Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP17_F_B17
(874 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z92815-4|CAB07294.2| 2175|Caenorhabditis elegans Hypothetical pr... 32 0.47
Z71180-3|CAA94892.2| 763|Caenorhabditis elegans Hypothetical pr... 31 0.81
AL021474-7|CAA16311.2| 763|Caenorhabditis elegans Hypothetical ... 31 0.81
U64857-3|AAM29666.1| 1487|Caenorhabditis elegans Hypothetical pr... 31 1.1
U64857-2|AAC25867.1| 1558|Caenorhabditis elegans Hypothetical pr... 31 1.1
U64857-1|AAC25868.1| 2167|Caenorhabditis elegans Hypothetical pr... 31 1.1
AF067945-11|AAV28330.1| 1604|Caenorhabditis elegans Mechanosenso... 30 2.5
AF067945-10|AAV28329.1| 1818|Caenorhabditis elegans Mechanosenso... 30 2.5
AF067945-9|AAV28328.1| 1954|Caenorhabditis elegans Mechanosensor... 30 2.5
AF067945-4|AAV28327.1| 1995|Caenorhabditis elegans Mechanosensor... 30 2.5
AF067945-3|AAV28331.1| 2006|Caenorhabditis elegans Mechanosensor... 30 2.5
AF067945-2|AAV28324.1| 2007|Caenorhabditis elegans Mechanosensor... 30 2.5
Z73971-10|CAA98251.1| 838|Caenorhabditis elegans Hypothetical p... 29 4.3
U33934-1|AAA96507.1| 838|Caenorhabditis elegans MEC-9L protein. 29 4.3
U33933-1|AAA96506.1| 838|Caenorhabditis elegans MEC-9L protein. 29 4.3
AF067945-5|AAV28325.1| 1685|Caenorhabditis elegans Mechanosensor... 29 5.7
Z81479-1|CAB03944.1| 1043|Caenorhabditis elegans Hypothetical pr... 28 7.6
>Z92815-4|CAB07294.2| 2175|Caenorhabditis elegans Hypothetical
protein W01F3.3 protein.
Length = 2175
Score = 32.3 bits (70), Expect = 0.47
Identities = 15/52 (28%), Positives = 18/52 (34%)
Frame = +3
Query: 192 AGLCFGXMXLXSXXXXXXXCXXFXYGGCXGXXXRFXXLAXCXXXCXXXLXXS 347
AG C G + C F YGGC G F + C C + S
Sbjct: 810 AGECNGVFERFAFDAEAQDCRAFTYGGCGGNGNNFATMQECRSRCVMAMKKS 861
Score = 31.5 bits (68), Expect = 0.81
Identities = 14/44 (31%), Positives = 15/44 (34%)
Frame = +3
Query: 195 GLCFGXMXLXSXXXXXXXCXXFXYGGCXGXXXRFXXLAXCXXXC 326
G C G + C F YGGC G F L C C
Sbjct: 873 GECAGVFSRFAFDKSINACRSFTYGGCGGNANNFATLQECTNKC 916
>Z71180-3|CAA94892.2| 763|Caenorhabditis elegans Hypothetical
protein F22E12.1 protein.
Length = 763
Score = 31.5 bits (68), Expect = 0.81
Identities = 12/26 (46%), Positives = 12/26 (46%)
Frame = +3
Query: 249 CXXFXYGGCXGXXXRFXXLAXCXXXC 326
C F YGGC G RF L C C
Sbjct: 51 CRRFFYGGCEGNENRFDSLEECSSQC 76
>AL021474-7|CAA16311.2| 763|Caenorhabditis elegans Hypothetical
protein F22E12.1 protein.
Length = 763
Score = 31.5 bits (68), Expect = 0.81
Identities = 12/26 (46%), Positives = 12/26 (46%)
Frame = +3
Query: 249 CXXFXYGGCXGXXXRFXXLAXCXXXC 326
C F YGGC G RF L C C
Sbjct: 51 CRRFFYGGCEGNENRFDSLEECSSQC 76
>U64857-3|AAM29666.1| 1487|Caenorhabditis elegans Hypothetical protein
C37C3.6c protein.
Length = 1487
Score = 31.1 bits (67), Expect = 1.1
Identities = 14/44 (31%), Positives = 15/44 (34%)
Frame = +3
Query: 195 GLCFGXMXLXSXXXXXXXCXXFXYGGCXGXXXRFXXLAXCXXXC 326
G C G C F YGGC G RF + C C
Sbjct: 1440 GPCSGKHSYYYYNTASHQCETFTYGGCLGNTNRFATIEECQARC 1483
Score = 28.7 bits (61), Expect = 5.7
Identities = 11/26 (42%), Positives = 11/26 (42%)
Frame = +3
Query: 249 CXXFXYGGCXGXXXRFXXLAXCXXXC 326
C F YGGC G RF C C
Sbjct: 1296 CETFTYGGCGGNLNRFRSKDECEQRC 1321
Score = 28.7 bits (61), Expect = 5.7
Identities = 11/26 (42%), Positives = 11/26 (42%)
Frame = +3
Query: 249 CXXFXYGGCXGXXXRFXXLAXCXXXC 326
C F YGGC G RF C C
Sbjct: 1401 CNRFHYGGCQGTNNRFDNEQQCKAAC 1426
>U64857-2|AAC25867.1| 1558|Caenorhabditis elegans Hypothetical protein
C37C3.6a protein.
Length = 1558
Score = 31.1 bits (67), Expect = 1.1
Identities = 14/44 (31%), Positives = 15/44 (34%)
Frame = +3
Query: 195 GLCFGXMXLXSXXXXXXXCXXFXYGGCXGXXXRFXXLAXCXXXC 326
G C G C F YGGC G RF + C C
Sbjct: 1511 GPCSGKHSYYYYNTASHQCETFTYGGCLGNTNRFATIEECQARC 1554
Score = 28.7 bits (61), Expect = 5.7
Identities = 11/26 (42%), Positives = 11/26 (42%)
Frame = +3
Query: 249 CXXFXYGGCXGXXXRFXXLAXCXXXC 326
C F YGGC G RF C C
Sbjct: 1296 CETFTYGGCGGNLNRFRSKDECEQRC 1321
Score = 28.7 bits (61), Expect = 5.7
Identities = 11/26 (42%), Positives = 11/26 (42%)
Frame = +3
Query: 249 CXXFXYGGCXGXXXRFXXLAXCXXXC 326
C F YGGC G RF C C
Sbjct: 1472 CNRFHYGGCQGTNNRFDNEQQCKAAC 1497
>U64857-1|AAC25868.1| 2167|Caenorhabditis elegans Hypothetical protein
C37C3.6b protein.
Length = 2167
Score = 31.1 bits (67), Expect = 1.1
Identities = 14/44 (31%), Positives = 15/44 (34%)
Frame = +3
Query: 195 GLCFGXMXLXSXXXXXXXCXXFXYGGCXGXXXRFXXLAXCXXXC 326
G C G C F YGGC G RF + C C
Sbjct: 1511 GPCSGKHSYYYYNTASHQCETFTYGGCLGNTNRFATIEECQARC 1554
Score = 30.7 bits (66), Expect = 1.4
Identities = 14/45 (31%), Positives = 16/45 (35%)
Frame = +3
Query: 192 AGLCFGXMXLXSXXXXXXXCXXFXYGGCXGXXXRFXXLAXCXXXC 326
AG C + + C F YGGC G RF C C
Sbjct: 1859 AGPCTDSISMWYFDSTHLDCKPFTYGGCRGNQNRFVSKEQCQQSC 1903
Score = 28.7 bits (61), Expect = 5.7
Identities = 11/26 (42%), Positives = 11/26 (42%)
Frame = +3
Query: 249 CXXFXYGGCXGXXXRFXXLAXCXXXC 326
C F YGGC G RF C C
Sbjct: 1296 CETFTYGGCGGNLNRFRSKDECEQRC 1321
Score = 28.7 bits (61), Expect = 5.7
Identities = 11/26 (42%), Positives = 11/26 (42%)
Frame = +3
Query: 249 CXXFXYGGCXGXXXRFXXLAXCXXXC 326
C F YGGC G RF C C
Sbjct: 1472 CNRFHYGGCQGTNNRFDNEQQCKAAC 1497
Score = 28.7 bits (61), Expect = 5.7
Identities = 11/26 (42%), Positives = 11/26 (42%)
Frame = +3
Query: 249 CXXFXYGGCXGXXXRFXXLAXCXXXC 326
C F YGGC G RF C C
Sbjct: 1646 CRQFYYGGCAGNTNRFETRDKCETSC 1671
Score = 28.7 bits (61), Expect = 5.7
Identities = 11/26 (42%), Positives = 11/26 (42%)
Frame = +3
Query: 249 CXXFXYGGCXGXXXRFXXLAXCXXXC 326
C F YGGC G RF C C
Sbjct: 1939 CHMFHYGGCEGNANRFDSELDCFRRC 1964
>AF067945-11|AAV28330.1| 1604|Caenorhabditis elegans Mechanosensory
abnormality protein1, isoform g protein.
Length = 1604
Score = 29.9 bits (64), Expect = 2.5
Identities = 11/26 (42%), Positives = 11/26 (42%)
Frame = +3
Query: 249 CXXFXYGGCXGXXXRFXXLAXCXXXC 326
C F YGGC G RF C C
Sbjct: 1362 CDQFLYGGCGGNPNRFDTFEICQKAC 1387
Score = 28.7 bits (61), Expect = 5.7
Identities = 10/26 (38%), Positives = 12/26 (46%)
Frame = +3
Query: 249 CXXFXYGGCXGXXXRFXXLAXCXXXC 326
C F Y GC G RF ++ C C
Sbjct: 1156 CRPFAYSGCGGNSNRFMTVSQCENLC 1181
>AF067945-10|AAV28329.1| 1818|Caenorhabditis elegans Mechanosensory
abnormality protein1, isoform f protein.
Length = 1818
Score = 29.9 bits (64), Expect = 2.5
Identities = 11/26 (42%), Positives = 11/26 (42%)
Frame = +3
Query: 249 CXXFXYGGCXGXXXRFXXLAXCXXXC 326
C F YGGC G RF C C
Sbjct: 1576 CDQFLYGGCGGNPNRFDTFEICQKAC 1601
Score = 28.7 bits (61), Expect = 5.7
Identities = 10/26 (38%), Positives = 12/26 (46%)
Frame = +3
Query: 249 CXXFXYGGCXGXXXRFXXLAXCXXXC 326
C F Y GC G RF ++ C C
Sbjct: 1370 CRPFAYSGCGGNSNRFMTVSQCENLC 1395
>AF067945-9|AAV28328.1| 1954|Caenorhabditis elegans Mechanosensory
abnormality protein1, isoform e protein.
Length = 1954
Score = 29.9 bits (64), Expect = 2.5
Identities = 11/26 (42%), Positives = 11/26 (42%)
Frame = +3
Query: 249 CXXFXYGGCXGXXXRFXXLAXCXXXC 326
C F YGGC G RF C C
Sbjct: 1712 CDQFLYGGCGGNPNRFDTFEICQKAC 1737
Score = 28.7 bits (61), Expect = 5.7
Identities = 10/26 (38%), Positives = 12/26 (46%)
Frame = +3
Query: 249 CXXFXYGGCXGXXXRFXXLAXCXXXC 326
C F Y GC G RF ++ C C
Sbjct: 1506 CRPFAYSGCGGNSNRFMTVSQCENLC 1531
>AF067945-4|AAV28327.1| 1995|Caenorhabditis elegans Mechanosensory
abnormality protein1, isoform d protein.
Length = 1995
Score = 29.9 bits (64), Expect = 2.5
Identities = 11/26 (42%), Positives = 11/26 (42%)
Frame = +3
Query: 249 CXXFXYGGCXGXXXRFXXLAXCXXXC 326
C F YGGC G RF C C
Sbjct: 1753 CDQFLYGGCGGNPNRFDTFEICQKAC 1778
Score = 28.7 bits (61), Expect = 5.7
Identities = 10/26 (38%), Positives = 12/26 (46%)
Frame = +3
Query: 249 CXXFXYGGCXGXXXRFXXLAXCXXXC 326
C F Y GC G RF ++ C C
Sbjct: 1547 CRPFAYSGCGGNSNRFMTVSQCENLC 1572
>AF067945-3|AAV28331.1| 2006|Caenorhabditis elegans Mechanosensory
abnormality protein1, isoform h protein.
Length = 2006
Score = 29.9 bits (64), Expect = 2.5
Identities = 11/26 (42%), Positives = 11/26 (42%)
Frame = +3
Query: 249 CXXFXYGGCXGXXXRFXXLAXCXXXC 326
C F YGGC G RF C C
Sbjct: 1764 CDQFLYGGCGGNPNRFDTFEICQKAC 1789
Score = 28.7 bits (61), Expect = 5.7
Identities = 10/26 (38%), Positives = 12/26 (46%)
Frame = +3
Query: 249 CXXFXYGGCXGXXXRFXXLAXCXXXC 326
C F Y GC G RF ++ C C
Sbjct: 1558 CRPFAYSGCGGNSNRFMTVSQCENLC 1583
>AF067945-2|AAV28324.1| 2007|Caenorhabditis elegans Mechanosensory
abnormality protein1, isoform a protein.
Length = 2007
Score = 29.9 bits (64), Expect = 2.5
Identities = 11/26 (42%), Positives = 11/26 (42%)
Frame = +3
Query: 249 CXXFXYGGCXGXXXRFXXLAXCXXXC 326
C F YGGC G RF C C
Sbjct: 1765 CDQFLYGGCGGNPNRFDTFEICQKAC 1790
Score = 28.7 bits (61), Expect = 5.7
Identities = 10/26 (38%), Positives = 12/26 (46%)
Frame = +3
Query: 249 CXXFXYGGCXGXXXRFXXLAXCXXXC 326
C F Y GC G RF ++ C C
Sbjct: 1559 CRPFAYSGCGGNSNRFMTVSQCENLC 1584
>Z73971-10|CAA98251.1| 838|Caenorhabditis elegans Hypothetical
protein C50H2.3 protein.
Length = 838
Score = 29.1 bits (62), Expect = 4.3
Identities = 11/26 (42%), Positives = 11/26 (42%)
Frame = +3
Query: 249 CXXFXYGGCXGXXXRFXXLAXCXXXC 326
C F YGGC G RF C C
Sbjct: 61 CKEFHYGGCMGTKNRFSSKQQCVKQC 86
>U33934-1|AAA96507.1| 838|Caenorhabditis elegans MEC-9L protein.
Length = 838
Score = 29.1 bits (62), Expect = 4.3
Identities = 11/26 (42%), Positives = 11/26 (42%)
Frame = +3
Query: 249 CXXFXYGGCXGXXXRFXXLAXCXXXC 326
C F YGGC G RF C C
Sbjct: 61 CKEFHYGGCMGTKNRFSSKQQCVKQC 86
>U33933-1|AAA96506.1| 838|Caenorhabditis elegans MEC-9L protein.
Length = 838
Score = 29.1 bits (62), Expect = 4.3
Identities = 11/26 (42%), Positives = 11/26 (42%)
Frame = +3
Query: 249 CXXFXYGGCXGXXXRFXXLAXCXXXC 326
C F YGGC G RF C C
Sbjct: 61 CKEFHYGGCMGTKNRFSSKQQCVKQC 86
>AF067945-5|AAV28325.1| 1685|Caenorhabditis elegans Mechanosensory
abnormality protein1, isoform b protein.
Length = 1685
Score = 28.7 bits (61), Expect = 5.7
Identities = 10/26 (38%), Positives = 12/26 (46%)
Frame = +3
Query: 249 CXXFXYGGCXGXXXRFXXLAXCXXXC 326
C F Y GC G RF ++ C C
Sbjct: 1555 CRPFAYSGCGGNSNRFMTVSQCENLC 1580
>Z81479-1|CAB03944.1| 1043|Caenorhabditis elegans Hypothetical protein
C34F6.1 protein.
Length = 1043
Score = 28.3 bits (60), Expect = 7.6
Identities = 10/26 (38%), Positives = 11/26 (42%)
Frame = +3
Query: 249 CXXFXYGGCXGXXXRFXXLAXCXXXC 326
C + YGGC G F L C C
Sbjct: 1008 CVEYQYGGCEGTLNNFHSLQRCTEIC 1033
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,891,118
Number of Sequences: 27780
Number of extensions: 72435
Number of successful extensions: 307
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 180
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 304
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2192413762
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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