Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP17_F_B06
         (870 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB090813-1|BAC57901.1|  724|Anopheles gambiae gag-like protein p...    26   1.3  
AJ441131-7|CAD29636.1| 1977|Anopheles gambiae putative Tyr/Ser/T...    24   6.9  
AJ439398-6|CAD28129.1| 1978|Anopheles gambiae putative Tyr/Ser/T...    24   6.9  
AB090816-2|BAC57908.1| 1201|Anopheles gambiae reverse transcript...    24   6.9  

>AB090813-1|BAC57901.1|  724|Anopheles gambiae gag-like protein
           protein.
          Length = 724

 Score = 26.2 bits (55), Expect = 1.3
 Identities = 15/45 (33%), Positives = 22/45 (48%)
 Frame = +2

Query: 437 Q*QPRPERQGVRDQELAQRHPQRAQLQHAGAADWTTCSNRRWAHR 571
           Q Q +  +Q  + Q+  Q+ PQ+ QLQ      WTT    R + R
Sbjct: 202 QQQQQQRQQQQQCQQQRQQQPQQQQLQQPQQQLWTTVVRGRPSQR 246


>AJ441131-7|CAD29636.1| 1977|Anopheles gambiae putative Tyr/Ser/Thr
            phosphatase protein.
          Length = 1977

 Score = 23.8 bits (49), Expect = 6.9
 Identities = 12/30 (40%), Positives = 14/30 (46%)
 Frame = -3

Query: 424  TLPATPSXSPKPGMRVPVRLSPCPFTLSRA 335
            +LP TP   P    R PV    CP  L+ A
Sbjct: 1365 SLPLTPPSVPYASDRPPVATFSCPDGLAHA 1394


>AJ439398-6|CAD28129.1| 1978|Anopheles gambiae putative Tyr/Ser/Thr
            phosphatase protein.
          Length = 1978

 Score = 23.8 bits (49), Expect = 6.9
 Identities = 12/30 (40%), Positives = 14/30 (46%)
 Frame = -3

Query: 424  TLPATPSXSPKPGMRVPVRLSPCPFTLSRA 335
            +LP TP   P    R PV    CP  L+ A
Sbjct: 1362 SLPLTPPSVPYASDRPPVATFSCPDGLAHA 1391


>AB090816-2|BAC57908.1| 1201|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1201

 Score = 23.8 bits (49), Expect = 6.9
 Identities = 9/38 (23%), Positives = 16/38 (42%)
 Frame = +2

Query: 449 RPERQGVRDQELAQRHPQRAQLQHAGAADWTTCSNRRW 562
           +P+      Q+     PQR+  ++        C +RRW
Sbjct: 271 QPDENPAGAQQHLSHRPQRSTRKNPAGRQHDRCDSRRW 308


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 633,444
Number of Sequences: 2352
Number of extensions: 10784
Number of successful extensions: 17
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 93026475
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)