Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP16_F_P16
         (925 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             28   0.14 
AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.       25   0.97 
D79208-1|BAA11466.1|  567|Apis mellifera alpha-glucosidase protein.    23   5.2  
AB253417-1|BAE86928.1|  567|Apis mellifera alpha-glucosidase pro...    23   5.2  
DQ667187-1|ABG75739.1|  428|Apis mellifera histamine-gated chlor...    22   6.8  
DQ015969-1|AAY81926.1|  397|Apis mellifera stargazin related pro...    22   6.8  

>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 27.9 bits (59), Expect = 0.14
 Identities = 14/32 (43%), Positives = 20/32 (62%)
 Frame = +3

Query: 126 PPARASLNYPRTLLTKTSRRNCTTASSPATTT 221
           PPA +S + P T+ T T+    TTA++ AT T
Sbjct: 96  PPA-SSTSLPATITTTTTTTTTTTATAAATAT 126


>AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.
          Length = 735

 Score = 25.0 bits (52), Expect = 0.97
 Identities = 13/41 (31%), Positives = 13/41 (31%)
 Frame = +2

Query: 743 PXSLHPXXPPLXXXPPXPPXXPXPPPPXXPXXPXXPPXXXP 865
           P S  P   P     P  P    PP P     P  PP   P
Sbjct: 16  PSSGAPGPQPSPHQSPQAPQRGSPPNPSQGPPPGGPPGAPP 56



 Score = 21.8 bits (44), Expect = 9.0
 Identities = 11/41 (26%), Positives = 13/41 (31%)
 Frame = +1

Query: 691 PXXXSXXPXPXXSXXPXSPLPPSXXXPPXXXXPXTPXXPPP 813
           P   +  P P     P +P   S   P     P  P   PP
Sbjct: 16  PSSGAPGPQPSPHQSPQAPQRGSPPNPSQGPPPGGPPGAPP 56


>D79208-1|BAA11466.1|  567|Apis mellifera alpha-glucosidase protein.
          Length = 567

 Score = 22.6 bits (46), Expect = 5.2
 Identities = 13/44 (29%), Positives = 19/44 (43%)
 Frame = -2

Query: 192 YSFSSRSWLEVSADSSTTPALAASMHIANTTEKFHFVRSLSRSP 61
           +S SS +WL V+ +  T    A      +    F    SL +SP
Sbjct: 430 FSSSSNTWLRVNENYKTVNLAAEKKDKNSFFNMFKKFASLKKSP 473


>AB253417-1|BAE86928.1|  567|Apis mellifera alpha-glucosidase
           protein.
          Length = 567

 Score = 22.6 bits (46), Expect = 5.2
 Identities = 13/44 (29%), Positives = 19/44 (43%)
 Frame = -2

Query: 192 YSFSSRSWLEVSADSSTTPALAASMHIANTTEKFHFVRSLSRSP 61
           +S SS +WL V+ +  T    A      +    F    SL +SP
Sbjct: 430 FSSSSNTWLRVNENYKTVNLAAEKKDKNSFFNMFKKFASLKKSP 473


>DQ667187-1|ABG75739.1|  428|Apis mellifera histamine-gated chloride
           channel protein.
          Length = 428

 Score = 22.2 bits (45), Expect = 6.8
 Identities = 7/11 (63%), Positives = 7/11 (63%)
 Frame = +1

Query: 787 PXTPXXPPPPP 819
           P  P  PPPPP
Sbjct: 338 PPKPAPPPPPP 348



 Score = 21.8 bits (44), Expect = 9.0
 Identities = 7/10 (70%), Positives = 7/10 (70%)
 Frame = +1

Query: 793 TPXXPPPPPP 822
           TP  P PPPP
Sbjct: 337 TPPKPAPPPP 346


>DQ015969-1|AAY81926.1|  397|Apis mellifera stargazin related
           protein STG-1 protein.
          Length = 397

 Score = 22.2 bits (45), Expect = 6.8
 Identities = 11/32 (34%), Positives = 11/32 (34%)
 Frame = -1

Query: 898 GGXGXXXXXXXGXXXGGGGXXXGXXXGGGXGG 803
           GG G            GG    G   GGG GG
Sbjct: 20  GGPGSSSAGGVVTGASGGSIVVGANNGGGGGG 51


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 235,067
Number of Sequences: 438
Number of extensions: 6740
Number of successful extensions: 21
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 30113811
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)