Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP17_F_B18
         (855 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY118873-1|AAM50733.1|  158|Drosophila melanogaster GM30016p pro...    57   4e-08
AE014297-3915|AAF56563.2|  158|Drosophila melanogaster CG14550-P...    57   4e-08

>AY118873-1|AAM50733.1|  158|Drosophila melanogaster GM30016p
           protein.
          Length = 158

 Score = 56.8 bits (131), Expect = 4e-08
 Identities = 31/87 (35%), Positives = 38/87 (43%)
 Frame = +2

Query: 365 MPEHTPAPTPXXXXXXXXXXXXXXTXLTXFCIWAFTPXSFLXXXXXXXXPQKYWSTALPI 544
           MPEHTPAPTP                   +  WA  P  F         P KY++  +P 
Sbjct: 1   MPEHTPAPTPHRAVYGFAFYMLFTVLFLVYVTWALLPVEF---GLHSYLPDKYFAVFVPF 57

Query: 545 XFLVALPVFAFLIYPSINXXLTPXIXS 625
             LV    FAFLIYP+IN  +T  + S
Sbjct: 58  LVLVFAWFFAFLIYPAINLSMTVDVDS 84


>AE014297-3915|AAF56563.2|  158|Drosophila melanogaster CG14550-PA
           protein.
          Length = 158

 Score = 56.8 bits (131), Expect = 4e-08
 Identities = 31/87 (35%), Positives = 38/87 (43%)
 Frame = +2

Query: 365 MPEHTPAPTPXXXXXXXXXXXXXXTXLTXFCIWAFTPXSFLXXXXXXXXPQKYWSTALPI 544
           MPEHTPAPTP                   +  WA  P  F         P KY++  +P 
Sbjct: 1   MPEHTPAPTPHRAVYGFAFYMLFTVLFLVYVTWALLPVEF---GLHSYLPDKYFAVFVPF 57

Query: 545 XFLVALPVFAFLIYPSINXXLTPXIXS 625
             LV    FAFLIYP+IN  +T  + S
Sbjct: 58  LVLVFAWFFAFLIYPAINLSMTVDVDS 84


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,990,284
Number of Sequences: 53049
Number of extensions: 127272
Number of successful extensions: 75
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 73
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 73
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 4106450400
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)