Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP17_F_A11
         (854 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z98883-2|CAM26442.1|  760|Homo sapiens phosphatidylinositol glyc...    34   0.76 
BC006377-1|AAH06377.1|  760|Homo sapiens phosphatidylinositol gl...    34   0.76 

>Z98883-2|CAM26442.1|  760|Homo sapiens phosphatidylinositol glycan
           anchor biosynthesis, class Q protein.
          Length = 760

 Score = 33.9 bits (74), Expect = 0.76
 Identities = 25/85 (29%), Positives = 32/85 (37%), Gaps = 9/85 (10%)
 Frame = -1

Query: 539 PLRRPAX*XWAXWGWPLGEFLIANALGAQXXXVIVEQXDXACDAEXXPEAGN-------- 384
           P ++P    W+ WG P G  L     G         +   A  AE  P +G         
Sbjct: 676 PPQQPQVEGWSPWGLPSGSALAVGVEGPCQDEPPSPRHPLAPSAEQHPASGGLKQSLTPV 735

Query: 383 -AGPGQTQPXPVYVXLERXPAEAAL 312
            +GPG + P P  V L   P E AL
Sbjct: 736 PSGPGPSLPEPHGVYLRMFPGEVAL 760


>BC006377-1|AAH06377.1|  760|Homo sapiens phosphatidylinositol
           glycan anchor biosynthesis, class Q protein.
          Length = 760

 Score = 33.9 bits (74), Expect = 0.76
 Identities = 25/85 (29%), Positives = 32/85 (37%), Gaps = 9/85 (10%)
 Frame = -1

Query: 539 PLRRPAX*XWAXWGWPLGEFLIANALGAQXXXVIVEQXDXACDAEXXPEAGN-------- 384
           P ++P    W+ WG P G  L     G         +   A  AE  P +G         
Sbjct: 676 PPQQPQVEGWSPWGLPSGSALAVGVEGPCQDEPPSPRHPLAPSAEQHPASGGLKQSLTPV 735

Query: 383 -AGPGQTQPXPVYVXLERXPAEAAL 312
            +GPG + P P  V L   P E AL
Sbjct: 736 PSGPGPSLPEPHGVYLRMFPGEVAL 760


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 67,723,571
Number of Sequences: 237096
Number of extensions: 828948
Number of successful extensions: 9357
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 9338
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9357
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10872716010
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)