Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP17_F_B10
         (881 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z66519-4|CAA91373.1|  210|Caenorhabditis elegans Hypothetical pr...    76   4e-14
Z81063-4|CAB02955.1|  209|Caenorhabditis elegans Hypothetical pr...    50   2e-06
AF016451-10|AAB66006.2|  259|Caenorhabditis elegans Hypothetical...    31   1.4  
Z81116-1|CAB03301.1|  347|Caenorhabditis elegans Hypothetical pr...    29   5.8  
Z47357-3|CAA87422.1|  360|Caenorhabditis elegans Hypothetical pr...    28   7.7  
L25598-4|AAV58888.1|  737|Caenorhabditis elegans Calpain family ...    28   7.7  
L25598-3|AAM15551.1|  759|Caenorhabditis elegans Calpain family ...    28   7.7  
L25598-2|AAV58887.1|  780|Caenorhabditis elegans Calpain family ...    28   7.7  

>Z66519-4|CAA91373.1|  210|Caenorhabditis elegans Hypothetical
           protein B0334.4 protein.
          Length = 210

 Score = 75.8 bits (178), Expect = 4e-14
 Identities = 39/89 (43%), Positives = 53/89 (59%), Gaps = 5/89 (5%)
 Frame = +2

Query: 254 NTSVFNFSWDXVARGYWRRYPNPQSTHVLSEDTWSRQVRDGCLYTKRLLTK-----TNRV 418
           NTS F +S+D VA  +W RYPN  + H++SED   RQ+ D  + TK+L+ K       RV
Sbjct: 8   NTS-FPYSFDEVASAFWDRYPNSHAKHIISEDVLERQITDNTIVTKKLIVKQGSSILKRV 66

Query: 419 PKWGERFFNAKSVKIIEESVVDPEKKILV 505
           P+W  R  + + V +IEESV D   K LV
Sbjct: 67  PRWISRMTDIQVVPVIEESVYDKVSKKLV 95


>Z81063-4|CAB02955.1|  209|Caenorhabditis elegans Hypothetical
           protein F15D3.6 protein.
          Length = 209

 Score = 50.0 bits (114), Expect = 2e-06
 Identities = 21/86 (24%), Positives = 43/86 (50%), Gaps = 1/86 (1%)
 Frame = +2

Query: 242 RYFENTSVFNFSWDXVARGYWRRYPNPQSTHVLSEDTWSRQVRDGCLYTKRLLTKTNRVP 421
           R + +  +F+  W+ VA+  +R+YPNP +  +   D   + +  G + T+R++     +P
Sbjct: 2   RIWSSEHIFDHEWETVAQAAFRKYPNPLNRSITGIDVVKQTLEAGKILTERIIQSHFSIP 61

Query: 422 KWGERFFNAKSVKIIEE-SVVDPEKK 496
            W  +       +   E +V+DP +K
Sbjct: 62  SWATKLTGFSGTQYSHEYTVIDPTRK 87


>AF016451-10|AAB66006.2|  259|Caenorhabditis elegans Hypothetical
           protein C03A7.12 protein.
          Length = 259

 Score = 30.7 bits (66), Expect = 1.4
 Identities = 20/72 (27%), Positives = 31/72 (43%), Gaps = 2/72 (2%)
 Frame = -2

Query: 319 IWVSPPVTTRNXIPTEVKDRSIFEISRHF--TV*TSMLFTSIIFGLHSKTEGKRLXFSIH 146
           +W+     T N +   V    I  + R F  TV T     S + G + +TE  R  FS+ 
Sbjct: 20  LWMGISADTVNLLQPRVFKFQILTVLRFFFSTVPTQSAILSFLSGGNRRTENARAIFSVS 79

Query: 145 LNAGFFLRNLIR 110
           +N   + R  +R
Sbjct: 80  INFPVYPRYAVR 91


>Z81116-1|CAB03301.1|  347|Caenorhabditis elegans Hypothetical
           protein T06C12.1 protein.
          Length = 347

 Score = 28.7 bits (61), Expect = 5.8
 Identities = 14/41 (34%), Positives = 21/41 (51%)
 Frame = +2

Query: 233 KMTRYFENTSVFNFSWDXVARGYWRRYPNPQSTHVLSEDTW 355
           KM  +F    VF   W+ +AR +   Y N  +  V+S +TW
Sbjct: 42  KMVIFFAGWGVFFSGWELIARPFAHNYNN--AVIVMSVNTW 80


>Z47357-3|CAA87422.1|  360|Caenorhabditis elegans Hypothetical
           protein ZK1128.3 protein.
          Length = 360

 Score = 28.3 bits (60), Expect = 7.7
 Identities = 22/61 (36%), Positives = 33/61 (54%), Gaps = 1/61 (1%)
 Frame = +2

Query: 239 TRYFENTSVFNFSWDXVARGYWRRYPN-PQSTHVLSEDTWSRQVRDGCLYTKRLLTKTNR 415
           TR FE  SV NF    + R YW   P+ P+ ++ +   TW+  + DGCL +  LL   N+
Sbjct: 166 TRSFEMESVENFQSHRMRRVYWN--PSIPKDSNSMFR-TWNHFL-DGCLLS-LLLVPLNK 220

Query: 416 V 418
           +
Sbjct: 221 L 221


>L25598-4|AAV58888.1|  737|Caenorhabditis elegans Calpain family
           protein 1, isoform b protein.
          Length = 737

 Score = 28.3 bits (60), Expect = 7.7
 Identities = 19/75 (25%), Positives = 33/75 (44%), Gaps = 3/75 (4%)
 Frame = +2

Query: 314 PNPQSTHVLSEDTWSRQVRDGCLYTKRLLTKTNRVPKWGERFFNAKSVKIIE---ESVVD 484
           P+P S    +E     ++RD CL +KRL      +      FF+ +  K +E      + 
Sbjct: 243 PSPISPRPTTEPQDFYELRDQCLESKRLFEDPQFLANDSSLFFSKRPPKRVEWLRPGEIT 302

Query: 485 PEKKILVNIHQKFRV 529
            E +++   H +F V
Sbjct: 303 REPQLITEGHSRFDV 317


>L25598-3|AAM15551.1|  759|Caenorhabditis elegans Calpain family
           protein 1, isoform d protein.
          Length = 759

 Score = 28.3 bits (60), Expect = 7.7
 Identities = 19/75 (25%), Positives = 33/75 (44%), Gaps = 3/75 (4%)
 Frame = +2

Query: 314 PNPQSTHVLSEDTWSRQVRDGCLYTKRLLTKTNRVPKWGERFFNAKSVKIIE---ESVVD 484
           P+P S    +E     ++RD CL +KRL      +      FF+ +  K +E      + 
Sbjct: 268 PSPISPRPTTEPQDFYELRDQCLESKRLFEDPQFLANDSSLFFSKRPPKRVEWLRPGEIT 327

Query: 485 PEKKILVNIHQKFRV 529
            E +++   H +F V
Sbjct: 328 REPQLITEGHSRFDV 342


>L25598-2|AAV58887.1|  780|Caenorhabditis elegans Calpain family
           protein 1, isoform a protein.
          Length = 780

 Score = 28.3 bits (60), Expect = 7.7
 Identities = 19/75 (25%), Positives = 33/75 (44%), Gaps = 3/75 (4%)
 Frame = +2

Query: 314 PNPQSTHVLSEDTWSRQVRDGCLYTKRLLTKTNRVPKWGERFFNAKSVKIIE---ESVVD 484
           P+P S    +E     ++RD CL +KRL      +      FF+ +  K +E      + 
Sbjct: 289 PSPISPRPTTEPQDFYELRDQCLESKRLFEDPQFLANDSSLFFSKRPPKRVEWLRPGEIT 348

Query: 485 PEKKILVNIHQKFRV 529
            E +++   H +F V
Sbjct: 349 REPQLITEGHSRFDV 363


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,201,213
Number of Sequences: 27780
Number of extensions: 344123
Number of successful extensions: 788
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 759
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 787
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2223883816
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)