Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP17_F_B19
(841 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC041374-1|AAH41374.3| 640|Homo sapiens LRRC4C protein protein. 32 2.3
AY358293-1|AAQ88660.1| 640|Homo sapiens LNKM292 protein. 32 2.3
AL356953-4|CAI15930.1| 828|Homo sapiens leucine-rich repeat-con... 32 2.3
AF190501-1|AAG17168.1| 828|Homo sapiens leucine-rich repeat-con... 32 2.3
AB046800-1|BAB13406.1| 640|Homo sapiens KIAA1580 protein protein. 32 2.3
DQ864979-1|ABI23432.1| 193|Homo sapiens RTN4RL2 protein. 32 3.0
BC047905-1|AAH47905.2| 915|Homo sapiens leucine-rich repeat-con... 32 3.0
AY358119-1|AAQ88486.1| 915|Homo sapiens gonadotropin receptor p... 32 3.0
AL356953-5|CAI15931.1| 232|Homo sapiens leucine-rich repeat-con... 32 3.0
AL356953-3|CAI15929.1| 915|Homo sapiens leucine-rich repeat-con... 32 3.0
AL356953-1|CAI15927.1| 967|Homo sapiens leucine-rich repeat-con... 32 3.0
AB049405-1|BAB39854.1| 928|Homo sapiens VTS20631 protein. 32 3.0
BC074741-1|AAH74741.1| 345|Homo sapiens leucine-rich repeats an... 31 3.9
AF225421-1|AAG09723.1| 345|Homo sapiens HT017 protein. 31 3.9
BC142997-1|AAI42998.1| 524|Homo sapiens LGI3 protein protein. 31 5.2
BC117276-1|AAI17277.1| 420|Homo sapiens reticulon 4 receptor-li... 31 5.2
BC113673-1|AAI13674.1| 420|Homo sapiens reticulon 4 receptor-li... 31 5.2
AY250221-1|AAP82838.1| 420|Homo sapiens nogo receptor-like 3 pr... 31 5.2
AF532858-1|AAP21835.1| 420|Homo sapiens Nogo-66 receptor homolo... 31 5.2
BC040732-1|AAH40732.1| 269|Homo sapiens LRTM1 protein protein. 30 9.1
>BC041374-1|AAH41374.3| 640|Homo sapiens LRRC4C protein protein.
Length = 640
Score = 32.3 bits (70), Expect = 2.3
Identities = 34/130 (26%), Positives = 44/130 (33%)
Frame = +3
Query: 252 CPXXCXCXXSXGLXXAXCVXXXXXXXXVGVSXAVXVXXLXXXVIXXLXXFCFKXSGYXAL 431
CP C C S CV G+S + L I + FK + L
Sbjct: 47 CPSVCSC--SNQFSKVICVRKNLREVPDGISTNTRLLNLHENQIQIIKVNSFKHLRH--L 102
Query: 432 KLLXXSXXLXFWXGXXAFSGLXXLXYLNLSTXXLXXIPSDLFWXXPXLXXLXLSSXVFES 611
++L S AF+GL L L L L IP+ F L L L + ES
Sbjct: 103 EILQLSRNHIRTIEIGAFNGLANLNTLELFDNRLTTIPNGAFVYLSKLKELWLRNNPIES 162
Query: 612 LQXXPFXMPP 641
+ F P
Sbjct: 163 IPSYAFNRIP 172
>AY358293-1|AAQ88660.1| 640|Homo sapiens LNKM292 protein.
Length = 640
Score = 32.3 bits (70), Expect = 2.3
Identities = 34/130 (26%), Positives = 44/130 (33%)
Frame = +3
Query: 252 CPXXCXCXXSXGLXXAXCVXXXXXXXXVGVSXAVXVXXLXXXVIXXLXXFCFKXSGYXAL 431
CP C C S CV G+S + L I + FK + L
Sbjct: 47 CPSVCSC--SNQFSKVICVRKNLREVPDGISTNTRLLNLHENQIQIIKVNSFKHLRH--L 102
Query: 432 KLLXXSXXLXFWXGXXAFSGLXXLXYLNLSTXXLXXIPSDLFWXXPXLXXLXLSSXVFES 611
++L S AF+GL L L L L IP+ F L L L + ES
Sbjct: 103 EILQLSRNHIRTIEIGAFNGLANLNTLELFDNRLTTIPNGAFVYLSKLKELWLRNNPIES 162
Query: 612 LQXXPFXMPP 641
+ F P
Sbjct: 163 IPSYAFNRIP 172
>AL356953-4|CAI15930.1| 828|Homo sapiens leucine-rich
repeat-containing G protein-coupled receptor 6 protein.
Length = 828
Score = 32.3 bits (70), Expect = 2.3
Identities = 19/49 (38%), Positives = 23/49 (46%)
Frame = +3
Query: 480 AFSGLXXLXYLNLSTXXLXXIPSDLFWXXPXLXXLXLSSXVFESLQXXP 626
AFSGL L L L L IP++ W P L L L+ + LQ P
Sbjct: 66 AFSGLYSLKILMLQNNQLGGIPAEALWELPSLQSLDLN---YNKLQEFP 111
>AF190501-1|AAG17168.1| 828|Homo sapiens leucine-rich
repeat-containing G protein-coupled receptor 6 protein.
Length = 828
Score = 32.3 bits (70), Expect = 2.3
Identities = 19/49 (38%), Positives = 23/49 (46%)
Frame = +3
Query: 480 AFSGLXXLXYLNLSTXXLXXIPSDLFWXXPXLXXLXLSSXVFESLQXXP 626
AFSGL L L L L IP++ W P L L L+ + LQ P
Sbjct: 66 AFSGLYSLKILMLQNNQLGGIPAEALWELPSLQSLDLN---YNKLQEFP 111
>AB046800-1|BAB13406.1| 640|Homo sapiens KIAA1580 protein protein.
Length = 640
Score = 32.3 bits (70), Expect = 2.3
Identities = 34/130 (26%), Positives = 44/130 (33%)
Frame = +3
Query: 252 CPXXCXCXXSXGLXXAXCVXXXXXXXXVGVSXAVXVXXLXXXVIXXLXXFCFKXSGYXAL 431
CP C C S CV G+S + L I + FK + L
Sbjct: 47 CPSVCSC--SNQFSKVICVRKNLREVPDGISTNTRLLNLHENQIQIIKVNSFKHLRH--L 102
Query: 432 KLLXXSXXLXFWXGXXAFSGLXXLXYLNLSTXXLXXIPSDLFWXXPXLXXLXLSSXVFES 611
++L S AF+GL L L L L IP+ F L L L + ES
Sbjct: 103 EILQLSRNHIRTIEIGAFNGLANLNTLELFDNRLTTIPNGAFVYLSKLKELWLRNNPIES 162
Query: 612 LQXXPFXMPP 641
+ F P
Sbjct: 163 IPSYAFNRIP 172
>DQ864979-1|ABI23432.1| 193|Homo sapiens RTN4RL2 protein.
Length = 193
Score = 31.9 bits (69), Expect = 3.0
Identities = 18/46 (39%), Positives = 23/46 (50%)
Frame = +1
Query: 646 LQILHLHXCXLRSLPXXLFTXLPXLPXLXIXXPYXVXLXXPVLKPL 783
LQ LHL+ C L SLP +F L L L + + L P+ K L
Sbjct: 133 LQSLHLYRCQLSSLPGNIFRGLVSLQYLYLQENSLLHLQGPLPKGL 178
>BC047905-1|AAH47905.2| 915|Homo sapiens leucine-rich
repeat-containing G protein-coupled receptor 6 protein.
Length = 915
Score = 31.9 bits (69), Expect = 3.0
Identities = 17/50 (34%), Positives = 22/50 (44%)
Frame = +3
Query: 480 AFSGLXXLXYLNLSTXXLXXIPSDLFWXXPXLXXLXLSSXVFESLQXXPF 629
AFSGL L L L L IP++ W P L L L + + + F
Sbjct: 57 AFSGLYSLKILMLQNNQLGGIPAEALWELPSLQSLRLDANLISLVPERSF 106
>AY358119-1|AAQ88486.1| 915|Homo sapiens gonadotropin receptor
protein.
Length = 915
Score = 31.9 bits (69), Expect = 3.0
Identities = 17/50 (34%), Positives = 22/50 (44%)
Frame = +3
Query: 480 AFSGLXXLXYLNLSTXXLXXIPSDLFWXXPXLXXLXLSSXVFESLQXXPF 629
AFSGL L L L L IP++ W P L L L + + + F
Sbjct: 57 AFSGLYSLKILMLQNNQLGGIPAEALWELPSLQSLRLDANLISLVPERSF 106
>AL356953-5|CAI15931.1| 232|Homo sapiens leucine-rich
repeat-containing G protein-coupled receptor 6 protein.
Length = 232
Score = 31.9 bits (69), Expect = 3.0
Identities = 17/50 (34%), Positives = 22/50 (44%)
Frame = +3
Query: 480 AFSGLXXLXYLNLSTXXLXXIPSDLFWXXPXLXXLXLSSXVFESLQXXPF 629
AFSGL L L L L IP++ W P L L L + + + F
Sbjct: 35 AFSGLYSLKILMLQNNQLGGIPAEALWELPSLQSLRLDANLISLVPERSF 84
>AL356953-3|CAI15929.1| 915|Homo sapiens leucine-rich
repeat-containing G protein-coupled receptor 6 protein.
Length = 915
Score = 31.9 bits (69), Expect = 3.0
Identities = 17/50 (34%), Positives = 22/50 (44%)
Frame = +3
Query: 480 AFSGLXXLXYLNLSTXXLXXIPSDLFWXXPXLXXLXLSSXVFESLQXXPF 629
AFSGL L L L L IP++ W P L L L + + + F
Sbjct: 57 AFSGLYSLKILMLQNNQLGGIPAEALWELPSLQSLRLDANLISLVPERSF 106
>AL356953-1|CAI15927.1| 967|Homo sapiens leucine-rich
repeat-containing G protein-coupled receptor 6 protein.
Length = 967
Score = 31.9 bits (69), Expect = 3.0
Identities = 17/50 (34%), Positives = 22/50 (44%)
Frame = +3
Query: 480 AFSGLXXLXYLNLSTXXLXXIPSDLFWXXPXLXXLXLSSXVFESLQXXPF 629
AFSGL L L L L IP++ W P L L L + + + F
Sbjct: 109 AFSGLYSLKILMLQNNQLGGIPAEALWELPSLQSLRLDANLISLVPERSF 158
>AB049405-1|BAB39854.1| 928|Homo sapiens VTS20631 protein.
Length = 928
Score = 31.9 bits (69), Expect = 3.0
Identities = 17/50 (34%), Positives = 22/50 (44%)
Frame = +3
Query: 480 AFSGLXXLXYLNLSTXXLXXIPSDLFWXXPXLXXLXLSSXVFESLQXXPF 629
AFSGL L L L L IP++ W P L L L + + + F
Sbjct: 70 AFSGLYSLKILMLQNNQLGGIPAEALWELPSLQSLRLDANLISLVPERSF 119
>BC074741-1|AAH74741.1| 345|Homo sapiens leucine-rich repeats and
transmembrane domains 1 protein.
Length = 345
Score = 31.5 bits (68), Expect = 3.9
Identities = 32/115 (27%), Positives = 37/115 (32%)
Frame = +3
Query: 252 CPXXCXCXXSXGLXXAXCVXXXXXXXXVGVSXAVXVXXLXXXVIXXLXXFCFKXSGYXAL 431
CP C C S C + L I L F F+ + L
Sbjct: 21 CPDKCYCQSSTNF--VDCSQQGLAEIPSHLPPQTRTLHLQDNQIHHLPAFAFRSVPW--L 76
Query: 432 KLLXXSXXLXFWXGXXAFSGLXXLXYLNLSTXXLXXIPSDLFWXXPXLXXLXLSS 596
L S AF GL L LNL+ L + S LF P L L LSS
Sbjct: 77 MTLNLSNNSLSNLAPGAFHGLQHLQVLNLTQNSLLSLESRLFHSLPQLRELDLSS 131
>AF225421-1|AAG09723.1| 345|Homo sapiens HT017 protein.
Length = 345
Score = 31.5 bits (68), Expect = 3.9
Identities = 32/115 (27%), Positives = 37/115 (32%)
Frame = +3
Query: 252 CPXXCXCXXSXGLXXAXCVXXXXXXXXVGVSXAVXVXXLXXXVIXXLXXFCFKXSGYXAL 431
CP C C S C + L I L F F+ + L
Sbjct: 21 CPDKCYCQSSTNF--VDCSQQGLAEIPSHLPPQTRTLHLQDNQIHHLPAFAFRSVPW--L 76
Query: 432 KLLXXSXXLXFWXGXXAFSGLXXLXYLNLSTXXLXXIPSDLFWXXPXLXXLXLSS 596
L S AF GL L LNL+ L + S LF P L L LSS
Sbjct: 77 MTLNLSNNSLSNLAPGAFHGLQHLQVLNLTQNSLLSLESRLFHSLPQLRELDLSS 131
>BC142997-1|AAI42998.1| 524|Homo sapiens LGI3 protein protein.
Length = 524
Score = 31.1 bits (67), Expect = 5.2
Identities = 16/40 (40%), Positives = 21/40 (52%)
Frame = +3
Query: 471 GXXAFSGLXXLXYLNLSTXXLXXIPSDLFWXXPXLXXLXL 590
G AF+GL L YL+L+ L +P D+F L L L
Sbjct: 104 GDNAFTGLSHLQYLSLANNNLQTLPRDIFRPLDILNDLDL 143
>BC117276-1|AAI17277.1| 420|Homo sapiens reticulon 4 receptor-like
2 protein.
Length = 420
Score = 31.1 bits (67), Expect = 5.2
Identities = 18/51 (35%), Positives = 23/51 (45%)
Frame = +1
Query: 646 LQILHLHXCXLRSLPXXLFTXLPXLPXLXIXXPYXVXLXXPVLKPLNXXSH 798
LQ LHL+ C L SLP +F L L L + + L + L SH
Sbjct: 133 LQSLHLYRCQLSSLPGNIFRGLVSLQYLYLQENSLLHLQDDLFADLANLSH 183
>BC113673-1|AAI13674.1| 420|Homo sapiens reticulon 4 receptor-like
2 protein.
Length = 420
Score = 31.1 bits (67), Expect = 5.2
Identities = 18/51 (35%), Positives = 23/51 (45%)
Frame = +1
Query: 646 LQILHLHXCXLRSLPXXLFTXLPXLPXLXIXXPYXVXLXXPVLKPLNXXSH 798
LQ LHL+ C L SLP +F L L L + + L + L SH
Sbjct: 133 LQSLHLYRCQLSSLPGNIFRGLVSLQYLYLQENSLLHLQDDLFADLANLSH 183
>AY250221-1|AAP82838.1| 420|Homo sapiens nogo receptor-like 3
protein.
Length = 420
Score = 31.1 bits (67), Expect = 5.2
Identities = 18/51 (35%), Positives = 23/51 (45%)
Frame = +1
Query: 646 LQILHLHXCXLRSLPXXLFTXLPXLPXLXIXXPYXVXLXXPVLKPLNXXSH 798
LQ LHL+ C L SLP +F L L L + + L + L SH
Sbjct: 133 LQSLHLYRCQLSSLPGNIFRGLVSLQYLYLQENSLLHLQDDLFADLANLSH 183
>AF532858-1|AAP21835.1| 420|Homo sapiens Nogo-66 receptor homolog-1
protein.
Length = 420
Score = 31.1 bits (67), Expect = 5.2
Identities = 18/51 (35%), Positives = 23/51 (45%)
Frame = +1
Query: 646 LQILHLHXCXLRSLPXXLFTXLPXLPXLXIXXPYXVXLXXPVLKPLNXXSH 798
LQ LHL+ C L SLP +F L L L + + L + L SH
Sbjct: 133 LQSLHLYRCQLSSLPGNIFRGLVSLQYLYLQENSLLHLQDDLFADLANLSH 183
>BC040732-1|AAH40732.1| 269|Homo sapiens LRTM1 protein protein.
Length = 269
Score = 30.3 bits (65), Expect = 9.1
Identities = 18/39 (46%), Positives = 20/39 (51%)
Frame = +3
Query: 480 AFSGLXXLXYLNLSTXXLXXIPSDLFWXXPXLXXLXLSS 596
AF GL L LNL+ L + S LF P L L LSS
Sbjct: 17 AFHGLQHLQVLNLTQNSLLSLESRLFHSLPQLRELDLSS 55
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 38,723,641
Number of Sequences: 237096
Number of extensions: 278116
Number of successful extensions: 421
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 368
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 421
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10593928420
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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