Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP17_F_B10
         (881 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

02_02_0488 - 10863248-10863960,10865933-10866269                       30   2.8  
01_01_0942 + 7428384-7429536,7429623-7430335                           29   6.5  
11_06_0767 + 27121761-27123335,27123701-27123910,27124843-271249...    28   8.6  
11_01_0334 + 2495275-2495433,2495553-2495661,2496311-2496378,249...    28   8.6  

>02_02_0488 - 10863248-10863960,10865933-10866269
          Length = 349

 Score = 29.9 bits (64), Expect = 2.8
 Identities = 15/37 (40%), Positives = 18/37 (48%)
 Frame = +3

Query: 561 EYRSAGPGQTVAKRSAWIDSQVFGFSRAIRAFGIERF 671
           EY + GPG  VA R AW   +V   S     F + RF
Sbjct: 293 EYMNYGPGAGVAGRVAWPGHRVINDSAEAERFTVARF 329


>01_01_0942 + 7428384-7429536,7429623-7430335
          Length = 621

 Score = 28.7 bits (61), Expect = 6.5
 Identities = 13/37 (35%), Positives = 17/37 (45%)
 Frame = +3

Query: 561 EYRSAGPGQTVAKRSAWIDSQVFGFSRAIRAFGIERF 671
           EYR++GPG  V  R  W   +V         F + RF
Sbjct: 565 EYRNSGPGAAVGGRVPWPGHRVIKLPEEAMEFTVGRF 601


>11_06_0767 + 27121761-27123335,27123701-27123910,27124843-27124911,
            27125387-27125656,27126027-27126377,27126480-27126757,
            27126887-27128330
          Length = 1398

 Score = 28.3 bits (60), Expect = 8.6
 Identities = 13/27 (48%), Positives = 18/27 (66%)
 Frame = +2

Query: 584  PDRGQAFGVDRLAGFRLLASHTGIRHR 664
            PDRG++ G DR +G R L+S +  R R
Sbjct: 1220 PDRGRSRGYDRRSGSRSLSSRSRSRSR 1246


>11_01_0334 +
           2495275-2495433,2495553-2495661,2496311-2496378,
           2496476-2496577,2496853-2497003,2497173-2497222,
           2497432-2497557,2497761-2497863,2498104-2498204,
           2498540-2498677,2498768-2498911,2499028-2499103,
           2499224-2499309,2499432-2499560,2500572-2500674,
           2500776-2500843,2500912-2501013,2501432-2501527,
           2501723-2501848,2502152-2502254,2502427-2502569,
           2503017-2503154,2503248-2503391,2503535-2503610,
           2503883-2503968,2504135-2504212,2505180-2505254,
           2505362-2505496,2506240-2506272,2507886-2507905,
           2508570-2508666,2508899-2509000,2510612-2510725
          Length = 1126

 Score = 28.3 bits (60), Expect = 8.6
 Identities = 20/58 (34%), Positives = 27/58 (46%)
 Frame = -1

Query: 740 RGPRVHAVQDVVEPARHLRAXLLEPFDAECPYGSREAENLRVDPRRTLGHGLARAGRP 567
           RG  V   +++VEP R +R  LLE  D   P   R   ++     + LG  L R  RP
Sbjct: 87  RGVDVLTKENIVEPMRDIRRALLEA-DVSLPVVRRFVSSI---SEKALGSDLIRGVRP 140


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,359,698
Number of Sequences: 37544
Number of extensions: 402986
Number of successful extensions: 1052
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1028
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1052
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2491484208
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)