Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP17_F_B17
         (874 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

01_01_0046 - 331758-332627                                             29   3.7  
03_05_0890 - 28547462-28547545,28548451-28548528,28548641-285488...    29   6.4  

>01_01_0046 - 331758-332627
          Length = 289

 Score = 29.5 bits (63), Expect = 3.7
 Identities = 11/24 (45%), Positives = 12/24 (50%)
 Frame = +2

Query: 749 PRXXRFGYWXPXPXPXPXPPXXPS 820
           P+   F YW   P P P PP  PS
Sbjct: 10  PQRYWFPYWTSPPPPPPPPPPPPS 33


>03_05_0890 -
           28547462-28547545,28548451-28548528,28548641-28548814,
           28548902-28548958,28549065-28549116,28549907-28549995,
           28550259-28550344,28550427-28550637,28551790-28551882,
           28551958-28552098,28552175-28552267,28553879-28554113,
           28554263-28554435,28555234-28556571,28556668-28556853,
           28557625-28557713,28557756-28557905,28557951-28558596
          Length = 1324

 Score = 28.7 bits (61), Expect = 6.4
 Identities = 10/24 (41%), Positives = 11/24 (45%)
 Frame = +2

Query: 749 PRXXRFGYWXPXPXPXPXPPXXPS 820
           P   R   W P P P P PP  P+
Sbjct: 548 PTRERISSWKPFPSPVPKPPKDPT 571


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,314,767
Number of Sequences: 37544
Number of extensions: 106545
Number of successful extensions: 490
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 350
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 470
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2456227356
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)