Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP17_F_B05
         (1048 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U41542-8|AAN39682.1|  437|Caenorhabditis elegans Protein disulfi...    48   1e-05
U41542-7|ABO16445.1|  371|Caenorhabditis elegans Protein disulfi...    48   1e-05
U41542-6|AAK39152.1|  493|Caenorhabditis elegans Protein disulfi...    48   1e-05
Z37139-1|CAA85491.1|  485|Caenorhabditis elegans Hypothetical pr...    44   2e-04
U95074-1|AAB94647.1|  485|Caenorhabditis elegans protein disulph...    44   2e-04
L15188-9|AAM22024.1|  618|Caenorhabditis elegans Hypothetical pr...    37   0.027
Z98866-5|CAB11548.1|  436|Caenorhabditis elegans Hypothetical pr...    31   1.0  
U40411-4|AAC47065.1|  440|Caenorhabditis elegans Temporarily ass...    31   1.0  
Z92970-1|CAB07480.1|  488|Caenorhabditis elegans Hypothetical pr...    30   2.4  
AB072567-1|BAB88817.1|  488|Caenorhabditis elegans ceERp57 protein.    30   2.4  

>U41542-8|AAN39682.1|  437|Caenorhabditis elegans Protein disulfide
           isomerase protein2, isoform b protein.
          Length = 437

 Score = 47.6 bits (108), Expect = 1e-05
 Identities = 24/51 (47%), Positives = 31/51 (60%), Gaps = 3/51 (5%)
 Frame = +3

Query: 111 IFTAIALLGLALGDE---VPTEENVLVLSKANFDXVISTTEYXPXEFYAPW 254
           +F  + L  L LG     +  EENV+VL+K NFD VI+  E+   EFYAPW
Sbjct: 1   MFRLVGLFFLVLGASAAVIEEEENVIVLTKDNFDEVINGNEFILVEFYAPW 51



 Score = 33.1 bits (72), Expect = 0.34
 Identities = 12/13 (92%), Positives = 12/13 (92%)
 Frame = +1

Query: 256 CGHCKSLAPEYXK 294
           CGHCKSLAPEY K
Sbjct: 52  CGHCKSLAPEYAK 64



 Score = 30.3 bits (65), Expect = 2.4
 Identities = 14/36 (38%), Positives = 20/36 (55%)
 Frame = +2

Query: 293 RXSTKLAEXXSPIXLAKXDAXXEXDLAXXXRVRGYP 400
           + +T+L E  S I L K DA    +++    VRGYP
Sbjct: 64  KAATQLKEEGSDIKLGKLDATVHGEVSSKFEVRGYP 99


>U41542-7|ABO16445.1|  371|Caenorhabditis elegans Protein disulfide
           isomerase protein2, isoform c protein.
          Length = 371

 Score = 47.6 bits (108), Expect = 1e-05
 Identities = 24/51 (47%), Positives = 31/51 (60%), Gaps = 3/51 (5%)
 Frame = +3

Query: 111 IFTAIALLGLALGDE---VPTEENVLVLSKANFDXVISTTEYXPXEFYAPW 254
           +F  + L  L LG     +  EENV+VL+K NFD VI+  E+   EFYAPW
Sbjct: 1   MFRLVGLFFLVLGASAAVIEEEENVIVLTKDNFDEVINGNEFILVEFYAPW 51



 Score = 33.1 bits (72), Expect = 0.34
 Identities = 12/13 (92%), Positives = 12/13 (92%)
 Frame = +1

Query: 256 CGHCKSLAPEYXK 294
           CGHCKSLAPEY K
Sbjct: 52  CGHCKSLAPEYAK 64



 Score = 30.3 bits (65), Expect = 2.4
 Identities = 14/36 (38%), Positives = 20/36 (55%)
 Frame = +2

Query: 293 RXSTKLAEXXSPIXLAKXDAXXEXDLAXXXRVRGYP 400
           + +T+L E  S I L K DA    +++    VRGYP
Sbjct: 64  KAATQLKEEGSDIKLGKLDATVHGEVSSKFEVRGYP 99


>U41542-6|AAK39152.1|  493|Caenorhabditis elegans Protein disulfide
           isomerase protein2, isoform a protein.
          Length = 493

 Score = 47.6 bits (108), Expect = 1e-05
 Identities = 24/51 (47%), Positives = 31/51 (60%), Gaps = 3/51 (5%)
 Frame = +3

Query: 111 IFTAIALLGLALGDE---VPTEENVLVLSKANFDXVISTTEYXPXEFYAPW 254
           +F  + L  L LG     +  EENV+VL+K NFD VI+  E+   EFYAPW
Sbjct: 1   MFRLVGLFFLVLGASAAVIEEEENVIVLTKDNFDEVINGNEFILVEFYAPW 51



 Score = 33.1 bits (72), Expect = 0.34
 Identities = 12/13 (92%), Positives = 12/13 (92%)
 Frame = +1

Query: 256 CGHCKSLAPEYXK 294
           CGHCKSLAPEY K
Sbjct: 52  CGHCKSLAPEYAK 64



 Score = 30.3 bits (65), Expect = 2.4
 Identities = 14/36 (38%), Positives = 20/36 (55%)
 Frame = +2

Query: 293 RXSTKLAEXXSPIXLAKXDAXXEXDLAXXXRVRGYP 400
           + +T+L E  S I L K DA    +++    VRGYP
Sbjct: 64  KAATQLKEEGSDIKLGKLDATVHGEVSSKFEVRGYP 99


>Z37139-1|CAA85491.1|  485|Caenorhabditis elegans Hypothetical
           protein C14B1.1 protein.
          Length = 485

 Score = 43.6 bits (98), Expect = 2e-04
 Identities = 20/44 (45%), Positives = 29/44 (65%)
 Frame = +3

Query: 123 IALLGLALGDEVPTEENVLVLSKANFDXVISTTEYXPXEFYAPW 254
           I LL  ++G  V   ENVLVL+++NF+  I+  E+   +FYAPW
Sbjct: 8   IFLLVASIGAVVADSENVLVLTESNFEETINGNEFVLVKFYAPW 51



 Score = 29.5 bits (63), Expect = 4.2
 Identities = 16/31 (51%), Positives = 16/31 (51%)
 Frame = +2

Query: 308 LAEXXSPIXLAKXDAXXEXDLAXXXRVRGYP 400
           L E  S I LAK DA     LA    VRGYP
Sbjct: 69  LKEEGSDIKLAKVDATENQALASKFEVRGYP 99


>U95074-1|AAB94647.1|  485|Caenorhabditis elegans protein disulphide
           isomerase isoformI protein.
          Length = 485

 Score = 43.6 bits (98), Expect = 2e-04
 Identities = 20/44 (45%), Positives = 29/44 (65%)
 Frame = +3

Query: 123 IALLGLALGDEVPTEENVLVLSKANFDXVISTTEYXPXEFYAPW 254
           I LL  ++G  V   ENVLVL+++NF+  I+  E+   +FYAPW
Sbjct: 8   IFLLVASIGAVVADSENVLVLTESNFEETINGNEFVLVKFYAPW 51



 Score = 29.5 bits (63), Expect = 4.2
 Identities = 16/31 (51%), Positives = 16/31 (51%)
 Frame = +2

Query: 308 LAEXXSPIXLAKXDAXXEXDLAXXXRVRGYP 400
           L E  S I LAK DA     LA    VRGYP
Sbjct: 69  LKEEGSDIKLAKVDATENQALASKFEVRGYP 99


>L15188-9|AAM22024.1|  618|Caenorhabditis elegans Hypothetical
           protein C14B9.2 protein.
          Length = 618

 Score = 36.7 bits (81), Expect = 0.027
 Identities = 16/32 (50%), Positives = 18/32 (56%)
 Frame = +3

Query: 159 PTEENVLVLSKANFDXVISTTEYXPXEFYAPW 254
           P  E V+ L+  NFD  IS  E    EFYAPW
Sbjct: 144 PPPEEVVTLTTENFDDFISNNELVLVEFYAPW 175



 Score = 31.5 bits (68), Expect = 1.0
 Identities = 11/13 (84%), Positives = 11/13 (84%)
 Frame = +1

Query: 256 CGHCKSLAPEYXK 294
           CGHCK LAPEY K
Sbjct: 176 CGHCKKLAPEYEK 188



 Score = 31.1 bits (67), Expect = 1.4
 Identities = 11/13 (84%), Positives = 11/13 (84%)
 Frame = +1

Query: 256 CGHCKSLAPEYXK 294
           CGHCK LAPEY K
Sbjct: 65  CGHCKHLAPEYEK 77



 Score = 29.9 bits (64), Expect = 3.2
 Identities = 12/30 (40%), Positives = 17/30 (56%)
 Frame = +3

Query: 165 EENVLVLSKANFDXVISTTEYXPXEFYAPW 254
           +E V+VL+  NFD  +        +FYAPW
Sbjct: 35  DEGVVVLTDKNFDAFLKKNPSVLVKFYAPW 64


>Z98866-5|CAB11548.1|  436|Caenorhabditis elegans Hypothetical
           protein Y49E10.4 protein.
          Length = 436

 Score = 31.5 bits (68), Expect = 1.0
 Identities = 11/13 (84%), Positives = 11/13 (84%)
 Frame = +1

Query: 256 CGHCKSLAPEYXK 294
           CGHCKSL PEY K
Sbjct: 54  CGHCKSLVPEYKK 66



 Score = 28.7 bits (61), Expect = 7.3
 Identities = 13/28 (46%), Positives = 20/28 (71%), Gaps = 1/28 (3%)
 Frame = +3

Query: 174 VLVLSKANFDX-VISTTEYXPXEFYAPW 254
           V+VL+ +NFD  V+++ E    EF+APW
Sbjct: 156 VVVLTDSNFDKLVLNSKEPWMVEFFAPW 183


>U40411-4|AAC47065.1|  440|Caenorhabditis elegans Temporarily
           assigned gene nameprotein 320 protein.
          Length = 440

 Score = 31.5 bits (68), Expect = 1.0
 Identities = 11/13 (84%), Positives = 11/13 (84%)
 Frame = +1

Query: 256 CGHCKSLAPEYXK 294
           CGHCKSL PEY K
Sbjct: 54  CGHCKSLVPEYKK 66



 Score = 29.1 bits (62), Expect = 5.5
 Identities = 13/31 (41%), Positives = 22/31 (70%), Gaps = 1/31 (3%)
 Frame = +3

Query: 165 EENVLVLSKANFDX-VISTTEYXPXEFYAPW 254
           +++V+ L++ANF   VI++ +    EFYAPW
Sbjct: 23  KDDVVELTEANFQSKVINSDDIWIVEFYAPW 53


>Z92970-1|CAB07480.1|  488|Caenorhabditis elegans Hypothetical
           protein H06O01.1 protein.
          Length = 488

 Score = 30.3 bits (65), Expect = 2.4
 Identities = 10/14 (71%), Positives = 13/14 (92%)
 Frame = +1

Query: 256 CGHCKSLAPEYXKV 297
           CGHCKSLAP+Y ++
Sbjct: 392 CGHCKSLAPKYEEL 405



 Score = 29.5 bits (63), Expect = 4.2
 Identities = 9/13 (69%), Positives = 11/13 (84%)
 Frame = +1

Query: 256 CGHCKSLAPEYXK 294
           CGHCK +APEY +
Sbjct: 49  CGHCKKIAPEYER 61



 Score = 29.1 bits (62), Expect = 5.5
 Identities = 12/27 (44%), Positives = 16/27 (59%)
 Frame = +3

Query: 174 VLVLSKANFDXVISTTEYXPXEFYAPW 254
           VL  +  NFD +I T +    +FYAPW
Sbjct: 22  VLEYTDGNFDDLIQTHDIALVKFYAPW 48


>AB072567-1|BAB88817.1|  488|Caenorhabditis elegans ceERp57 protein.
          Length = 488

 Score = 30.3 bits (65), Expect = 2.4
 Identities = 10/14 (71%), Positives = 13/14 (92%)
 Frame = +1

Query: 256 CGHCKSLAPEYXKV 297
           CGHCKSLAP+Y ++
Sbjct: 392 CGHCKSLAPKYEEL 405



 Score = 29.5 bits (63), Expect = 4.2
 Identities = 9/13 (69%), Positives = 11/13 (84%)
 Frame = +1

Query: 256 CGHCKSLAPEYXK 294
           CGHCK +APEY +
Sbjct: 49  CGHCKKIAPEYER 61



 Score = 29.1 bits (62), Expect = 5.5
 Identities = 12/27 (44%), Positives = 16/27 (59%)
 Frame = +3

Query: 174 VLVLSKANFDXVISTTEYXPXEFYAPW 254
           VL  +  NFD +I T +    +FYAPW
Sbjct: 22  VLEYTDGNFDDLIQTHDIALVKFYAPW 48


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,513,812
Number of Sequences: 27780
Number of extensions: 143918
Number of successful extensions: 269
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 215
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 269
length of database: 12,740,198
effective HSP length: 82
effective length of database: 10,462,238
effective search space used: 2782955308
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)