Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP16_F_P23
         (926 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439353-12|CAD27934.1|  160|Anopheles gambiae putative MLC1 pro...    50   1e-07
AB090820-2|BAC57916.1| 1222|Anopheles gambiae reverse transcript...    25   3.3  
EF990671-1|ABS30732.1| 1256|Anopheles gambiae voltage-gated calc...    24   7.5  
AY705396-1|AAU12505.1|  710|Anopheles gambiae nicotinic acetylch...    23   9.9  

>AJ439353-12|CAD27934.1|  160|Anopheles gambiae putative MLC1
           protein protein.
          Length = 160

 Score = 49.6 bits (113), Expect = 1e-07
 Identities = 33/135 (24%), Positives = 60/135 (44%), Gaps = 2/135 (1%)
 Frame = +2

Query: 158 FQMFDTTKSGYIDVLKISTILNTMGQLFDDSELQALIDENDPENSGKINFDGFCNIASHF 337
           F ++D   SG +D + +   L  +  L    EL   +         KI F+ F  I S  
Sbjct: 17  FSVYDWEGSGQMDAMDLGNALRALN-LNPTIELIGKMGGTQKRGEKKIKFEEFLPIFSQV 75

Query: 338 LEEEDAEAMQQELKEAFRLYDREGNGYITTSTLKEILAALDDKLSNADLDGIXAEI--DT 511
            +E++    +  L E  +LYD+  +G +  + L   L AL ++L + +LD +  +     
Sbjct: 76  KKEKEQGCFEDFL-ECLKLYDKNEDGTMLLAELTHSLTALGERLDDVELDNVMKDCMDPE 134

Query: 512 DGSGTVDFDEFMEMM 556
           D  G + +  F++ M
Sbjct: 135 DDDGNIPYAPFLKKM 149


>AB090820-2|BAC57916.1| 1222|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1222

 Score = 25.0 bits (52), Expect = 3.3
 Identities = 10/29 (34%), Positives = 16/29 (55%)
 Frame = -3

Query: 117 IHVARQGLAAVTRTESVCECCYTSKS*GI 31
           + V + G+AA    + +  CCY S S G+
Sbjct: 68  VSVTQSGIAAARINDVLFICCYVSPSAGV 96



 Score = 23.8 bits (49), Expect = 7.5
 Identities = 10/23 (43%), Positives = 12/23 (52%)
 Frame = +1

Query: 145 AA*SIPDV*HHEVWLHRRAEDLH 213
           AA + P    + VW HR   DLH
Sbjct: 889 AAAAAPTASRYAVWAHRMIPDLH 911


>EF990671-1|ABS30732.1| 1256|Anopheles gambiae voltage-gated calcium
           channel alpha2-delta subunit 1 protein.
          Length = 1256

 Score = 23.8 bits (49), Expect = 7.5
 Identities = 18/78 (23%), Positives = 37/78 (47%), Gaps = 1/78 (1%)
 Frame = +2

Query: 218 LNTMGQLFDDSELQALIDENDPEN-SGKINFDGFCNIASHFLEEEDAEAMQQELKEAFRL 394
           +N + ++ D +E QA + E+DPE+ + K +   F + A    E +    + +  ++    
Sbjct: 109 MNAVMRIMDSAE-QAALSESDPESATSKAHPSAFYD-ARRINEYQSDGRLAEGSRQMLLR 166

Query: 395 YDREGNGYITTSTLKEIL 448
           + R   GY    +L  +L
Sbjct: 167 HMRRFEGYPVNISLSSVL 184


>AY705396-1|AAU12505.1|  710|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 3 protein.
          Length = 710

 Score = 23.4 bits (48), Expect = 9.9
 Identities = 10/32 (31%), Positives = 18/32 (56%)
 Frame = +2

Query: 308 DGFCNIASHFLEEEDAEAMQQELKEAFRLYDR 403
           DG   IA H  +EE++  ++++ K    + DR
Sbjct: 627 DGVTYIADHTRKEEESSRVKEDWKYVAMVLDR 658


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 678,324
Number of Sequences: 2352
Number of extensions: 11856
Number of successful extensions: 56
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 53
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 55
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 100882044
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)