Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP17_F_B13
         (849 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

12_02_0992 + 25083397-25083537,25084198-25084228,25084971-250851...    45   9e-05
06_01_0579 + 4099039-4099086,4099798-4099848,4100151-4100286,410...    38   0.008
06_01_0816 - 6171189-6171255,6171277-6171441,6172037-6172618,617...    30   2.7  

>12_02_0992 +
           25083397-25083537,25084198-25084228,25084971-25085139,
           25085228-25085291,25085408-25085474,25086543-25086586,
           25086835-25086922,25087079-25087238,25087659-25087779,
           25087859-25087942,25088043-25088162,25088689-25088901,
           25088995-25089054,25089144-25089262,25089407-25089465,
           25089585-25089919
          Length = 624

 Score = 44.8 bits (101), Expect = 9e-05
 Identities = 15/58 (25%), Positives = 28/58 (48%)
 Frame = +3

Query: 273 GEYTKAMNKDWHSGXFCCWQCDESLTGQRYVLRDEXPYCIKCYESVFANGCEECXKII 446
           G +   M+  WH   F C+ C++ ++   + + ++ PY   CY+  F   C+ C   I
Sbjct: 267 GRFLSCMDSVWHPQCFRCFACNKPISEYEFAMHEDQPYHKSCYKDFFHPKCDVCKNFI 324


>06_01_0579 +
           4099039-4099086,4099798-4099848,4100151-4100286,
           4100287-4100401,4100496-4100528,4101037-4101166,
           4101663-4101751,4102042-4102148,4102238-4102309,
           4102384-4102764,4104907-4105064,4105581-4105674,
           4106082-4106089,4106297-4106387,4107136-4107289,
           4108257-4108377,4108468-4108551,4108946-4109065,
           4109181-4109393,4109482-4109544,4109668-4109783,
           4110132-4110190,4111126-4111445
          Length = 920

 Score = 38.3 bits (85), Expect = 0.008
 Identities = 15/58 (25%), Positives = 24/58 (41%)
 Frame = +3

Query: 273 GEYTKAMNKDWHSGXFCCWQCDESLTGQRYVLRDEXPYCIKCYESVFANGCEECXKII 446
           G +   M   WH   F C  C++ +    + +    PY   CY+  F   C+ C + I
Sbjct: 568 GRFLSCMGAVWHPECFRCHACNQPIYDYEFSMSGNHPYHKTCYKERFHPKCDVCKQFI 625


>06_01_0816 -
           6171189-6171255,6171277-6171441,6172037-6172618,
           6173451-6173761
          Length = 374

 Score = 29.9 bits (64), Expect = 2.7
 Identities = 13/37 (35%), Positives = 18/37 (48%), Gaps = 1/37 (2%)
 Frame = +3

Query: 324 CWQCDESLTGQRYV-LRDEXPYCIKCYESVFANGCEE 431
           CW  D+ L  + Y  L+   PY   CYE+ F   C +
Sbjct: 224 CWNVDDKLLQESYPGLKVVGPYVDDCYENSFWEECSD 260


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,366,004
Number of Sequences: 37544
Number of extensions: 184371
Number of successful extensions: 447
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 440
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 447
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2362209084
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)