Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP17_F_B02
         (900 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014298-2928|AAN09514.1|   77|Drosophila melanogaster CG14235-P...    54   4e-07
AE014298-2927|AAN09513.1|   77|Drosophila melanogaster CG14235-P...    54   4e-07
AE014298-2926|AAF49015.2|   96|Drosophila melanogaster CG14235-P...    54   4e-07
AE014134-2820|ABI31319.1|  122|Drosophila melanogaster CG34106-P...    32   0.93 

>AE014298-2928|AAN09514.1|   77|Drosophila melanogaster CG14235-PC,
           isoform C protein.
          Length = 77

 Score = 53.6 bits (123), Expect = 4e-07
 Identities = 19/29 (65%), Positives = 25/29 (86%)
 Frame = +3

Query: 279 RRVYRSLCPNEWVDKWDNQRAEGTFAGRI 365
           ++VY+S+CPN WV+KWD+QR  GTF GRI
Sbjct: 49  QKVYKSMCPNAWVEKWDDQRESGTFPGRI 77


>AE014298-2927|AAN09513.1|   77|Drosophila melanogaster CG14235-PB,
           isoform B protein.
          Length = 77

 Score = 53.6 bits (123), Expect = 4e-07
 Identities = 19/29 (65%), Positives = 25/29 (86%)
 Frame = +3

Query: 279 RRVYRSLCPNEWVDKWDNQRAEGTFAGRI 365
           ++VY+S+CPN WV+KWD+QR  GTF GRI
Sbjct: 49  QKVYKSMCPNAWVEKWDDQRESGTFPGRI 77


>AE014298-2926|AAF49015.2|   96|Drosophila melanogaster CG14235-PA,
           isoform A protein.
          Length = 96

 Score = 53.6 bits (123), Expect = 4e-07
 Identities = 19/29 (65%), Positives = 25/29 (86%)
 Frame = +3

Query: 279 RRVYRSLCPNEWVDKWDNQRAEGTFAGRI 365
           ++VY+S+CPN WV+KWD+QR  GTF GRI
Sbjct: 68  QKVYKSMCPNAWVEKWDDQRESGTFPGRI 96


>AE014134-2820|ABI31319.1|  122|Drosophila melanogaster CG34106-PA
           protein.
          Length = 122

 Score = 32.3 bits (70), Expect = 0.93
 Identities = 14/27 (51%), Positives = 19/27 (70%)
 Frame = -1

Query: 405 NRNKLKHRERLGSKSYRRRCLRRAGCP 325
           NRN+LK   R+ +KSY+RR  RR+  P
Sbjct: 67  NRNRLKEEHRVNTKSYKRRERRRSHRP 93


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,072,896
Number of Sequences: 53049
Number of extensions: 367027
Number of successful extensions: 1283
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1133
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1271
length of database: 24,988,368
effective HSP length: 85
effective length of database: 20,479,203
effective search space used: 4382549442
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)