Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP17_F_B06
         (870 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC114928-1|AAI14929.1|  562|Homo sapiens TMPRSS13 protein protein.     33   1.3  
AY190317-1|AAO38062.1|  558|Homo sapiens transmembrane protease ...    33   1.3  
AB048796-1|BAB39741.2|  581|Homo sapiens membrane-type mosaic se...    33   1.3  
AK027798-1|BAB55376.1|  491|Homo sapiens protein ( Homo sapiens ...    32   2.3  
M14752-1|AAA51561.1| 1130|Homo sapiens ABL1 protein.                   31   7.2  

>BC114928-1|AAI14929.1|  562|Homo sapiens TMPRSS13 protein protein.
          Length = 562

 Score = 33.1 bits (72), Expect = 1.3
 Identities = 23/57 (40%), Positives = 32/57 (56%)
 Frame = -3

Query: 415 ATPSXSPKPGMRVPVRLSPCPFTLSRASPAEAALSLWRSLKSADPMALSTFLSLPVR 245
           A+P+ +P PG   P R SP   + +RASPA A+LS   S +S+   + S   S P R
Sbjct: 59  ASPAGTP-PGRASPGRASPAQASPARASPALASLSRSSSGRSSSARSASVTTS-PTR 113


>AY190317-1|AAO38062.1|  558|Homo sapiens transmembrane protease
           serine 6 protein.
          Length = 558

 Score = 33.1 bits (72), Expect = 1.3
 Identities = 23/57 (40%), Positives = 32/57 (56%)
 Frame = -3

Query: 415 ATPSXSPKPGMRVPVRLSPCPFTLSRASPAEAALSLWRSLKSADPMALSTFLSLPVR 245
           A+P+ +P PG   P R SP   + +RASPA A+LS   S +S+   + S   S P R
Sbjct: 59  ASPAGTP-PGRASPGRASPAQASPARASPALASLSRSSSGRSSSARSASVTTS-PTR 113


>AB048796-1|BAB39741.2|  581|Homo sapiens membrane-type mosaic
           serine protease protein.
          Length = 581

 Score = 33.1 bits (72), Expect = 1.3
 Identities = 23/57 (40%), Positives = 32/57 (56%)
 Frame = -3

Query: 415 ATPSXSPKPGMRVPVRLSPCPFTLSRASPAEAALSLWRSLKSADPMALSTFLSLPVR 245
           A+P+ +P PG   P R SP   + +RASPA A+LS   S +S+   + S   S P R
Sbjct: 59  ASPAGTP-PGRASPGRASPAQASPARASPALASLSRSSSGRSSSARSASVTTS-PTR 113


>AK027798-1|BAB55376.1|  491|Homo sapiens protein ( Homo sapiens
           cDNA FLJ14892 fis, clone PLACE1004270, weakly similar to
           TRANSMEMBRANE PROTEASE, SERINE 2 (EC 3.4.21.-). ).
          Length = 491

 Score = 32.3 bits (70), Expect = 2.3
 Identities = 21/56 (37%), Positives = 28/56 (50%)
 Frame = -3

Query: 412 TPSXSPKPGMRVPVRLSPCPFTLSRASPAEAALSLWRSLKSADPMALSTFLSLPVR 245
           TP     PG   P + SP   + +RASPA A+LS   S +S+   + S   S P R
Sbjct: 64  TPPGRASPGRASPAQASPAQASPARASPALASLSRSSSGRSSSARSASVTTS-PTR 118


>M14752-1|AAA51561.1| 1130|Homo sapiens ABL1 protein.
          Length = 1130

 Score = 30.7 bits (66), Expect = 7.2
 Identities = 32/94 (34%), Positives = 42/94 (44%)
 Frame = -3

Query: 430  KXTLPATPSXSPKPGMRVPVRLSPCPFTLSRASPAEAALSLWRSLKSADPMALSTFLSLP 251
            K  LPATP   P      P+  SP P  LS    A +AL+  +   +A    +ST +SL 
Sbjct: 957  KPVLPATPKPHPAKPSGTPI--SPAPVPLSTLPSASSALAGDQPSSTAFIPLISTRVSL- 1013

Query: 250  VRGTFRAAPEVPSEFTVKLPACLRARVATCLPLA 149
             R T R  PE  S    K    L +  A CL ++
Sbjct: 1014 -RKT-RQPPERASGAITK-GVVLDSTEALCLAIS 1044


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 91,201,110
Number of Sequences: 237096
Number of extensions: 1705463
Number of successful extensions: 11064
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 10795
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11037
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11048563978
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)