Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP17_F_B02
(900 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X54473-1|CAA38352.1| 86|Homo sapiens cytochrome oxidase subuni... 52 3e-06
X13923-1|CAA32114.1| 86|Homo sapiens protein ( Human mRNA for ... 52 3e-06
CR542137-1|CAG46934.1| 86|Homo sapiens COX6B protein. 52 3e-06
CR456789-1|CAG33070.1| 86|Homo sapiens COX6B protein. 52 3e-06
BT006945-1|AAP35591.1| 86|Homo sapiens cytochrome c oxidase su... 52 3e-06
BC002478-1|AAH02478.1| 86|Homo sapiens cytochrome c oxidase su... 52 3e-06
BC001015-1|AAH01015.1| 86|Homo sapiens cytochrome c oxidase su... 52 3e-06
AC002115-3|AAB57628.1| 86|Homo sapiens COXG protein. 52 3e-06
BC100902-1|AAI00903.1| 88|Homo sapiens COX6B2 protein protein. 42 0.003
BC100901-1|AAI00902.1| 88|Homo sapiens cytochrome c oxidase su... 42 0.003
BC100900-1|AAI00901.1| 88|Homo sapiens cytochrome c oxidase su... 42 0.003
BC100899-1|AAI00900.1| 88|Homo sapiens cytochrome c oxidase su... 42 0.003
BC064548-1|AAH64548.1| 88|Homo sapiens cytochrome c oxidase su... 42 0.003
BC026123-1|AAH26123.3| 88|Homo sapiens cytochrome c oxidase su... 42 0.003
AY152398-1|AAN46751.1| 88|Homo sapiens cytochrome c oxidase su... 42 0.003
AL031594-1|CAI21907.1| 108|Homo sapiens protein ( Human DNA seq... 34 0.81
AY885252-1|AAW62254.1| 569|Homo sapiens matrix metalloproteinas... 32 2.5
AY121358-1|AAM78033.1| 569|Homo sapiens MMP21 protein protein. 32 2.5
AL360176-1|CAI12086.1| 569|Homo sapiens matrix metallopeptidase... 32 2.5
AL158835-1|CAH73211.1| 569|Homo sapiens matrix metallopeptidase... 32 2.5
AF520613-1|AAM75352.1| 569|Homo sapiens matrix metalloproteinas... 32 2.5
AF331526-1|AAM92903.1| 569|Homo sapiens putative matrix metallo... 32 2.5
AK127688-1|BAC87085.1| 129|Homo sapiens protein ( Homo sapiens ... 31 5.7
X58139-1|CAA41147.1| 17|Homo sapiens cytochrome-c oxidase prot... 31 7.5
>X54473-1|CAA38352.1| 86|Homo sapiens cytochrome oxidase subunit
VIb protein.
Length = 86
Score = 52.0 bits (119), Expect = 3e-06
Identities = 20/29 (68%), Positives = 23/29 (79%)
Frame = +3
Query: 279 RRVYRSLCPNEWVDKWDNQRAEGTFAGRI 365
+RVY+SLCP WV WD QRAEGTF G+I
Sbjct: 58 QRVYQSLCPTSWVTDWDEQRAEGTFPGKI 86
>X13923-1|CAA32114.1| 86|Homo sapiens protein ( Human mRNA for
cytochrome c oxidase subunit VIb (EC 1.9.3.1). ).
Length = 86
Score = 52.0 bits (119), Expect = 3e-06
Identities = 20/29 (68%), Positives = 23/29 (79%)
Frame = +3
Query: 279 RRVYRSLCPNEWVDKWDNQRAEGTFAGRI 365
+RVY+SLCP WV WD QRAEGTF G+I
Sbjct: 58 QRVYQSLCPTSWVTDWDEQRAEGTFPGKI 86
>CR542137-1|CAG46934.1| 86|Homo sapiens COX6B protein.
Length = 86
Score = 52.0 bits (119), Expect = 3e-06
Identities = 20/29 (68%), Positives = 23/29 (79%)
Frame = +3
Query: 279 RRVYRSLCPNEWVDKWDNQRAEGTFAGRI 365
+RVY+SLCP WV WD QRAEGTF G+I
Sbjct: 58 QRVYQSLCPTSWVTDWDEQRAEGTFPGKI 86
>CR456789-1|CAG33070.1| 86|Homo sapiens COX6B protein.
Length = 86
Score = 52.0 bits (119), Expect = 3e-06
Identities = 20/29 (68%), Positives = 23/29 (79%)
Frame = +3
Query: 279 RRVYRSLCPNEWVDKWDNQRAEGTFAGRI 365
+RVY+SLCP WV WD QRAEGTF G+I
Sbjct: 58 QRVYQSLCPTSWVTDWDEQRAEGTFPGKI 86
>BT006945-1|AAP35591.1| 86|Homo sapiens cytochrome c oxidase
subunit VIb protein.
Length = 86
Score = 52.0 bits (119), Expect = 3e-06
Identities = 20/29 (68%), Positives = 23/29 (79%)
Frame = +3
Query: 279 RRVYRSLCPNEWVDKWDNQRAEGTFAGRI 365
+RVY+SLCP WV WD QRAEGTF G+I
Sbjct: 58 QRVYQSLCPTSWVTDWDEQRAEGTFPGKI 86
>BC002478-1|AAH02478.1| 86|Homo sapiens cytochrome c oxidase
subunit Vib polypeptide 1 (ubiquitous) protein.
Length = 86
Score = 52.0 bits (119), Expect = 3e-06
Identities = 20/29 (68%), Positives = 23/29 (79%)
Frame = +3
Query: 279 RRVYRSLCPNEWVDKWDNQRAEGTFAGRI 365
+RVY+SLCP WV WD QRAEGTF G+I
Sbjct: 58 QRVYQSLCPTSWVTDWDEQRAEGTFPGKI 86
>BC001015-1|AAH01015.1| 86|Homo sapiens cytochrome c oxidase
subunit Vib polypeptide 1 (ubiquitous) protein.
Length = 86
Score = 52.0 bits (119), Expect = 3e-06
Identities = 20/29 (68%), Positives = 23/29 (79%)
Frame = +3
Query: 279 RRVYRSLCPNEWVDKWDNQRAEGTFAGRI 365
+RVY+SLCP WV WD QRAEGTF G+I
Sbjct: 58 QRVYQSLCPTSWVTDWDEQRAEGTFPGKI 86
>AC002115-3|AAB57628.1| 86|Homo sapiens COXG protein.
Length = 86
Score = 52.0 bits (119), Expect = 3e-06
Identities = 20/29 (68%), Positives = 23/29 (79%)
Frame = +3
Query: 279 RRVYRSLCPNEWVDKWDNQRAEGTFAGRI 365
+RVY+SLCP WV WD QRAEGTF G+I
Sbjct: 58 QRVYQSLCPTSWVTDWDEQRAEGTFPGKI 86
>BC100902-1|AAI00903.1| 88|Homo sapiens COX6B2 protein protein.
Length = 88
Score = 41.9 bits (94), Expect = 0.003
Identities = 16/28 (57%), Positives = 19/28 (67%)
Frame = +3
Query: 282 RVYRSLCPNEWVDKWDNQRAEGTFAGRI 365
RVY SLCP WV+ W+ Q G FAG+I
Sbjct: 61 RVYHSLCPISWVESWNEQIKNGIFAGKI 88
>BC100901-1|AAI00902.1| 88|Homo sapiens cytochrome c oxidase
subunit VIb polypeptide 2 (testis) protein.
Length = 88
Score = 41.9 bits (94), Expect = 0.003
Identities = 16/28 (57%), Positives = 19/28 (67%)
Frame = +3
Query: 282 RVYRSLCPNEWVDKWDNQRAEGTFAGRI 365
RVY SLCP WV+ W+ Q G FAG+I
Sbjct: 61 RVYHSLCPISWVESWNEQIKNGIFAGKI 88
>BC100900-1|AAI00901.1| 88|Homo sapiens cytochrome c oxidase
subunit VIb polypeptide 2 (testis) protein.
Length = 88
Score = 41.9 bits (94), Expect = 0.003
Identities = 16/28 (57%), Positives = 19/28 (67%)
Frame = +3
Query: 282 RVYRSLCPNEWVDKWDNQRAEGTFAGRI 365
RVY SLCP WV+ W+ Q G FAG+I
Sbjct: 61 RVYHSLCPISWVESWNEQIKNGIFAGKI 88
>BC100899-1|AAI00900.1| 88|Homo sapiens cytochrome c oxidase
subunit VIb polypeptide 2 (testis) protein.
Length = 88
Score = 41.9 bits (94), Expect = 0.003
Identities = 16/28 (57%), Positives = 19/28 (67%)
Frame = +3
Query: 282 RVYRSLCPNEWVDKWDNQRAEGTFAGRI 365
RVY SLCP WV+ W+ Q G FAG+I
Sbjct: 61 RVYHSLCPISWVESWNEQIKNGIFAGKI 88
>BC064548-1|AAH64548.1| 88|Homo sapiens cytochrome c oxidase
subunit VIb polypeptide 2 (testis) protein.
Length = 88
Score = 41.9 bits (94), Expect = 0.003
Identities = 16/28 (57%), Positives = 19/28 (67%)
Frame = +3
Query: 282 RVYRSLCPNEWVDKWDNQRAEGTFAGRI 365
RVY SLCP WV+ W+ Q G FAG+I
Sbjct: 61 RVYHSLCPISWVESWNEQIKNGIFAGKI 88
>BC026123-1|AAH26123.3| 88|Homo sapiens cytochrome c oxidase
subunit VIb polypeptide 2 (testis) protein.
Length = 88
Score = 41.9 bits (94), Expect = 0.003
Identities = 16/28 (57%), Positives = 19/28 (67%)
Frame = +3
Query: 282 RVYRSLCPNEWVDKWDNQRAEGTFAGRI 365
RVY SLCP WV+ W+ Q G FAG+I
Sbjct: 61 RVYHSLCPISWVESWNEQIKNGIFAGKI 88
>AY152398-1|AAN46751.1| 88|Homo sapiens cytochrome c oxidase
subunit VIb testes-specific isoform precursor protein.
Length = 88
Score = 41.9 bits (94), Expect = 0.003
Identities = 16/28 (57%), Positives = 19/28 (67%)
Frame = +3
Query: 282 RVYRSLCPNEWVDKWDNQRAEGTFAGRI 365
RVY SLCP WV+ W+ Q G FAG+I
Sbjct: 61 RVYHSLCPISWVESWNEQIKNGIFAGKI 88
>AL031594-1|CAI21907.1| 108|Homo sapiens protein ( Human DNA
sequence from clone RP4-591N18 on chromosome
22q13.1-13.2.33 Contains the C22orf34 gene for
chromosome 22 open reading frame 34. ).
Length = 108
Score = 33.9 bits (74), Expect = 0.81
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = +3
Query: 279 RRVYRSLCPNEWVDKWDNQRAEGTFAGR 362
+ VY+SLCP W WD+ + F GR
Sbjct: 59 QHVYKSLCPIPWASAWDDHGQKAHFLGR 86
>AY885252-1|AAW62254.1| 569|Homo sapiens matrix metalloproteinase
21 protein.
Length = 569
Score = 32.3 bits (70), Expect = 2.5
Identities = 15/41 (36%), Positives = 20/41 (48%)
Frame = +2
Query: 89 PRLXPXPPSAXVXSXRPPSLKXAPFAPRXPFTXIRRGTAPK 211
P + P PPSA PP + +PR P + RRG P+
Sbjct: 120 PDMRPPPPSAPPSPPGPPPRARSRRSPRAPLSLSRRGWQPR 160
>AY121358-1|AAM78033.1| 569|Homo sapiens MMP21 protein protein.
Length = 569
Score = 32.3 bits (70), Expect = 2.5
Identities = 15/41 (36%), Positives = 20/41 (48%)
Frame = +2
Query: 89 PRLXPXPPSAXVXSXRPPSLKXAPFAPRXPFTXIRRGTAPK 211
P + P PPSA PP + +PR P + RRG P+
Sbjct: 120 PDMRPPPPSAPPSPPGPPPRARSRRSPRAPLSLSRRGWQPR 160
>AL360176-1|CAI12086.1| 569|Homo sapiens matrix metallopeptidase 21
protein.
Length = 569
Score = 32.3 bits (70), Expect = 2.5
Identities = 15/41 (36%), Positives = 20/41 (48%)
Frame = +2
Query: 89 PRLXPXPPSAXVXSXRPPSLKXAPFAPRXPFTXIRRGTAPK 211
P + P PPSA PP + +PR P + RRG P+
Sbjct: 120 PDMRPPPPSAPPSPPGPPPRARSRRSPRAPLSLSRRGWQPR 160
>AL158835-1|CAH73211.1| 569|Homo sapiens matrix metallopeptidase 21
protein.
Length = 569
Score = 32.3 bits (70), Expect = 2.5
Identities = 15/41 (36%), Positives = 20/41 (48%)
Frame = +2
Query: 89 PRLXPXPPSAXVXSXRPPSLKXAPFAPRXPFTXIRRGTAPK 211
P + P PPSA PP + +PR P + RRG P+
Sbjct: 120 PDMRPPPPSAPPSPPGPPPRARSRRSPRAPLSLSRRGWQPR 160
>AF520613-1|AAM75352.1| 569|Homo sapiens matrix
metalloproteinase-21 protein.
Length = 569
Score = 32.3 bits (70), Expect = 2.5
Identities = 15/41 (36%), Positives = 20/41 (48%)
Frame = +2
Query: 89 PRLXPXPPSAXVXSXRPPSLKXAPFAPRXPFTXIRRGTAPK 211
P + P PPSA PP + +PR P + RRG P+
Sbjct: 120 PDMRPPPPSAPPSPPGPPPRARSRRSPRAPLSLSRRGWQPR 160
>AF331526-1|AAM92903.1| 569|Homo sapiens putative matrix
metalloproteinase protein.
Length = 569
Score = 32.3 bits (70), Expect = 2.5
Identities = 15/41 (36%), Positives = 20/41 (48%)
Frame = +2
Query: 89 PRLXPXPPSAXVXSXRPPSLKXAPFAPRXPFTXIRRGTAPK 211
P + P PPSA PP + +PR P + RRG P+
Sbjct: 120 PDMRPPPPSAPPSPPGPPPRARSRRSPRAPLSLSRRGWQPR 160
>AK127688-1|BAC87085.1| 129|Homo sapiens protein ( Homo sapiens
cDNA FLJ45786 fis, clone NETRP2008488. ).
Length = 129
Score = 31.1 bits (67), Expect = 5.7
Identities = 15/34 (44%), Positives = 21/34 (61%), Gaps = 1/34 (2%)
Frame = -1
Query: 390 KHRERLG-SKSYRRRCLRRAGCPTCRPTHWGRET 292
K R++ G K RR+ LR+A CP+ RP G +T
Sbjct: 58 KGRQKAGLEKGNRRKELRQANCPSLRPQRKGADT 91
>X58139-1|CAA41147.1| 17|Homo sapiens cytochrome-c oxidase
protein.
Length = 17
Score = 30.7 bits (66), Expect = 7.5
Identities = 12/17 (70%), Positives = 13/17 (76%)
Frame = +3
Query: 315 VDKWDNQRAEGTFAGRI 365
V WD QRAEGTF G+I
Sbjct: 1 VTDWDEQRAEGTFPGKI 17
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 69,452,485
Number of Sequences: 237096
Number of extensions: 1240998
Number of successful extensions: 4346
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 3853
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4276
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11603768198
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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