Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP17_F_B16
         (920 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X13382-1|CAA31759.1|  407|Drosophila melanogaster protein ( Dros...   129   5e-30
BT025959-1|ABG02203.1|  233|Drosophila melanogaster IP15855p pro...   129   5e-30
AY069485-1|AAL39630.1|  401|Drosophila melanogaster LD21756p pro...   129   5e-30
AE014297-4196|AAG22173.1|  401|Drosophila melanogaster CG5502-PA...   129   5e-30
X06881-1|CAA29998.1|  123|Drosophila melanogaster protein ( Dros...    77   5e-14
AY113210-1|AAM29215.1|  872|Drosophila melanogaster AT06220p pro...    31   2.9  
AE014296-2188|AAF49882.2|  271|Drosophila melanogaster CG17666-P...    31   2.9  
AE014296-2187|AAN11857.1|  872|Drosophila melanogaster CG17666-P...    31   2.9  

>X13382-1|CAA31759.1|  407|Drosophila melanogaster protein (
           Drosophila melanogastermRNA for put. ribosomal protein
           L1. ).
          Length = 407

 Score =  129 bits (312), Expect = 5e-30
 Identities = 83/197 (42%), Positives = 99/197 (50%), Gaps = 1/197 (0%)
 Frame = +2

Query: 149 MXLSVARPLXVGVLXXAXXGAGXXPSPSRFVFKAPIRPDLVNDVHVSMSKNSRXPYCVSX 328
           M L  ARPL V V       A         VFKAPIRPD+VN+VH  + +N+R  Y VS 
Sbjct: 1   MSLGNARPL-VSVYTEKNEPAKDKNICLPAVFKAPIRPDVVNEVHQLLRRNNRQAYAVSE 59

Query: 329 EAGXQTSAESWGTGRAVARIPXXXXXXXXXXXXXXXXXXXXXXRMFAPTKPWXXXXXXXX 508
            AG QTSAESWGTGRAVARIP                      RMFAPTK +        
Sbjct: 60  LAGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTFRRWHRKVN 119

Query: 509 XXXXRXXXXXXXXXTGVQXSFRLXXXLLTRF-RASLVVADQVQEIXKXKXAVIFLRRLKA 685
               R         +GV    +    ++       LVV+D+VQ++ K K AVIFLRRLK 
Sbjct: 120 VNQRRYALVSAIAASGVPALVQSKGHVIDGVSEFPLVVSDEVQKVQKTKQAVIFLRRLKI 179

Query: 686 WSDILKVYXSXXLRAGK 736
           W+DI KVY S   RAG+
Sbjct: 180 WADIQKVYKSQRFRAGR 196


>BT025959-1|ABG02203.1|  233|Drosophila melanogaster IP15855p
           protein.
          Length = 233

 Score =  129 bits (312), Expect = 5e-30
 Identities = 83/197 (42%), Positives = 99/197 (50%), Gaps = 1/197 (0%)
 Frame = +2

Query: 149 MXLSVARPLXVGVLXXAXXGAGXXPSPSRFVFKAPIRPDLVNDVHVSMSKNSRXPYCVSX 328
           M L  ARPL V V       A         VFKAPIRPD+VN+VH  + +N+R  Y VS 
Sbjct: 1   MSLGNARPL-VSVYTEKNEPAKDKNICLPAVFKAPIRPDVVNEVHQLLRRNNRQAYAVSE 59

Query: 329 EAGXQTSAESWGTGRAVARIPXXXXXXXXXXXXXXXXXXXXXXRMFAPTKPWXXXXXXXX 508
            AG QTSAESWGTGRAVARIP                      RMFAPTK +        
Sbjct: 60  LAGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTFRRWHRKVN 119

Query: 509 XXXXRXXXXXXXXXTGVQXSFRLXXXLLTRF-RASLVVADQVQEIXKXKXAVIFLRRLKA 685
               R         +GV    +    ++       LVV+D+VQ++ K K AVIFLRRLK 
Sbjct: 120 VNQRRYALVSAIAASGVPALVQSKGHVIDGVSEFPLVVSDEVQKVQKTKQAVIFLRRLKI 179

Query: 686 WSDILKVYXSXXLRAGK 736
           W+DI KVY S   RAG+
Sbjct: 180 WADIQKVYKSQRFRAGR 196


>AY069485-1|AAL39630.1|  401|Drosophila melanogaster LD21756p
           protein.
          Length = 401

 Score =  129 bits (312), Expect = 5e-30
 Identities = 83/197 (42%), Positives = 99/197 (50%), Gaps = 1/197 (0%)
 Frame = +2

Query: 149 MXLSVARPLXVGVLXXAXXGAGXXPSPSRFVFKAPIRPDLVNDVHVSMSKNSRXPYCVSX 328
           M L  ARPL V V       A         VFKAPIRPD+VN+VH  + +N+R  Y VS 
Sbjct: 1   MSLGNARPL-VSVYTEKNEPAKDKNICLPAVFKAPIRPDVVNEVHQLLRRNNRQAYAVSE 59

Query: 329 EAGXQTSAESWGTGRAVARIPXXXXXXXXXXXXXXXXXXXXXXRMFAPTKPWXXXXXXXX 508
            AG QTSAESWGTGRAVARIP                      RMFAPTK +        
Sbjct: 60  LAGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTFRRWHRKVN 119

Query: 509 XXXXRXXXXXXXXXTGVQXSFRLXXXLLTRF-RASLVVADQVQEIXKXKXAVIFLRRLKA 685
               R         +GV    +    ++       LVV+D+VQ++ K K AVIFLRRLK 
Sbjct: 120 VNQRRYALVSAIAASGVPALVQSKGHVIDGVSEFPLVVSDEVQKVQKTKQAVIFLRRLKI 179

Query: 686 WSDILKVYXSXXLRAGK 736
           W+DI KVY S   RAG+
Sbjct: 180 WADIQKVYKSQRFRAGR 196


>AE014297-4196|AAG22173.1|  401|Drosophila melanogaster CG5502-PA
           protein.
          Length = 401

 Score =  129 bits (312), Expect = 5e-30
 Identities = 83/197 (42%), Positives = 99/197 (50%), Gaps = 1/197 (0%)
 Frame = +2

Query: 149 MXLSVARPLXVGVLXXAXXGAGXXPSPSRFVFKAPIRPDLVNDVHVSMSKNSRXPYCVSX 328
           M L  ARPL V V       A         VFKAPIRPD+VN+VH  + +N+R  Y VS 
Sbjct: 1   MSLGNARPL-VSVYTEKNEPAKDKNICLPAVFKAPIRPDVVNEVHQLLRRNNRQAYAVSE 59

Query: 329 EAGXQTSAESWGTGRAVARIPXXXXXXXXXXXXXXXXXXXXXXRMFAPTKPWXXXXXXXX 508
            AG QTSAESWGTGRAVARIP                      RMFAPTK +        
Sbjct: 60  LAGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTFRRWHRKVN 119

Query: 509 XXXXRXXXXXXXXXTGVQXSFRLXXXLLTRF-RASLVVADQVQEIXKXKXAVIFLRRLKA 685
               R         +GV    +    ++       LVV+D+VQ++ K K AVIFLRRLK 
Sbjct: 120 VNQRRYALVSAIAASGVPALVQSKGHVIDGVSEFPLVVSDEVQKVQKTKQAVIFLRRLKI 179

Query: 686 WSDILKVYXSXXLRAGK 736
           W+DI KVY S   RAG+
Sbjct: 180 WADIQKVYKSQRFRAGR 196


>X06881-1|CAA29998.1|  123|Drosophila melanogaster protein (
           Drosophila gene forribosomal protein L1 fragment. ).
          Length = 123

 Score = 76.6 bits (180), Expect = 5e-14
 Identities = 48/122 (39%), Positives = 58/122 (47%), Gaps = 1/122 (0%)
 Frame = +2

Query: 341 QTSAESWGTGRAVARIPXXXXXXXXXXXXXXXXXXXXXXRMFAPTKPWXXXXXXXXXXXX 520
           QTSAESWGTGRAVARIP                      RMFAPTK +            
Sbjct: 2   QTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTFRRWHRRVNVNQR 61

Query: 521 RXXXXXXXXXTGVQXSFRLXXXLLTRFRA-SLVVADQVQEIXKXKXAVIFLRRLKAWSDI 697
           R         +GV    +    ++       LVV+D+VQ++ K K AVIFLRRLK W+DI
Sbjct: 62  RYALVSAIAASGVPALVQSKGHVIDGVSEFPLVVSDEVQKVQKTKQAVIFLRRLKIWADI 121

Query: 698 LK 703
            K
Sbjct: 122 QK 123


>AY113210-1|AAM29215.1|  872|Drosophila melanogaster AT06220p
           protein.
          Length = 872

 Score = 30.7 bits (66), Expect = 2.9
 Identities = 11/22 (50%), Positives = 14/22 (63%), Gaps = 1/22 (4%)
 Frame = +1

Query: 370 TCCRP-NSACPWWWYS*VRSGC 432
           TCC P ++ CPW WY    +GC
Sbjct: 718 TCCMPCSNQCPWSWYYNPCTGC 739


>AE014296-2188|AAF49882.2|  271|Drosophila melanogaster CG17666-PB,
           isoform B protein.
          Length = 271

 Score = 30.7 bits (66), Expect = 2.9
 Identities = 11/22 (50%), Positives = 14/22 (63%), Gaps = 1/22 (4%)
 Frame = +1

Query: 370 TCCRP-NSACPWWWYS*VRSGC 432
           TCC P ++ CPW WY    +GC
Sbjct: 117 TCCMPCSNQCPWSWYYNPCTGC 138


>AE014296-2187|AAN11857.1|  872|Drosophila melanogaster CG17666-PA,
           isoform A protein.
          Length = 872

 Score = 30.7 bits (66), Expect = 2.9
 Identities = 11/22 (50%), Positives = 14/22 (63%), Gaps = 1/22 (4%)
 Frame = +1

Query: 370 TCCRP-NSACPWWWYS*VRSGC 432
           TCC P ++ CPW WY    +GC
Sbjct: 718 TCCMPCSNQCPWSWYYNPCTGC 739


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,519,612
Number of Sequences: 53049
Number of extensions: 366928
Number of successful extensions: 2222
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1281
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2096
length of database: 24,988,368
effective HSP length: 85
effective length of database: 20,479,203
effective search space used: 4525903863
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)