTNSS 139
>Z70308-14|CAB54254.2| 796|Caenorhabditis elegans Hypothetical
protein F49E11.1c protein.
Length = 796
Score = 30.3 bits (65), Expect = 1.9
Identities = 27/77 (35%), Positives = 36/77 (46%), Gaps = 2/77 (2%)
Frame = +3
Query: 63 SPVRISSALSLSTVHHGRQVRS--SLRLHRSGPRSDGATRRSRLLQGHRTPHQGVP*DFX 236
+P S A S S+ HH S SL + G + A+ S L+QGHR P G
Sbjct: 69 APTSFSGASSSSSNHHHPVYHSQNSLPPNLLGSSQNSASSNS-LVQGHRNPALG-----S 122
Query: 237 NNSLTRSPSQRTHRTSA 287
N+LTRS Q + S+
Sbjct: 123 GNTLTRSYHQPSSTNSS 139
>Z70308-13|CAA94353.1| 817|Caenorhabditis elegans Hypothetical
protein F49E11.1b protein.
Length = 817
Score = 30.3 bits (65), Expect = 1.9
Identities = 27/77 (35%), Positives = 36/77 (46%), Gaps = 2/77 (2%)
Frame = +3
Query: 63 SPVRISSALSLSTVHHGRQVRS--SLRLHRSGPRSDGATRRSRLLQGHRTPHQGVP*DFX 236
+P S A S S+ HH S SL + G + A+ S L+QGHR P G
Sbjct: 69 APTSFSGASSSSSNHHHPVYHSQNSLPPNLLGSSQNSASSNS-LVQGHRNPALG-----S 122
Query: 237 NNSLTRSPSQRTHRTSA 287
N+LTRS Q + S+
Sbjct: 123 GNTLTRSYHQPSSTNSS 139
>AY090019-1|AAM09088.1| 796|Caenorhabditis elegans minibrain kinase
2 protein.
Length = 796
Score = 30.3 bits (65), Expect = 1.9
Identities = 27/77 (35%), Positives = 36/77 (46%), Gaps = 2/77 (2%)
Frame = +3
Query: 63 SPVRISSALSLSTVHHGRQVRS--SLRLHRSGPRSDGATRRSRLLQGHRTPHQGVP*DFX 236
+P S A S S+ HH S SL + G + A+ S L+QGHR P G
Sbjct: 69 APTSFSGASSSSSNHHHPVYHSQNSLPPNLLGSSQNSASSNS-LVQGHRNPALG-----S 122
Query: 237 NNSLTRSPSQRTHRTSA 287
N+LTRS Q + S+
Sbjct: 123 GNTLTRSYHQPSSTNSS 139
>AF038606-4|AAB92026.1| 331|Caenorhabditis elegans Hypothetical
protein C04C3.5a protein.
Length = 331
Score = 29.1 bits (62), Expect = 4.3
Identities = 16/36 (44%), Positives = 24/36 (66%), Gaps = 3/36 (8%)
Frame = +1
Query: 490 LQAAVQNTVQESQKLAKK---VSSNVQETNEKLAPK 588
LQA VQN QE+++L+ K V+S+ E +EK+ K
Sbjct: 110 LQATVQNIAQETEQLSNKLNNVASDEAELDEKIERK 145
>AF038606-3|AAX55701.1| 393|Caenorhabditis elegans Hypothetical
protein C04C3.5c protein.
Length = 393
Score = 29.1 bits (62), Expect = 4.3
Identities = 16/36 (44%), Positives = 24/36 (66%), Gaps = 3/36 (8%)
Frame = +1
Query: 490 LQAAVQNTVQESQKLAKK---VSSNVQETNEKLAPK 588
LQA VQN QE+++L+ K V+S+ E +EK+ K
Sbjct: 172 LQATVQNIAQETEQLSNKLNNVASDEAELDEKIERK 207
>AF038606-2|AAX55700.1| 404|Caenorhabditis elegans Hypothetical
protein C04C3.5b protein.
Length = 404
Score = 29.1 bits (62), Expect = 4.3
Identities = 16/36 (44%), Positives = 24/36 (66%), Gaps = 3/36 (8%)
Frame = +1
Query: 490 LQAAVQNTVQESQKLAKK---VSSNVQETNEKLAPK 588
LQA VQN QE+++L+ K V+S+ E +EK+ K
Sbjct: 183 LQATVQNIAQETEQLSNKLNNVASDEAELDEKIERK 218
>AB182367-3|BAD23998.1| 331|Caenorhabditis elegans hypothetical
protein protein.
Length = 331
Score = 29.1 bits (62), Expect = 4.3
Identities = 16/36 (44%), Positives = 24/36 (66%), Gaps = 3/36 (8%)
Frame = +1
Query: 490 LQAAVQNTVQESQKLAKK---VSSNVQETNEKLAPK 588
LQA VQN QE+++L+ K V+S+ E +EK+ K
Sbjct: 110 LQATVQNIAQETEQLSNKLNNVASDEAELDEKIERK 145
>AB182367-2|BAD23997.1| 393|Caenorhabditis elegans hypothetical
protein protein.
Length = 393
Score = 29.1 bits (62), Expect = 4.3
Identities = 16/36 (44%), Positives = 24/36 (66%), Gaps = 3/36 (8%)
Frame = +1
Query: 490 LQAAVQNTVQESQKLAKK---VSSNVQETNEKLAPK 588
LQA VQN QE+++L+ K V+S+ E +EK+ K
Sbjct: 172 LQATVQNIAQETEQLSNKLNNVASDEAELDEKIERK 207
>AB182367-1|BAD23996.1| 404|Caenorhabditis elegans hypothetical
protein protein.
Length = 404
Score = 29.1 bits (62), Expect = 4.3
Identities = 16/36 (44%), Positives = 24/36 (66%), Gaps = 3/36 (8%)
Frame = +1
Query: 490 LQAAVQNTVQESQKLAKK---VSSNVQETNEKLAPK 588
LQA VQN QE+++L+ K V+S+ E +EK+ K
Sbjct: 183 LQATVQNIAQETEQLSNKLNNVASDEAELDEKIERK 218
>Z81088-4|CAB03125.1| 105|Caenorhabditis elegans Hypothetical
protein F53F1.4 protein.
Length = 105
Score = 28.3 bits (60), Expect = 7.5
Identities = 10/22 (45%), Positives = 12/22 (54%)
Frame = -1
Query: 450 GGPCGAPRPCARCSASTVPKPP 385
GG CG P PC + + V PP
Sbjct: 65 GGGCGGPAPCGGAAPAYVAPPP 86
>Z70286-6|CAA94293.1| 3672|Caenorhabditis elegans Hypothetical protein
K08C7.3b protein.
Length = 3672
Score = 27.9 bits (59), Expect = 10.0
Identities = 11/38 (28%), Positives = 24/38 (63%)
Frame = +1
Query: 499 AVQNTVQESQKLAKKVSSNVQETNEKLAPKIXGRLRRL 612
++ VQE +KL ++ +N++ET K++ +I G+ +
Sbjct: 2584 SIDEKVQEVEKLKAEIDANIEETRAKIS-EIAGKAEEI 2620
>Z70286-5|CAB61016.1| 3704|Caenorhabditis elegans Hypothetical protein
K08C7.3a protein.
Length = 3704
Score = 27.9 bits (59), Expect = 10.0
Identities = 11/38 (28%), Positives = 24/38 (63%)
Frame = +1
Query: 499 AVQNTVQESQKLAKKVSSNVQETNEKLAPKIXGRLRRL 612
++ VQE +KL ++ +N++ET K++ +I G+ +
Sbjct: 2584 SIDEKVQEVEKLKAEIDANIEETRAKIS-EIAGKAEEI 2620
>D83173-1|BAA11828.1| 1518|Caenorhabditis elegans laminin A protein.
Length = 1518
Score = 27.9 bits (59), Expect = 10.0
Identities = 11/38 (28%), Positives = 24/38 (63%)
Frame = +1
Query: 499 AVQNTVQESQKLAKKVSSNVQETNEKLAPKIXGRLRRL 612
++ VQE +KL ++ +N++ET K++ +I G+ +
Sbjct: 398 SIDEKVQEVEKLKAEIDANIEETRAKIS-EIAGKAEEI 434
>AB016806-1|BAA32347.1| 3704|Caenorhabditis elegans laminin alpha
chain protein.
Length = 3704
Score = 27.9 bits (59), Expect = 10.0
Identities = 11/38 (28%), Positives = 24/38 (63%)
Frame = +1
Query: 499 AVQNTVQESQKLAKKVSSNVQETNEKLAPKIXGRLRRL 612
++ VQE +KL ++ +N++ET K++ +I G+ +
Sbjct: 2584 SIDEKVQEVEKLKAEIDANIEETRAKIS-EIAGKAEEI 2620
>AB001074-1|BAA19229.1| 3704|Caenorhabditis elegans laminin alpha
protein.
Length = 3704
Score = 27.9 bits (59), Expect = 10.0
Identities = 11/38 (28%), Positives = 24/38 (63%)
Frame = +1
Query: 499 AVQNTVQESQKLAKKVSSNVQETNEKLAPKIXGRLRRL 612
++ VQE +KL ++ +N++ET K++ +I G+ +
Sbjct: 2584 SIDEKVQEVEKLKAEIDANIEETRAKIS-EIAGKAEEI 2620
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,308,163
Number of Sequences: 27780
Number of extensions: 192606
Number of successful extensions: 814
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 784
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 814
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2181923744
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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