Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP17_F_B09
(974 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 36 0.009
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 34 0.035
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 34 0.035
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 31 0.25
SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr 2|||M... 29 0.99
SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr... 28 2.3
SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family ... 27 4.0
SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit Spp42|Schizosac... 26 9.3
SPBC20F10.01 |gar1|SPBC25H2.01c|snoRNP pseudouridylase complex p... 26 9.3
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 35.9 bits (79), Expect = 0.009
Identities = 26/86 (30%), Positives = 32/86 (37%), Gaps = 5/86 (5%)
Frame = +1
Query: 724 PXFPXXXLPPKPLXAXXPNPPPXTAXSXPWVXXPXPPPPRXSXXTNTXPLP----SXPSX 891
P P +PP P + P P + P + P PP T+T P+P PS
Sbjct: 1004 PAAPLARVPPVPKLSSKAPPVPLPSADAPPIPVPSTAPP-VPIPTSTPPVPKSSSGAPSA 1062
Query: 892 XPPXXXXXSFFXS-PXPPXTPXXLAP 966
PP S S P P P AP
Sbjct: 1063 PPPVPAPSSEIPSIPAPSGAPPVPAP 1088
Score = 35.1 bits (77), Expect = 0.015
Identities = 22/80 (27%), Positives = 30/80 (37%)
Frame = +1
Query: 733 PXXXLPPKPLXAXXPNPPPXTAXSXPWVXXPXPPPPRXSXXTNTXPLPSXPSXXPPXXXX 912
P PP P+ + P P P + + P V P PP P+P+ S PP
Sbjct: 1126 PSVAAPPVPVPSGAP-PVPKPSVAAPPVPAPSGAPPVPKPSVAAPPVPAPSSGIPPVPKP 1184
Query: 913 XSFFXSPXPPXTPXXLAPXP 972
+ P PP + P P
Sbjct: 1185 AA-GVPPVPPPSEAPPVPKP 1203
Score = 34.3 bits (75), Expect = 0.026
Identities = 21/67 (31%), Positives = 25/67 (37%)
Frame = +1
Query: 751 PKPLXAXXPNPPPXTAXSXPWVXXPXPPPPRXSXXTNTXPLPSXPSXXPPXXXXXSFFXS 930
PKP P PPP TA P PP P + P+P+ S P S S
Sbjct: 1201 PKPSVGVPPVPPPSTAPPVPTPSAGLPPVPVPT--AKAPPVPAPSSEAPSVSTPRSSVPS 1258
Query: 931 PXPPXTP 951
P +P
Sbjct: 1259 PHSNASP 1265
Score = 31.5 bits (68), Expect = 0.19
Identities = 18/56 (32%), Positives = 20/56 (35%)
Frame = +1
Query: 733 PXXXLPPKPLXAXXPNPPPXTAXSXPWVXXPXPPPPRXSXXTNTXPLPSXPSXXPP 900
P PP P + P P A P V P PP P+P PS PP
Sbjct: 1164 PSVAAPPVPAPSSGIPPVPKPAAGVPPVPPPSEAPPVPKPSVGVPPVP-PPSTAPP 1218
Score = 31.1 bits (67), Expect = 0.25
Identities = 25/81 (30%), Positives = 27/81 (33%), Gaps = 7/81 (8%)
Frame = +1
Query: 751 PKPLXAXXPNPPPXTAXSXPWVXXPXPPPPRXSXXTNTXPLPS-------XPSXXPPXXX 909
PKP A P P P A P PP P S P P+ PS PP
Sbjct: 1143 PKPSVAAPPVPAPSGAPPVPKPSVAAPPVPAPSSGIPPVPKPAAGVPPVPPPSEAPP-VP 1201
Query: 910 XXSFFXSPXPPXTPXXLAPXP 972
S P PP + P P
Sbjct: 1202 KPSVGVPPVPPPSTAPPVPTP 1222
Score = 30.3 bits (65), Expect = 0.43
Identities = 24/74 (32%), Positives = 26/74 (35%)
Frame = +1
Query: 751 PKPLXAXXPNPPPXTAXSXPWVXXPXPPPPRXSXXTNTXPLPSXPSXXPPXXXXXSFFXS 930
PKP A P P P A P V P PP P+P PS PP S
Sbjct: 1095 PKPSVAAPPVPKPSVAV--PPVPAPSGAPPVPKPSVAAPPVP-VPSGAPP-VPKPSVAAP 1150
Query: 931 PXPPXTPXXLAPXP 972
P P + P P
Sbjct: 1151 PVPAPSGAPPVPKP 1164
Score = 29.9 bits (64), Expect = 0.57
Identities = 16/56 (28%), Positives = 22/56 (39%)
Frame = +1
Query: 733 PXXXLPPKPLXAXXPNPPPXTAXSXPWVXXPXPPPPRXSXXTNTXPLPSXPSXXPP 900
P +PP P + P P P + P V P PP + P+P + PP
Sbjct: 1184 PAAGVPPVPPPSEAP-PVPKPSVGVPPVPPPSTAPPVPTPSAGLPPVPVPTAKAPP 1238
Score = 29.1 bits (62), Expect = 0.99
Identities = 16/48 (33%), Positives = 20/48 (41%), Gaps = 3/48 (6%)
Frame = +2
Query: 839 PXXPLXXTXPPXPQXP---PXXPPPRXXXRSSXPHXPLXPPXXSPPXP 973
P P+ + PP P+ P PPP S P P P +PP P
Sbjct: 1041 PPVPIPTSTPPVPKSSSGAPSAPPPVPAPSSEIPSIP--APSGAPPVP 1086
Score = 28.3 bits (60), Expect = 1.7
Identities = 16/46 (34%), Positives = 17/46 (36%)
Frame = +2
Query: 836 PPXXPLXXTXPPXPQXPPXXPPPRXXXRSSXPHXPLXPPXXSPPXP 973
PP PL P P PP S P PL P +PP P
Sbjct: 991 PPSAPLSKPVSTSPAAPLARVPPVPKLSSKAPPVPL-PSADAPPIP 1035
Score = 26.6 bits (56), Expect = 5.3
Identities = 16/52 (30%), Positives = 20/52 (38%)
Frame = +1
Query: 733 PXXXLPPKPLXAXXPNPPPXTAXSXPWVXXPXPPPPRXSXXTNTXPLPSXPS 888
P LPP P+ P P + P V P P S +N P P+ S
Sbjct: 1222 PSAGLPPVPVPTAKAPPVPAPSSEAPSVSTPRSSVP--SPHSNASPSPTSSS 1271
Score = 26.2 bits (55), Expect = 7.0
Identities = 20/74 (27%), Positives = 25/74 (33%)
Frame = +1
Query: 751 PKPLXAXXPNPPPXTAXSXPWVXXPXPPPPRXSXXTNTXPLPSXPSXXPPXXXXXSFFXS 930
PKP A P P P + P V P P + P+P PP + +
Sbjct: 1162 PKPSVAAPPVPAPSSGI--PPVPKPAAGVPPVPPPSEAPPVPKPSVGVPPVPPPST---A 1216
Query: 931 PXPPXTPXXLAPXP 972
P P L P P
Sbjct: 1217 PPVPTPSAGLPPVP 1230
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 33.9 bits (74), Expect = 0.035
Identities = 16/37 (43%), Positives = 17/37 (45%)
Frame = +2
Query: 830 PPPPXXPLXXTXPPXPQXPPXXPPPRXXXRSSXPHXP 940
PPP P + PP P PP PPP SS P P
Sbjct: 1709 PPPMSVPPPPSAPPMPAGPPSAPPP-PLPASSAPSVP 1744
Score = 29.1 bits (62), Expect = 0.99
Identities = 14/44 (31%), Positives = 14/44 (31%)
Frame = +2
Query: 836 PPXXPLXXTXPPXPQXPPXXPPPRXXXRSSXPHXPLXPPXXSPP 967
PP P P P PP S P P PP PP
Sbjct: 1690 PPVRPQSAAPPQMSAPTPPPPPMSVPPPPSAPPMPAGPPSAPPP 1733
Score = 27.9 bits (59), Expect = 2.3
Identities = 18/59 (30%), Positives = 24/59 (40%)
Frame = +1
Query: 724 PXFPXXXLPPKPLXAXXPNPPPXTAXSXPWVXXPXPPPPRXSXXTNTXPLPSXPSXXPP 900
P P P +P A PP +A + P PPPP + P+P+ P PP
Sbjct: 1683 PAHPVSTPPVRPQSAA---PPQMSAPTPPPPPMSVPPPP------SAPPMPAGPPSAPP 1732
Score = 27.1 bits (57), Expect = 4.0
Identities = 15/47 (31%), Positives = 19/47 (40%)
Frame = +1
Query: 748 PPKPLXAXXPNPPPXTAXSXPWVXXPXPPPPRXSXXTNTXPLPSXPS 888
PP P+ PPP +A P PPPP + + P P S
Sbjct: 1708 PPPPMSV----PPPPSAPPMPAGPPSAPPPPLPASSAPSVPNPGDRS 1750
Score = 26.6 bits (56), Expect = 5.3
Identities = 20/61 (32%), Positives = 23/61 (37%), Gaps = 2/61 (3%)
Frame = +1
Query: 724 PXFPXXXLPPKPLXAXXPNPPPXTAXSXPWVXXPXPPPPRXSXXTNTXPLP--SXPSXXP 897
P P PP+ + A P PPP + P PP P PLP S PS
Sbjct: 1691 PVRPQSAAPPQ-MSAPTPPPPPMSVPPPP----SAPPMPAGPPSAPPPPLPASSAPSVPN 1745
Query: 898 P 900
P
Sbjct: 1746 P 1746
Score = 25.8 bits (54), Expect = 9.3
Identities = 15/47 (31%), Positives = 16/47 (34%)
Frame = +2
Query: 833 PPPXXPLXXTXPPXPQXPPXXPPPRXXXRSSXPHXPLXPPXXSPPXP 973
PP PP PP PP S P PL P +P P
Sbjct: 1699 PPQMSAPTPPPPPMSVPPPPSAPPMPAGPPSAPPPPL-PASSAPSVP 1744
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 33.9 bits (74), Expect = 0.035
Identities = 16/56 (28%), Positives = 21/56 (37%)
Frame = +1
Query: 733 PXXXLPPKPLXAXXPNPPPXTAXSXPWVXXPXPPPPRXSXXTNTXPLPSXPSXXPP 900
P PP P+ P PPP + P PPPP S + P+ + P
Sbjct: 748 PIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPPPAVSAGGSRYYAPAPQAEPEP 803
Score = 33.5 bits (73), Expect = 0.046
Identities = 22/76 (28%), Positives = 25/76 (32%)
Frame = +1
Query: 724 PXFPXXXLPPKPLXAXXPNPPPXTAXSXPWVXXPXPPPPRXSXXTNTXPLPSXPSXXPPX 903
P P + P P A P PPP P PPPP P P P P
Sbjct: 733 PPPPPAVIVPTPAPAPIPVPPPAPIMGGP------PPPPPPPGVAGAGP-PPPPPPPPAV 785
Query: 904 XXXXSFFXSPXPPXTP 951
S + +P P P
Sbjct: 786 SAGGSRYYAPAPQAEP 801
Score = 28.7 bits (61), Expect = 1.3
Identities = 17/53 (32%), Positives = 17/53 (32%)
Frame = +2
Query: 815 LXXXSPPPPXXPLXXTXPPXPQXPPXXPPPRXXXRSSXPHXPLXPPXXSPPXP 973
L SPPPP P P P P PP P P PP P
Sbjct: 727 LLLKSPPPPP-PAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPP 778
Score = 28.7 bits (61), Expect = 1.3
Identities = 15/45 (33%), Positives = 17/45 (37%), Gaps = 1/45 (2%)
Frame = +2
Query: 830 PPPPXXPLXXTXP-PXPQXPPXXPPPRXXXRSSXPHXPLXPPXXS 961
P P P+ P P PP PPP + P P PP S
Sbjct: 742 PTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPPPAVS 786
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 31.1 bits (67), Expect = 0.25
Identities = 18/51 (35%), Positives = 19/51 (37%)
Frame = +1
Query: 748 PPKPLXAXXPNPPPXTAXSXPWVXXPXPPPPRXSXXTNTXPLPSXPSXXPP 900
PP P PP S P PPPPR S + PLP PP
Sbjct: 313 PPPPPSRRNRGKPPIGNGSSNSSLPPPPPPPR-SNAAGSIPLPPQGRSAPP 362
Score = 30.3 bits (65), Expect = 0.43
Identities = 18/54 (33%), Positives = 18/54 (33%), Gaps = 6/54 (11%)
Frame = +2
Query: 830 PPPPXXPLXXTXPPX------PQXPPXXPPPRXXXRSSXPHXPLXPPXXSPPXP 973
PPPP PP PP PPPR S P P PP P
Sbjct: 313 PPPPPSRRNRGKPPIGNGSSNSSLPPPPPPPRSNAAGSIPLPPQGRSAPPPPPP 366
Score = 29.9 bits (64), Expect = 0.57
Identities = 15/50 (30%), Positives = 22/50 (44%)
Frame = +1
Query: 748 PPKPLXAXXPNPPPXTAXSXPWVXXPXPPPPRXSXXTNTXPLPSXPSXXP 897
PP + + PP + P P PP + T+T P+P+ PS P
Sbjct: 376 PPPLSSSRAVSNPPAPPPAIPGRSAPALPPLGNASRTSTPPVPTPPSLPP 425
Score = 28.3 bits (60), Expect = 1.7
Identities = 16/49 (32%), Positives = 19/49 (38%)
Frame = +2
Query: 827 SPPPPXXPLXXTXPPXPQXPPXXPPPRXXXRSSXPHXPLXPPXXSPPXP 973
+PP P P P P PP PP + P P P +PP P
Sbjct: 414 TPPVPTPPSLPPSAP-PSLPPSAPPSLPMGAPAAPPLPPSAP-IAPPLP 460
Score = 28.3 bits (60), Expect = 1.7
Identities = 21/78 (26%), Positives = 26/78 (33%)
Frame = +1
Query: 733 PXXXLPPKPLXAXXPNPPPXTAXSXPWVXXPXPPPPRXSXXTNTXPLPSXPSXXPPXXXX 912
P PP + P+ PP S P PP P + PLP+ PP
Sbjct: 415 PPVPTPPSLPPSAPPSLPPSAPPSLPMGAPAAPPLPPSAPI--APPLPAGMPAAPPLPPA 472
Query: 913 XSFFXSPXPPXTPXXLAP 966
+P P P AP
Sbjct: 473 A---PAPPPAPAPAPAAP 487
Score = 27.5 bits (58), Expect = 3.0
Identities = 16/51 (31%), Positives = 19/51 (37%), Gaps = 3/51 (5%)
Frame = +2
Query: 830 PP--PPXXPLXX-TXPPXPQXPPXXPPPRXXXRSSXPHXPLXPPXXSPPXP 973
PP PP P+ PP P P PP ++ P P P P P
Sbjct: 432 PPSAPPSLPMGAPAAPPLPPSAPIAPPLPAGMPAAPPLPPAAPAPPPAPAP 482
Score = 27.1 bits (57), Expect = 4.0
Identities = 20/69 (28%), Positives = 24/69 (34%), Gaps = 1/69 (1%)
Frame = +1
Query: 748 PPKPLXAXXPNPPPXTAXSXPWVXXPXPPP-PRXSXXTNTXPLPSXPSXXPPXXXXXSFF 924
PP P PP P + P PPP P S T + P S P P +
Sbjct: 230 PPIPPSIPSSRPPERV----PSLSAPAPPPIPPPSNGTVSSPPNSPPRPIAPVSMNPAIN 285
Query: 925 XSPXPPXTP 951
+ PP P
Sbjct: 286 STSKPPLPP 294
Score = 26.6 bits (56), Expect = 5.3
Identities = 16/58 (27%), Positives = 19/58 (32%)
Frame = +1
Query: 724 PXFPXXXLPPKPLXAXXPNPPPXTAXSXPWVXXPXPPPPRXSXXTNTXPLPSXPSXXP 897
P P P + P PPP S V P PPR + P + S P
Sbjct: 234 PSIPSSRPPERVPSLSAPAPPPIPPPSNGTVSSPPNSPPRPIAPVSMNPAINSTSKPP 291
Score = 26.6 bits (56), Expect = 5.3
Identities = 17/55 (30%), Positives = 20/55 (36%), Gaps = 7/55 (12%)
Frame = +2
Query: 830 PPPPXXPLXXT-----XPPXPQXPPXXPPPRXXXRSSXPHXPLXP--PXXSPPXP 973
PPPP P PP + P PPPR + PL +PP P
Sbjct: 337 PPPPPPPRSNAAGSIPLPPQGRSAPPPPPPRSAPSTGRQPPPLSSSRAVSNPPAP 391
Score = 25.8 bits (54), Expect = 9.3
Identities = 12/35 (34%), Positives = 13/35 (37%)
Frame = +2
Query: 848 PLXXTXPPXPQXPPXXPPPRXXXRSSXPHXPLXPP 952
P + PP P P PP S P P PP
Sbjct: 224 PTSTSAPPIPPSIPSSRPPERVPSLSAPAPPPIPP 258
Score = 25.8 bits (54), Expect = 9.3
Identities = 16/40 (40%), Positives = 18/40 (45%), Gaps = 6/40 (15%)
Frame = +1
Query: 775 PNPPPXT--AXSXPWVXX----PXPPPPRXSXXTNTXPLP 876
P PPP + A S P P PPPPR + T P P
Sbjct: 339 PPPPPRSNAAGSIPLPPQGRSAPPPPPPRSAPSTGRQPPP 378
>SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 309
Score = 29.1 bits (62), Expect = 0.99
Identities = 20/76 (26%), Positives = 24/76 (31%)
Frame = +1
Query: 724 PXFPXXXLPPKPLXAXXPNPPPXTAXSXPWVXXPXPPPPRXSXXTNTXPLPSXPSXXPPX 903
P P L P P+ PP + S P + PP P P+ P PP
Sbjct: 130 PPTPQSELRPPTSAPPRPSIPPPSPASAPPIPSKAPPIP---SSLPPPAQPAAPVKSPPS 186
Query: 904 XXXXSFFXSPXPPXTP 951
P PP P
Sbjct: 187 APSLPSAVPPMPPKVP 202
Score = 28.7 bits (61), Expect = 1.3
Identities = 17/52 (32%), Positives = 19/52 (36%), Gaps = 3/52 (5%)
Frame = +2
Query: 827 SPPPPXXPLXX--TXPPXPQXPPXXPPPRXXXRSSXPHXP-LXPPXXSPPXP 973
+PP P L + PP P PP P S P P PP P P
Sbjct: 129 APPTPQSELRPPTSAPPRPSIPPPSPASAPPIPSKAPPIPSSLPPPAQPAAP 180
Score = 27.5 bits (58), Expect = 3.0
Identities = 24/82 (29%), Positives = 28/82 (34%), Gaps = 2/82 (2%)
Frame = +1
Query: 733 PXXXLPPKPLXAXXPNPPPXTAXSXPWVXXPXPP--PPRXSXXTNTXPLPSXPSXXPPXX 906
P PP P P P +A P + P P PP S P+PS S PP
Sbjct: 125 PSAPAPPTPQSELRP---PTSAPPRPSIPPPSPASAPPIPS---KAPPIPS--SLPPPAQ 176
Query: 907 XXXSFFXSPXPPXTPXXLAPXP 972
P P P + P P
Sbjct: 177 PAAPVKSPPSAPSLPSAVPPMP 198
>SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 305
Score = 27.9 bits (59), Expect = 2.3
Identities = 19/46 (41%), Positives = 20/46 (43%)
Frame = -3
Query: 972 GXGGEXXGGXRGXWGXEERXXXRGGGXXGGX*GXGGCVXXXGXXGG 835
G GG G RG +G R RGGG G G GG G GG
Sbjct: 17 GRGG--FNGGRGGFGGG-RGGARGGGRGGARGGRGGRGGARGGRGG 59
>SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1420
Score = 27.1 bits (57), Expect = 4.0
Identities = 14/49 (28%), Positives = 18/49 (36%)
Frame = +2
Query: 827 SPPPPXXPLXXTXPPXPQXPPXXPPPRXXXRSSXPHXPLXPPXXSPPXP 973
+PPPP P T PP P P + + PP +P P
Sbjct: 237 APPPPPPP---TLPPQSTNTSQLPMPSRNVNNLGSQVNIPPPPATPSQP 282
Score = 26.2 bits (55), Expect = 7.0
Identities = 21/59 (35%), Positives = 22/59 (37%), Gaps = 2/59 (3%)
Frame = +1
Query: 781 PPPXTAXSXPWVXXPXPPPPRX--SXXTNTXPLPSXPSXXPPXXXXXSFFXSPXPPXTP 951
PP T + P PPPP TNT LP PS S P PP TP
Sbjct: 224 PPTYTPKQADPLPAPPPPPPPTLPPQSTNTSQLP-MPSRN--VNNLGSQVNIPPPPATP 279
>SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit
Spp42|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2363
Score = 25.8 bits (54), Expect = 9.3
Identities = 12/35 (34%), Positives = 12/35 (34%)
Frame = +1
Query: 775 PNPPPXTAXSXPWVXXPXPPPPRXSXXTNTXPLPS 879
P PPP P P PPP N P S
Sbjct: 10 PPPPPPPGFEPPSQPPPPPPPGYVKKRKNKTPAQS 44
>SPBC20F10.01 |gar1|SPBC25H2.01c|snoRNP pseudouridylase complex
protein Gar1 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 194
Score = 25.8 bits (54), Expect = 9.3
Identities = 20/60 (33%), Positives = 24/60 (40%), Gaps = 2/60 (3%)
Frame = -1
Query: 896 GXXEGXEGRGXVXVXXEXRGG--GGXGXXTQGXEXAVXGGGLGXXAXXGFGGRXXXGNXG 723
G G GRG RGG GG G ++G G G + GFGG G+ G
Sbjct: 129 GARNGPAGRGGRGGFRGGRGGSRGGFGGNSRG--------GFGGGSRGGFGGGSRGGSRG 180
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,050,492
Number of Sequences: 5004
Number of extensions: 26988
Number of successful extensions: 240
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 59
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 150
length of database: 2,362,478
effective HSP length: 73
effective length of database: 1,997,186
effective search space used: 501293686
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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