Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP17_F_B18
(855 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BT007053-1|AAP35702.1| 134|Homo sapiens Down syndrome critical ... 52 4e-06
BC011007-1|AAH11007.1| 134|Homo sapiens phosphatidylinositol gl... 52 4e-06
BC005180-1|AAH05180.1| 134|Homo sapiens phosphatidylinositol gl... 52 4e-06
AF237812-1|AAG09757.1| 158|Homo sapiens NPD010 protein. 52 4e-06
AB039659-1|BAB12395.1| 134|Homo sapiens PIG-P protein. 52 4e-06
AB037163-1|BAA96872.1| 158|Homo sapiens DSCR5b protein. 52 4e-06
AB037162-1|BAA96871.1| 134|Homo sapiens DSCR5a protein. 52 4e-06
AB035745-1|BAA95636.1| 158|Homo sapiens DSCR5b protein. 52 4e-06
AB035744-1|BAA95635.1| 134|Homo sapiens DSCR5a3 protein. 52 4e-06
AB035743-1|BAA95634.1| 134|Homo sapiens DSCR5a2 protein. 52 4e-06
AB035742-1|BAA95633.1| 134|Homo sapiens DSCR5a1 protein. 52 4e-06
AP001727-2|BAA95512.1| 108|Homo sapiens Down syndrome critical ... 47 8e-05
AF216305-1|AAF32289.1| 108|Homo sapiens Down syndrome critical ... 47 1e-04
AB037164-1|BAA96873.1| 108|Homo sapiens DSCR5c protein. 47 1e-04
>BT007053-1|AAP35702.1| 134|Homo sapiens Down syndrome critical
region gene 5 protein.
Length = 134
Score = 51.6 bits (118), Expect = 4e-06
Identities = 26/87 (29%), Positives = 40/87 (45%)
Frame = +2
Query: 365 MPEHTPAPTPXXXXXXXXXXXXXXTXLTXFCIWAFTPXSFLXXXXXXXXPQKYWSTALPI 544
M E++P+P P + +WAF P S+L PQKYW+ ALP+
Sbjct: 1 MVENSPSPLPERAIYGFVLFLSSQFGFILYLVWAFIPESWLNSLGLTYWPQKYWAVALPV 60
Query: 545 XFLVALPVFAFLIYPSINXXLTPXIXS 625
L+A+ V +++ IN T + S
Sbjct: 61 YLLIAI-VIGYVLLFGINMMSTSPLDS 86
>BC011007-1|AAH11007.1| 134|Homo sapiens phosphatidylinositol
glycan anchor biosynthesis, class P protein.
Length = 134
Score = 51.6 bits (118), Expect = 4e-06
Identities = 26/87 (29%), Positives = 40/87 (45%)
Frame = +2
Query: 365 MPEHTPAPTPXXXXXXXXXXXXXXTXLTXFCIWAFTPXSFLXXXXXXXXPQKYWSTALPI 544
M E++P+P P + +WAF P S+L PQKYW+ ALP+
Sbjct: 1 MVENSPSPLPERAIYGFVLFLSSQFGFILYLVWAFIPESWLNSLGLTYWPQKYWAVALPV 60
Query: 545 XFLVALPVFAFLIYPSINXXLTPXIXS 625
L+A+ V +++ IN T + S
Sbjct: 61 YLLIAI-VIGYVLLFGINMMSTSPLDS 86
>BC005180-1|AAH05180.1| 134|Homo sapiens phosphatidylinositol
glycan anchor biosynthesis, class P protein.
Length = 134
Score = 51.6 bits (118), Expect = 4e-06
Identities = 26/87 (29%), Positives = 40/87 (45%)
Frame = +2
Query: 365 MPEHTPAPTPXXXXXXXXXXXXXXTXLTXFCIWAFTPXSFLXXXXXXXXPQKYWSTALPI 544
M E++P+P P + +WAF P S+L PQKYW+ ALP+
Sbjct: 1 MVENSPSPLPERAIYGFVLFLSSQFGFILYLVWAFIPESWLNSLGLTYWPQKYWAVALPV 60
Query: 545 XFLVALPVFAFLIYPSINXXLTPXIXS 625
L+A+ V +++ IN T + S
Sbjct: 61 YLLIAI-VIGYVLLFGINMMSTSPLDS 86
>AF237812-1|AAG09757.1| 158|Homo sapiens NPD010 protein.
Length = 158
Score = 51.6 bits (118), Expect = 4e-06
Identities = 26/87 (29%), Positives = 40/87 (45%)
Frame = +2
Query: 365 MPEHTPAPTPXXXXXXXXXXXXXXTXLTXFCIWAFTPXSFLXXXXXXXXPQKYWSTALPI 544
M E++P+P P + +WAF P S+L PQKYW+ ALP+
Sbjct: 25 MVENSPSPLPERAIYGFVLFLSSQFGFILYLVWAFIPESWLNSLGLTYWPQKYWAVALPV 84
Query: 545 XFLVALPVFAFLIYPSINXXLTPXIXS 625
L+A+ V +++ IN T + S
Sbjct: 85 YLLIAI-VIGYVLLFGINMMSTSPLDS 110
>AB039659-1|BAB12395.1| 134|Homo sapiens PIG-P protein.
Length = 134
Score = 51.6 bits (118), Expect = 4e-06
Identities = 26/87 (29%), Positives = 40/87 (45%)
Frame = +2
Query: 365 MPEHTPAPTPXXXXXXXXXXXXXXTXLTXFCIWAFTPXSFLXXXXXXXXPQKYWSTALPI 544
M E++P+P P + +WAF P S+L PQKYW+ ALP+
Sbjct: 1 MVENSPSPLPERAIYGFVLFLSSQFGFILYLVWAFIPESWLNSLGLTYWPQKYWAVALPV 60
Query: 545 XFLVALPVFAFLIYPSINXXLTPXIXS 625
L+A+ V +++ IN T + S
Sbjct: 61 YLLIAI-VIGYVLLFGINMMSTSPLDS 86
>AB037163-1|BAA96872.1| 158|Homo sapiens DSCR5b protein.
Length = 158
Score = 51.6 bits (118), Expect = 4e-06
Identities = 26/87 (29%), Positives = 40/87 (45%)
Frame = +2
Query: 365 MPEHTPAPTPXXXXXXXXXXXXXXTXLTXFCIWAFTPXSFLXXXXXXXXPQKYWSTALPI 544
M E++P+P P + +WAF P S+L PQKYW+ ALP+
Sbjct: 25 MVENSPSPLPERAIYGFVLFLSSQFGFILYLVWAFIPESWLNSLGLTYWPQKYWAVALPV 84
Query: 545 XFLVALPVFAFLIYPSINXXLTPXIXS 625
L+A+ V +++ IN T + S
Sbjct: 85 YLLIAI-VIGYVLLFGINMMSTSPLDS 110
>AB037162-1|BAA96871.1| 134|Homo sapiens DSCR5a protein.
Length = 134
Score = 51.6 bits (118), Expect = 4e-06
Identities = 26/87 (29%), Positives = 40/87 (45%)
Frame = +2
Query: 365 MPEHTPAPTPXXXXXXXXXXXXXXTXLTXFCIWAFTPXSFLXXXXXXXXPQKYWSTALPI 544
M E++P+P P + +WAF P S+L PQKYW+ ALP+
Sbjct: 1 MVENSPSPLPERAIYGFVLFLSSQFGFILYLVWAFIPESWLNSLGLTYWPQKYWAVALPV 60
Query: 545 XFLVALPVFAFLIYPSINXXLTPXIXS 625
L+A+ V +++ IN T + S
Sbjct: 61 YLLIAI-VIGYVLLFGINMMSTSPLDS 86
>AB035745-1|BAA95636.1| 158|Homo sapiens DSCR5b protein.
Length = 158
Score = 51.6 bits (118), Expect = 4e-06
Identities = 26/87 (29%), Positives = 40/87 (45%)
Frame = +2
Query: 365 MPEHTPAPTPXXXXXXXXXXXXXXTXLTXFCIWAFTPXSFLXXXXXXXXPQKYWSTALPI 544
M E++P+P P + +WAF P S+L PQKYW+ ALP+
Sbjct: 25 MVENSPSPLPERAIYGFVLFLSSQFGFILYLVWAFIPESWLNSLGLTYWPQKYWAVALPV 84
Query: 545 XFLVALPVFAFLIYPSINXXLTPXIXS 625
L+A+ V +++ IN T + S
Sbjct: 85 YLLIAI-VIGYVLLFGINMMSTSPLDS 110
>AB035744-1|BAA95635.1| 134|Homo sapiens DSCR5a3 protein.
Length = 134
Score = 51.6 bits (118), Expect = 4e-06
Identities = 26/87 (29%), Positives = 40/87 (45%)
Frame = +2
Query: 365 MPEHTPAPTPXXXXXXXXXXXXXXTXLTXFCIWAFTPXSFLXXXXXXXXPQKYWSTALPI 544
M E++P+P P + +WAF P S+L PQKYW+ ALP+
Sbjct: 1 MVENSPSPLPERAIYGFVLFLSSQFGFILYLVWAFIPESWLNSLGLTYWPQKYWAVALPV 60
Query: 545 XFLVALPVFAFLIYPSINXXLTPXIXS 625
L+A+ V +++ IN T + S
Sbjct: 61 YLLIAI-VIGYVLLFGINMMSTSPLDS 86
>AB035743-1|BAA95634.1| 134|Homo sapiens DSCR5a2 protein.
Length = 134
Score = 51.6 bits (118), Expect = 4e-06
Identities = 26/87 (29%), Positives = 40/87 (45%)
Frame = +2
Query: 365 MPEHTPAPTPXXXXXXXXXXXXXXTXLTXFCIWAFTPXSFLXXXXXXXXPQKYWSTALPI 544
M E++P+P P + +WAF P S+L PQKYW+ ALP+
Sbjct: 1 MVENSPSPLPERAIYGFVLFLSSQFGFILYLVWAFIPESWLNSLGLTYWPQKYWAVALPV 60
Query: 545 XFLVALPVFAFLIYPSINXXLTPXIXS 625
L+A+ V +++ IN T + S
Sbjct: 61 YLLIAI-VIGYVLLFGINMMSTSPLDS 86
>AB035742-1|BAA95633.1| 134|Homo sapiens DSCR5a1 protein.
Length = 134
Score = 51.6 bits (118), Expect = 4e-06
Identities = 26/87 (29%), Positives = 40/87 (45%)
Frame = +2
Query: 365 MPEHTPAPTPXXXXXXXXXXXXXXTXLTXFCIWAFTPXSFLXXXXXXXXPQKYWSTALPI 544
M E++P+P P + +WAF P S+L PQKYW+ ALP+
Sbjct: 1 MVENSPSPLPERAIYGFVLFLSSQFGFILYLVWAFIPESWLNSLGLTYWPQKYWAVALPV 60
Query: 545 XFLVALPVFAFLIYPSINXXLTPXIXS 625
L+A+ V +++ IN T + S
Sbjct: 61 YLLIAI-VIGYVLLFGINMMSTSPLDS 86
>AP001727-2|BAA95512.1| 108|Homo sapiens Down syndrome critical
region protein C protein.
Length = 108
Score = 47.2 bits (107), Expect = 8e-05
Identities = 21/61 (34%), Positives = 33/61 (54%)
Frame = +2
Query: 443 LTXFCIWAFTPXSFLXXXXXXXXPQKYWSTALPIXFLVALPVFAFLIYPSINXXLTPXIX 622
+ + +WAF P S+L PQKYW+ ALP+ L+A+ V +++ IN T +
Sbjct: 1 MVLYLVWAFIPESWLNSLGLTYWPQKYWAVALPVYLLIAI-VIGYVLLFGINMMSTSPLD 59
Query: 623 S 625
S
Sbjct: 60 S 60
>AF216305-1|AAF32289.1| 108|Homo sapiens Down syndrome critical
region protein C short form protein.
Length = 108
Score = 46.8 bits (106), Expect = 1e-04
Identities = 21/61 (34%), Positives = 33/61 (54%)
Frame = +2
Query: 443 LTXFCIWAFTPXSFLXXXXXXXXPQKYWSTALPIXFLVALPVFAFLIYPSINXXLTPXIX 622
+ + +WAF P S+L PQKYW+ ALP+ L+A+ V +++ IN T +
Sbjct: 1 MVLYLVWAFIPESWLNSLGLTYWPQKYWAVALPVYLLIAV-VIGYVLLFGINMMSTSPLD 59
Query: 623 S 625
S
Sbjct: 60 S 60
>AB037164-1|BAA96873.1| 108|Homo sapiens DSCR5c protein.
Length = 108
Score = 46.8 bits (106), Expect = 1e-04
Identities = 21/61 (34%), Positives = 33/61 (54%)
Frame = +2
Query: 443 LTXFCIWAFTPXSFLXXXXXXXXPQKYWSTALPIXFLVALPVFAFLIYPSINXXLTPXIX 622
+ + +WAF P S+L PQKYW+ ALP+ L+A+ V +++ IN T +
Sbjct: 1 MVLYLVWAFIPESWLNSLGLTYWPQKYWAVALPVYLLIAV-VIGYVLLFGINMMSTSPLD 59
Query: 623 S 625
S
Sbjct: 60 S 60
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 50,940,486
Number of Sequences: 237096
Number of extensions: 474153
Number of successful extensions: 290
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 290
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 290
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10872716010
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -