Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP17_F_B10
         (881 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.          27   0.17 
AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.      27   0.17 
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.              23   2.8  
AF274024-1|AAF90150.1|  232|Apis mellifera tetraspanin F139 prot...    23   2.8  
X72577-1|CAA51169.1|  283|Apis mellifera Apidaecin precursor pro...    22   8.6  

>EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.
          Length = 683

 Score = 27.5 bits (58), Expect = 0.17
 Identities = 11/34 (32%), Positives = 18/34 (52%)
 Frame = +2

Query: 419 PKWGERFFNAKSVKIIEESVVDPEKKILVNIHQK 520
           P WG   ++ +++    +  VDP   +L NIH K
Sbjct: 634 PVWGRHIYDGRAMGFPLDKPVDPLLLVLSNIHVK 667


>AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.
          Length = 683

 Score = 27.5 bits (58), Expect = 0.17
 Identities = 11/34 (32%), Positives = 18/34 (52%)
 Frame = +2

Query: 419 PKWGERFFNAKSVKIIEESVVDPEKKILVNIHQK 520
           P WG   ++ +++    +  VDP   +L NIH K
Sbjct: 634 PVWGRHIYDGRAMGFPLDKPVDPLLLVLSNIHVK 667


>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
          Length = 1946

 Score = 23.4 bits (48), Expect = 2.8
 Identities = 10/22 (45%), Positives = 15/22 (68%), Gaps = 1/22 (4%)
 Frame = -2

Query: 328  TLRI-WVSPPVTTRNXIPTEVK 266
            T+RI W+SPP++  N + T  K
Sbjct: 1097 TIRISWMSPPLSAANGVITGYK 1118


>AF274024-1|AAF90150.1|  232|Apis mellifera tetraspanin F139
           protein.
          Length = 232

 Score = 23.4 bits (48), Expect = 2.8
 Identities = 9/18 (50%), Positives = 12/18 (66%)
 Frame = -1

Query: 254 FRNISSFYRLDFNAFYFN 201
           FRNIS  Y+  FN ++ N
Sbjct: 112 FRNISEKYQEIFNGYFLN 129


>X72577-1|CAA51169.1|  283|Apis mellifera Apidaecin precursor
           protein.
          Length = 283

 Score = 21.8 bits (44), Expect = 8.6
 Identities = 9/25 (36%), Positives = 14/25 (56%)
 Frame = -3

Query: 651 PVWLARSRKPASRSTPNAWPRSGPG 577
           PV++++ R P  R    A P + PG
Sbjct: 102 PVYISQPRPPHPRLRREAEPEAEPG 126



 Score = 21.8 bits (44), Expect = 8.6
 Identities = 9/25 (36%), Positives = 14/25 (56%)
 Frame = -3

Query: 651 PVWLARSRKPASRSTPNAWPRSGPG 577
           PV++++ R P  R    A P + PG
Sbjct: 158 PVYISQPRPPHPRLRREAEPEAEPG 182


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 209,322
Number of Sequences: 438
Number of extensions: 4304
Number of successful extensions: 26
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 26
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 28644972
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)