Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP16_F_P14
(916 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (gr... 34 0.16
U39852-7|AAK39260.1| 240|Caenorhabditis elegans Ground-like (gr... 33 0.28
U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical pr... 33 0.38
Z93393-1|CAB07688.1| 497|Caenorhabditis elegans Hypothetical pr... 32 0.50
AF535160-1|AAN33048.1| 468|Caenorhabditis elegans UNC-34 protein. 32 0.50
AC025722-6|AAO12398.1| 310|Caenorhabditis elegans Uncoordinated... 32 0.50
AC025722-5|AAO12397.1| 454|Caenorhabditis elegans Uncoordinated... 32 0.50
U10438-9|AAU87834.1| 616|Caenorhabditis elegans Hypothetical pr... 32 0.66
AF098500-3|ABD94103.1| 774|Caenorhabditis elegans Temporarily a... 32 0.66
AF098500-2|AAC67399.2| 996|Caenorhabditis elegans Temporarily a... 32 0.66
U41543-12|AAZ91345.1| 401|Caenorhabditis elegans Groundhog (hed... 31 0.87
AF106580-3|AAC78205.1| 881|Caenorhabditis elegans Temporarily a... 31 0.87
AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical ... 31 0.87
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 31 1.5
Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical pr... 31 1.5
Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical pr... 31 1.5
U50310-5|AAA92541.1| 318|Caenorhabditis elegans Ground-like (gr... 31 1.5
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 31 1.5
U23515-9|AAP82644.1| 360|Caenorhabditis elegans Hypothetical pr... 31 1.5
U23515-8|AAP82645.1| 362|Caenorhabditis elegans Hypothetical pr... 31 1.5
L25598-4|AAV58888.1| 737|Caenorhabditis elegans Calpain family ... 31 1.5
L25598-3|AAM15551.1| 759|Caenorhabditis elegans Calpain family ... 31 1.5
AF025467-2|AAN65301.1| 505|Caenorhabditis elegans Hypothetical ... 30 2.7
AF025467-1|AAB71039.2| 528|Caenorhabditis elegans Hypothetical ... 30 2.7
Z81135-1|CAB03453.1| 627|Caenorhabditis elegans Hypothetical pr... 29 3.5
Z68008-5|CAD91696.1| 1160|Caenorhabditis elegans Hypothetical pr... 29 3.5
L25598-2|AAV58887.1| 780|Caenorhabditis elegans Calpain family ... 29 3.5
D10877-1|BAA01645.1| 346|Caenorhabditis elegans hnRNP like prot... 29 3.5
AY438643-1|AAR00670.1| 627|Caenorhabditis elegans abnormal DAue... 29 3.5
AL023835-10|CAA19494.2| 691|Caenorhabditis elegans Hypothetical... 29 3.5
AF101316-1|AAC69231.1| 684|Caenorhabditis elegans Hypothetical ... 29 3.5
AF043706-2|AAB97604.2| 730|Caenorhabditis elegans Hypothetical ... 29 3.5
AF038613-7|ABB51185.1| 308|Caenorhabditis elegans Human hnrnp a... 29 3.5
AF038613-5|AAB92051.1| 346|Caenorhabditis elegans Human hnrnp a... 29 3.5
Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical pr... 29 4.6
AF067607-3|AAF98607.1| 590|Caenorhabditis elegans Hypothetical ... 29 4.6
AF000193-3|AAB52890.1| 259|Caenorhabditis elegans Hypothetical ... 29 4.6
AC024777-5|AAF60564.1| 506|Caenorhabditis elegans Hypothetical ... 29 4.6
Z81560-2|CAB04547.1| 1021|Caenorhabditis elegans Hypothetical pr... 29 6.1
AF101316-2|AAC69230.1| 692|Caenorhabditis elegans Hypothetical ... 29 6.1
AC024790-13|AAL32247.1| 311|Caenorhabditis elegans Hypothetical... 29 6.1
Z50875-1|CAA90776.1| 1872|Caenorhabditis elegans Hypothetical pr... 28 8.1
U97005-10|AAK72084.1| 646|Caenorhabditis elegans Hypothetical p... 28 8.1
U64857-2|AAC25867.1| 1558|Caenorhabditis elegans Hypothetical pr... 28 8.1
U64857-1|AAC25868.1| 2167|Caenorhabditis elegans Hypothetical pr... 28 8.1
AL021180-3|CAA15982.1| 1872|Caenorhabditis elegans Hypothetical ... 28 8.1
>U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (grd
related) protein 4 protein.
Length = 210
Score = 33.9 bits (74), Expect = 0.16
Identities = 17/42 (40%), Positives = 18/42 (42%)
Frame = +3
Query: 705 PPXPXQLXXRILXPPTP*XNIXFIXPPXXPXXPPPPPXXPXP 830
PP P + PP P F PP P PPPPP P P
Sbjct: 33 PPPPMCAPPPLPCPPPPICPPQFCPPP--PMCPPPPPPPPPP 72
Score = 29.9 bits (64), Expect = 2.7
Identities = 12/28 (42%), Positives = 15/28 (53%)
Frame = +1
Query: 733 EYWXPPPLX*IXXSYXPPXPPXXPPPPP 816
++ PPP+ PP PP PPPPP
Sbjct: 54 QFCPPPPMC--PPPPPPPPPPMCPPPPP 79
>U39852-7|AAK39260.1| 240|Caenorhabditis elegans Ground-like (grd
related) protein 6 protein.
Length = 240
Score = 33.1 bits (72), Expect = 0.28
Identities = 16/47 (34%), Positives = 18/47 (38%)
Frame = +3
Query: 690 RSXXAPPXPXQLXXRILXPPTP*XNIXFIXPPXXPXXPPPPPXXPXP 830
R A P P + + PP P PP P PPPP P P
Sbjct: 38 RMPCAAPMPMPMPMPVCPPPPPCPAQFCPPPPICPPPPPPPMPCPPP 84
Score = 29.1 bits (62), Expect = 4.6
Identities = 13/30 (43%), Positives = 15/30 (50%)
Frame = +1
Query: 733 EYWXPPPLX*IXXSYXPPXPPXXPPPPPXP 822
++ PPP I PP P PPPPP P
Sbjct: 63 QFCPPPP---ICPPPPPPPMPCPPPPPPMP 89
Score = 28.7 bits (61), Expect = 6.1
Identities = 12/25 (48%), Positives = 13/25 (52%)
Frame = +1
Query: 748 PPLX*IXXSYXPPXPPXXPPPPPXP 822
PP + PP PP PPPPP P
Sbjct: 55 PPPPPCPAQFCPP-PPICPPPPPPP 78
>U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical
protein R04E5.8a protein.
Length = 997
Score = 32.7 bits (71), Expect = 0.38
Identities = 19/49 (38%), Positives = 21/49 (42%)
Frame = +3
Query: 669 PREGDPRRSXXAPPXPXQLXXRILXPPTP*XNIXFIXPPXXPXXPPPPP 815
PR PRR PP P + R PP+P PP P P PPP
Sbjct: 152 PRSPPPRRPPMTPPSPQRRPPRT--PPSPEPR----NPPRTPPSPIPPP 194
Score = 29.9 bits (64), Expect = 2.7
Identities = 17/55 (30%), Positives = 20/55 (36%), Gaps = 1/55 (1%)
Frame = +3
Query: 669 PREGDPRRSXXAPPXPXQ-LXXRILXPPTP*XNIXFIXPPXXPXXPPPPPXXPXP 830
P+ GD S PP P + PP P + PP P PP P P
Sbjct: 113 PQHGDHEASPPPPPPPRKSRAGGSSPPPPPPPRVPRTPPPRSPPPRRPPMTPPSP 167
>Z93393-1|CAB07688.1| 497|Caenorhabditis elegans Hypothetical
protein Y48E1B.1 protein.
Length = 497
Score = 32.3 bits (70), Expect = 0.50
Identities = 20/68 (29%), Positives = 23/68 (33%)
Frame = +3
Query: 669 PREGDPRRSXXAPPXPXQLXXRILXPPTP*XNIXFIXPPXXPXXPPPPPXXPXPXXXXXX 848
P + DP A P I+ PP P PP P PPPPP P
Sbjct: 329 PMKLDPSPQPAATPVEITEIPPIISPPAP-------PPPPPPPPPPPPPQTPSASSSVTF 381
Query: 849 XXXXLIDG 872
+DG
Sbjct: 382 SPTKSVDG 389
Score = 31.9 bits (69), Expect = 0.66
Identities = 17/42 (40%), Positives = 18/42 (42%)
Frame = +3
Query: 705 PPXPXQLXXRILXPPTP*XNIXFIXPPXXPXXPPPPPXXPXP 830
PP P +L TP I I P P PPPPP P P
Sbjct: 326 PPPPMKLDPSPQPAATP-VEITEIPPIISPPAPPPPPPPPPP 366
>AF535160-1|AAN33048.1| 468|Caenorhabditis elegans UNC-34 protein.
Length = 468
Score = 32.3 bits (70), Expect = 0.50
Identities = 18/42 (42%), Positives = 18/42 (42%), Gaps = 1/42 (2%)
Frame = +3
Query: 702 APPXPXQLXXRI-LXPPTP*XNIXFIXPPXXPXXPPPPPXXP 824
APP P L I PP P I I P PPPPP P
Sbjct: 200 APPPPVPLTSNIPQAPPAPPPPIGGIAPVNAHGAPPPPPLPP 241
Score = 28.3 bits (60), Expect = 8.1
Identities = 12/23 (52%), Positives = 13/23 (56%)
Frame = +1
Query: 745 PPPLX*IXXSYXPPXPPXXPPPP 813
PPPL + PP PP PPPP
Sbjct: 236 PPPLPPVGAGAPPPPPP--PPPP 256
>AC025722-6|AAO12398.1| 310|Caenorhabditis elegans Uncoordinated
protein 34, isoform b protein.
Length = 310
Score = 32.3 bits (70), Expect = 0.50
Identities = 18/42 (42%), Positives = 18/42 (42%), Gaps = 1/42 (2%)
Frame = +3
Query: 702 APPXPXQLXXRI-LXPPTP*XNIXFIXPPXXPXXPPPPPXXP 824
APP P L I PP P I I P PPPPP P
Sbjct: 186 APPPPVPLTSNIPQAPPAPPPPIGGIAPVNAHGAPPPPPLPP 227
Score = 28.3 bits (60), Expect = 8.1
Identities = 12/23 (52%), Positives = 13/23 (56%)
Frame = +1
Query: 745 PPPLX*IXXSYXPPXPPXXPPPP 813
PPPL + PP PP PPPP
Sbjct: 222 PPPLPPVGAGAPPPPPP--PPPP 242
>AC025722-5|AAO12397.1| 454|Caenorhabditis elegans Uncoordinated
protein 34, isoform a protein.
Length = 454
Score = 32.3 bits (70), Expect = 0.50
Identities = 18/42 (42%), Positives = 18/42 (42%), Gaps = 1/42 (2%)
Frame = +3
Query: 702 APPXPXQLXXRI-LXPPTP*XNIXFIXPPXXPXXPPPPPXXP 824
APP P L I PP P I I P PPPPP P
Sbjct: 186 APPPPVPLTSNIPQAPPAPPPPIGGIAPVNAHGAPPPPPLPP 227
Score = 28.3 bits (60), Expect = 8.1
Identities = 12/23 (52%), Positives = 13/23 (56%)
Frame = +1
Query: 745 PPPLX*IXXSYXPPXPPXXPPPP 813
PPPL + PP PP PPPP
Sbjct: 222 PPPLPPVGAGAPPPPPP--PPPP 242
>U10438-9|AAU87834.1| 616|Caenorhabditis elegans Hypothetical
protein B0280.13 protein.
Length = 616
Score = 31.9 bits (69), Expect = 0.66
Identities = 13/24 (54%), Positives = 13/24 (54%)
Frame = +1
Query: 745 PPPLX*IXXSYXPPXPPXXPPPPP 816
PPPL I P PP PPPPP
Sbjct: 499 PPPLPPIATPSSVPPPPPPPPPPP 522
Score = 31.1 bits (67), Expect = 1.1
Identities = 16/54 (29%), Positives = 19/54 (35%)
Frame = +3
Query: 669 PREGDPRRSXXAPPXPXQLXXRILXPPTP*XNIXFIXPPXXPXXPPPPPXXPXP 830
P+ P S P P + P P + I P PPPPP P P
Sbjct: 470 PKPAPPPPSRIPNPSPSPQPAEVSKSPPPPPPLPPIATPSSVPPPPPPPPPPPP 523
>AF098500-3|ABD94103.1| 774|Caenorhabditis elegans Temporarily
assigned gene nameprotein 343, isoform b protein.
Length = 774
Score = 31.9 bits (69), Expect = 0.66
Identities = 19/52 (36%), Positives = 19/52 (36%), Gaps = 1/52 (1%)
Frame = +3
Query: 678 GDPRRSXXAPPXPXQLXXRILXP-PTP*XNIXFIXPPXXPXXPPPPPXXPXP 830
G P S PP P L P P P I PP P PPP P P
Sbjct: 67 GRPTESPPLPPPPLPLSNPPAKPTPPPPPPKPTIRPPPIPASPPPRPPASEP 118
Score = 28.3 bits (60), Expect = 8.1
Identities = 13/26 (50%), Positives = 13/26 (50%)
Frame = +1
Query: 745 PPPLX*IXXSYXPPXPPXXPPPPPXP 822
PPPL PP P PPPPP P
Sbjct: 77 PPPLP----LSNPPAKPTPPPPPPKP 98
>AF098500-2|AAC67399.2| 996|Caenorhabditis elegans Temporarily
assigned gene nameprotein 343, isoform a protein.
Length = 996
Score = 31.9 bits (69), Expect = 0.66
Identities = 19/52 (36%), Positives = 19/52 (36%), Gaps = 1/52 (1%)
Frame = +3
Query: 678 GDPRRSXXAPPXPXQLXXRILXP-PTP*XNIXFIXPPXXPXXPPPPPXXPXP 830
G P S PP P L P P P I PP P PPP P P
Sbjct: 289 GRPTESPPLPPPPLPLSNPPAKPTPPPPPPKPTIRPPPIPASPPPRPPASEP 340
Score = 28.3 bits (60), Expect = 8.1
Identities = 13/26 (50%), Positives = 13/26 (50%)
Frame = +1
Query: 745 PPPLX*IXXSYXPPXPPXXPPPPPXP 822
PPPL PP P PPPPP P
Sbjct: 299 PPPLP----LSNPPAKPTPPPPPPKP 320
>U41543-12|AAZ91345.1| 401|Caenorhabditis elegans Groundhog
(hedgehog-like family)protein 7 protein.
Length = 401
Score = 31.5 bits (68), Expect = 0.87
Identities = 13/26 (50%), Positives = 14/26 (53%)
Frame = +1
Query: 745 PPPLX*IXXSYXPPXPPXXPPPPPXP 822
PPP + PP PP PPPPP P
Sbjct: 134 PPP----PPPHYPPPPPHYPPPPPAP 155
Score = 30.7 bits (66), Expect = 1.5
Identities = 17/50 (34%), Positives = 20/50 (40%), Gaps = 1/50 (2%)
Frame = +3
Query: 684 PRRSXXAP-PXPXQLXXRILXPPTP*XNIXFIXPPXXPXXPPPPPXXPXP 830
P+ + AP P P + P P PP P PPPPP P P
Sbjct: 103 PQHAVPAPAPPPAPYPQHAVPAPAPYQQQP-PPPPPPPHYPPPPPHYPPP 151
>AF106580-3|AAC78205.1| 881|Caenorhabditis elegans Temporarily
assigned gene nameprotein 268 protein.
Length = 881
Score = 31.5 bits (68), Expect = 0.87
Identities = 15/30 (50%), Positives = 15/30 (50%), Gaps = 4/30 (13%)
Frame = +1
Query: 745 PPPLX*IXXSYXPPXPPXXPP----PPPXP 822
PPPL I PP PP PP PPP P
Sbjct: 73 PPPLISILQQAPPPPPPPPPPTLKAPPPPP 102
>AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical
protein Y48G9A.4 protein.
Length = 1115
Score = 31.5 bits (68), Expect = 0.87
Identities = 15/52 (28%), Positives = 19/52 (36%)
Frame = +3
Query: 669 PREGDPRRSXXAPPXPXQLXXRILXPPTP*XNIXFIXPPXXPXXPPPPPXXP 824
P + R + PP P + PP P + P PPPPP P
Sbjct: 518 PHKEQRRSTSKDPPRPAPPPVSSIPPPPPIAGLLAANGTNVPIPPPPPPPLP 569
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 30.7 bits (66), Expect = 1.5
Identities = 12/26 (46%), Positives = 13/26 (50%)
Frame = +1
Query: 739 WXPPPLX*IXXSYXPPXPPXXPPPPP 816
W PPP + PP P PPPPP
Sbjct: 296 WPPPPPPPPGRTPGPPGMPGMPPPPP 321
>Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 30.7 bits (66), Expect = 1.5
Identities = 17/42 (40%), Positives = 18/42 (42%)
Frame = -1
Query: 829 GXGXXGGGGGXXGXXGGXMXXIFX*GVGGSNIRXXNCXGXGG 704
G G GGGGG G GG G GG + C G GG
Sbjct: 121 GGGCGGGGGGCGGGGGGGCGGGSSGGCGGGS--SGGCGGGGG 160
Score = 29.1 bits (62), Expect = 4.6
Identities = 14/30 (46%), Positives = 14/30 (46%)
Frame = -3
Query: 833 GXXXGXGGGGGXXGGXGGXYEXNIXLRGGG 744
G G GGGGG GG GG GGG
Sbjct: 85 GGGGGCGGGGGGCGGGGGCGGGGGGCGGGG 114
Score = 29.1 bits (62), Expect = 4.6
Identities = 14/30 (46%), Positives = 14/30 (46%)
Frame = -3
Query: 833 GXXXGXGGGGGXXGGXGGXYEXNIXLRGGG 744
G G GGGGG GG GG GGG
Sbjct: 92 GGGGGCGGGGGCGGGGGGCGGGGGGCGGGG 121
Score = 28.3 bits (60), Expect = 8.1
Identities = 13/26 (50%), Positives = 13/26 (50%)
Frame = -3
Query: 821 GXGGGGGXXGGXGGXYEXNIXLRGGG 744
G GGGGG GG GG GGG
Sbjct: 82 GCGGGGGGCGGGGGGCGGGGGCGGGG 107
Score = 28.3 bits (60), Expect = 8.1
Identities = 13/30 (43%), Positives = 14/30 (46%)
Frame = -3
Query: 833 GXXXGXGGGGGXXGGXGGXYEXNIXLRGGG 744
G G GGGGG GG G + GGG
Sbjct: 160 GGGCGGGGGGGCGGGSSGGGGYAVAPSGGG 189
>Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 30.7 bits (66), Expect = 1.5
Identities = 17/42 (40%), Positives = 18/42 (42%)
Frame = -1
Query: 829 GXGXXGGGGGXXGXXGGXMXXIFX*GVGGSNIRXXNCXGXGG 704
G G GGGGG G GG G GG + C G GG
Sbjct: 121 GGGCGGGGGGCGGGGGGGCGGGSSGGCGGGS--SGGCGGGGG 160
Score = 29.1 bits (62), Expect = 4.6
Identities = 14/30 (46%), Positives = 14/30 (46%)
Frame = -3
Query: 833 GXXXGXGGGGGXXGGXGGXYEXNIXLRGGG 744
G G GGGGG GG GG GGG
Sbjct: 85 GGGGGCGGGGGGCGGGGGCGGGGGGCGGGG 114
Score = 29.1 bits (62), Expect = 4.6
Identities = 14/30 (46%), Positives = 14/30 (46%)
Frame = -3
Query: 833 GXXXGXGGGGGXXGGXGGXYEXNIXLRGGG 744
G G GGGGG GG GG GGG
Sbjct: 92 GGGGGCGGGGGCGGGGGGCGGGGGGCGGGG 121
Score = 28.3 bits (60), Expect = 8.1
Identities = 13/26 (50%), Positives = 13/26 (50%)
Frame = -3
Query: 821 GXGGGGGXXGGXGGXYEXNIXLRGGG 744
G GGGGG GG GG GGG
Sbjct: 82 GCGGGGGGCGGGGGGCGGGGGCGGGG 107
Score = 28.3 bits (60), Expect = 8.1
Identities = 13/30 (43%), Positives = 14/30 (46%)
Frame = -3
Query: 833 GXXXGXGGGGGXXGGXGGXYEXNIXLRGGG 744
G G GGGGG GG G + GGG
Sbjct: 160 GGGCGGGGGGGCGGGSSGGGGYAVAPSGGG 189
>U50310-5|AAA92541.1| 318|Caenorhabditis elegans Ground-like (grd
related) protein 9 protein.
Length = 318
Score = 30.7 bits (66), Expect = 1.5
Identities = 10/14 (71%), Positives = 10/14 (71%)
Frame = +1
Query: 781 PPXPPXXPPPPPXP 822
PP PP PPPPP P
Sbjct: 134 PPPPPSPPPPPPPP 147
Score = 29.9 bits (64), Expect = 2.7
Identities = 13/42 (30%), Positives = 17/42 (40%)
Frame = +3
Query: 771 FIXPPXXPXXPPPPPXXPXPXXXXXXXXXXLIDGSIXLPTXI 896
+I P P PPPPP P P L D + P+ +
Sbjct: 130 YIEAPPPPPSPPPPPPPPPPQLQQQQVQLPLQDATTLRPSTL 171
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 30.7 bits (66), Expect = 1.5
Identities = 12/26 (46%), Positives = 13/26 (50%)
Frame = +1
Query: 739 WXPPPLX*IXXSYXPPXPPXXPPPPP 816
W PPP + PP P PPPPP
Sbjct: 306 WPPPPPPPPGRTPGPPGMPGMPPPPP 331
>U23515-9|AAP82644.1| 360|Caenorhabditis elegans Hypothetical
protein R144.4a protein.
Length = 360
Score = 30.7 bits (66), Expect = 1.5
Identities = 10/14 (71%), Positives = 10/14 (71%)
Frame = +1
Query: 781 PPXPPXXPPPPPXP 822
PP PP PPPPP P
Sbjct: 2 PPPPPPPPPPPPPP 15
Score = 30.7 bits (66), Expect = 1.5
Identities = 10/14 (71%), Positives = 10/14 (71%)
Frame = +1
Query: 781 PPXPPXXPPPPPXP 822
PP PP PPPPP P
Sbjct: 3 PPPPPPPPPPPPPP 16
Score = 30.7 bits (66), Expect = 1.5
Identities = 10/14 (71%), Positives = 10/14 (71%)
Frame = +1
Query: 781 PPXPPXXPPPPPXP 822
PP PP PPPPP P
Sbjct: 4 PPPPPPPPPPPPPP 17
>U23515-8|AAP82645.1| 362|Caenorhabditis elegans Hypothetical
protein R144.4b protein.
Length = 362
Score = 30.7 bits (66), Expect = 1.5
Identities = 10/14 (71%), Positives = 10/14 (71%)
Frame = +1
Query: 781 PPXPPXXPPPPPXP 822
PP PP PPPPP P
Sbjct: 2 PPPPPPPPPPPPPP 15
Score = 30.7 bits (66), Expect = 1.5
Identities = 10/14 (71%), Positives = 10/14 (71%)
Frame = +1
Query: 781 PPXPPXXPPPPPXP 822
PP PP PPPPP P
Sbjct: 3 PPPPPPPPPPPPPP 16
Score = 30.7 bits (66), Expect = 1.5
Identities = 10/14 (71%), Positives = 10/14 (71%)
Frame = +1
Query: 781 PPXPPXXPPPPPXP 822
PP PP PPPPP P
Sbjct: 4 PPPPPPPPPPPPPP 17
>L25598-4|AAV58888.1| 737|Caenorhabditis elegans Calpain family
protein 1, isoform b protein.
Length = 737
Score = 30.7 bits (66), Expect = 1.5
Identities = 14/26 (53%), Positives = 14/26 (53%)
Frame = -3
Query: 821 GXGGGGGXXGGXGGXYEXNIXLRGGG 744
G GGGGG GG GG N GGG
Sbjct: 52 GGGGGGGGGGGGGGFGGGNGGFGGGG 77
Score = 29.1 bits (62), Expect = 4.6
Identities = 15/31 (48%), Positives = 16/31 (51%), Gaps = 1/31 (3%)
Frame = -3
Query: 833 GXXXGXGGG-GGXXGGXGGXYEXNIXLRGGG 744
G G GGG GG GG GG Y +GGG
Sbjct: 61 GGGGGFGGGNGGFGGGGGGNYGGGGGNQGGG 91
>L25598-3|AAM15551.1| 759|Caenorhabditis elegans Calpain family
protein 1, isoform d protein.
Length = 759
Score = 30.7 bits (66), Expect = 1.5
Identities = 14/26 (53%), Positives = 14/26 (53%)
Frame = -3
Query: 821 GXGGGGGXXGGXGGXYEXNIXLRGGG 744
G GGGGG GG GG N GGG
Sbjct: 52 GGGGGGGGGGGGGGFGGGNGGFGGGG 77
Score = 28.3 bits (60), Expect = 8.1
Identities = 13/30 (43%), Positives = 14/30 (46%)
Frame = -3
Query: 833 GXXXGXGGGGGXXGGXGGXYEXNIXLRGGG 744
G G GGGGG GG G + GGG
Sbjct: 54 GGGGGGGGGGGGFGGGNGGFGGGGGGSGGG 83
>AF025467-2|AAN65301.1| 505|Caenorhabditis elegans Hypothetical
protein R148.5b protein.
Length = 505
Score = 29.9 bits (64), Expect = 2.7
Identities = 15/46 (32%), Positives = 17/46 (36%)
Frame = +3
Query: 678 GDPRRSXXAPPXPXQLXXRILXPPTP*XNIXFIXPPXXPXXPPPPP 815
G P PP P ++ PP F PP PPPPP
Sbjct: 269 GPPPHHPYGPPHPMHHPYAMMPPP-----FGFFPPPPRGHFPPPPP 309
>AF025467-1|AAB71039.2| 528|Caenorhabditis elegans Hypothetical
protein R148.5a protein.
Length = 528
Score = 29.9 bits (64), Expect = 2.7
Identities = 15/46 (32%), Positives = 17/46 (36%)
Frame = +3
Query: 678 GDPRRSXXAPPXPXQLXXRILXPPTP*XNIXFIXPPXXPXXPPPPP 815
G P PP P ++ PP F PP PPPPP
Sbjct: 269 GPPPHHPYGPPHPMHHPYAMMPPP-----FGFFPPPPRGHFPPPPP 309
>Z81135-1|CAB03453.1| 627|Caenorhabditis elegans Hypothetical
protein W01G7.1 protein.
Length = 627
Score = 29.5 bits (63), Expect = 3.5
Identities = 10/17 (58%), Positives = 10/17 (58%)
Frame = +3
Query: 780 PPXXPXXPPPPPXXPXP 830
PP P PPPPP P P
Sbjct: 512 PPLPPLPPPPPPPKPKP 528
>Z68008-5|CAD91696.1| 1160|Caenorhabditis elegans Hypothetical
protein R08B4.1b protein.
Length = 1160
Score = 29.5 bits (63), Expect = 3.5
Identities = 14/30 (46%), Positives = 15/30 (50%)
Frame = -3
Query: 833 GXXXGXGGGGGXXGGXGGXYEXNIXLRGGG 744
G G GGGGG GG GG + GGG
Sbjct: 796 GSGGGGGGGGGGSGGSGGGGSNSNSGGGGG 825
Score = 29.1 bits (62), Expect = 4.6
Identities = 20/57 (35%), Positives = 22/57 (38%)
Frame = -1
Query: 874 DPSIKXXXXXXXGXXGXGXXGGGGGXXGXXGGXMXXIFX*GVGGSNIRXXNCXGXGG 704
DP++ G G G G GGG G GG G GGSN G GG
Sbjct: 776 DPTLGGPTGSSGGGGGGGNGGSGGGGGGGGGGSGGS----GGGGSNSNSGGGGGNGG 828
>L25598-2|AAV58887.1| 780|Caenorhabditis elegans Calpain family
protein 1, isoform a protein.
Length = 780
Score = 29.5 bits (63), Expect = 3.5
Identities = 15/29 (51%), Positives = 15/29 (51%)
Frame = -3
Query: 821 GXGGGGGXXGGXGGXYEXNIXLRGGGXQY 735
G GGGGG GG GG N GGG Y
Sbjct: 52 GGGGGGGGGGGGGGFGGGNGGF-GGGSNY 79
>D10877-1|BAA01645.1| 346|Caenorhabditis elegans hnRNP like protein
protein.
Length = 346
Score = 29.5 bits (63), Expect = 3.5
Identities = 13/26 (50%), Positives = 14/26 (53%)
Frame = -3
Query: 815 GGGGGXXGGXGGXYEXNIXLRGGGXQ 738
G GGG GG GG Y +GGG Q
Sbjct: 243 GPGGGGQGGYGGDYGGGWGQQGGGGQ 268
>AY438643-1|AAR00670.1| 627|Caenorhabditis elegans abnormal DAuer
Formation DAF-5,a Ski oncogene homolog involved in a
neuronal TGF betapathway (71.0 kD) (daf-5) protein.
Length = 627
Score = 29.5 bits (63), Expect = 3.5
Identities = 10/17 (58%), Positives = 10/17 (58%)
Frame = +3
Query: 780 PPXXPXXPPPPPXXPXP 830
PP P PPPPP P P
Sbjct: 512 PPLPPLPPPPPPPKPKP 528
>AL023835-10|CAA19494.2| 691|Caenorhabditis elegans Hypothetical
protein Y37A1B.11 protein.
Length = 691
Score = 29.5 bits (63), Expect = 3.5
Identities = 19/52 (36%), Positives = 20/52 (38%)
Frame = +3
Query: 675 EGDPRRSXXAPPXPXQLXXRILXPPTP*XNIXFIXPPXXPXXPPPPPXXPXP 830
E P R PP P + R PTP P P PPPPP P P
Sbjct: 539 EPSPVREPTPPPPPREPTPR---EPTPEPE-----PVREPTPPPPPPAKPRP 582
>AF101316-1|AAC69231.1| 684|Caenorhabditis elegans Hypothetical
protein F52F10.3 protein.
Length = 684
Score = 29.5 bits (63), Expect = 3.5
Identities = 14/37 (37%), Positives = 16/37 (43%), Gaps = 2/37 (5%)
Frame = -2
Query: 753 GWGXPI--FXGSTAXGXGGPXXIFWDHPPWVXLXRXS 649
GWG + G+ G GGP F HP W R S
Sbjct: 543 GWGVFVCWVVGANHMGWGGPIDTFMSHPIWQPFGRLS 579
>AF043706-2|AAB97604.2| 730|Caenorhabditis elegans Hypothetical
protein ZC123.1 protein.
Length = 730
Score = 29.5 bits (63), Expect = 3.5
Identities = 10/17 (58%), Positives = 10/17 (58%)
Frame = +3
Query: 780 PPXXPXXPPPPPXXPXP 830
PP P PPPPP P P
Sbjct: 134 PPPTPAAPPPPPPPPPP 150
Score = 28.7 bits (61), Expect = 6.1
Identities = 19/50 (38%), Positives = 21/50 (42%)
Frame = +3
Query: 675 EGDPRRSXXAPPXPXQLXXRILXPPTP*XNIXFIXPPXXPXXPPPPPXXP 824
EG+P APP P + PPTP PP P PPP P P
Sbjct: 116 EGNPG-GVPAPPNPPRTCC---PPPTP------AAPPPPPPPPPPAPEAP 155
>AF038613-7|ABB51185.1| 308|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform c protein.
Length = 308
Score = 29.5 bits (63), Expect = 3.5
Identities = 13/26 (50%), Positives = 14/26 (53%)
Frame = -3
Query: 815 GGGGGXXGGXGGXYEXNIXLRGGGXQ 738
G GGG GG GG Y +GGG Q
Sbjct: 205 GPGGGGQGGYGGDYGGGWGQQGGGGQ 230
>AF038613-5|AAB92051.1| 346|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform a protein.
Length = 346
Score = 29.5 bits (63), Expect = 3.5
Identities = 13/26 (50%), Positives = 14/26 (53%)
Frame = -3
Query: 815 GGGGGXXGGXGGXYEXNIXLRGGGXQ 738
G GGG GG GG Y +GGG Q
Sbjct: 243 GPGGGGQGGYGGDYGGGWGQQGGGGQ 268
>Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical
protein E02A10.2 protein.
Length = 385
Score = 29.1 bits (62), Expect = 4.6
Identities = 14/30 (46%), Positives = 14/30 (46%)
Frame = -3
Query: 833 GXXXGXGGGGGXXGGXGGXYEXNIXLRGGG 744
G G GGGGG GG GG GGG
Sbjct: 67 GGGGGCGGGGGGCGGGGGCGGGGGGCGGGG 96
Score = 29.1 bits (62), Expect = 4.6
Identities = 14/30 (46%), Positives = 14/30 (46%)
Frame = -3
Query: 833 GXXXGXGGGGGXXGGXGGXYEXNIXLRGGG 744
G G GGGGG GG GG GGG
Sbjct: 74 GGGGGCGGGGGCGGGGGGCGGGGGGCGGGG 103
Score = 29.1 bits (62), Expect = 4.6
Identities = 14/30 (46%), Positives = 14/30 (46%)
Frame = -3
Query: 833 GXXXGXGGGGGXXGGXGGXYEXNIXLRGGG 744
G G GGGGG GG GG GGG
Sbjct: 138 GGGCGGGGGGGCGGGGGGCGGGGGGCGGGG 167
Score = 28.3 bits (60), Expect = 8.1
Identities = 13/26 (50%), Positives = 13/26 (50%)
Frame = -3
Query: 821 GXGGGGGXXGGXGGXYEXNIXLRGGG 744
G GGGGG GG GG GGG
Sbjct: 64 GCGGGGGGCGGGGGGCGGGGGCGGGG 89
>AF067607-3|AAF98607.1| 590|Caenorhabditis elegans Hypothetical
protein C18H7.6 protein.
Length = 590
Score = 29.1 bits (62), Expect = 4.6
Identities = 15/32 (46%), Positives = 16/32 (50%)
Frame = -3
Query: 833 GXXXGXGGGGGXXGGXGGXYEXNIXLRGGGXQ 738
G G GGGGG GG GG + GGG Q
Sbjct: 7 GSLKGIGGGGGA-GGLGGGHGGGHGQAGGGGQ 37
>AF000193-3|AAB52890.1| 259|Caenorhabditis elegans Hypothetical
protein T20B6.3 protein.
Length = 259
Score = 29.1 bits (62), Expect = 4.6
Identities = 14/30 (46%), Positives = 14/30 (46%)
Frame = -3
Query: 833 GXXXGXGGGGGXXGGXGGXYEXNIXLRGGG 744
G G GGGGG GG GG GGG
Sbjct: 150 GGYGGGGGGGGDFGGYGGGGMGGGGYGGGG 179
>AC024777-5|AAF60564.1| 506|Caenorhabditis elegans Hypothetical
protein Y42H9AR.1 protein.
Length = 506
Score = 29.1 bits (62), Expect = 4.6
Identities = 14/41 (34%), Positives = 16/41 (39%)
Frame = +3
Query: 708 PXPXQLXXRILXPPTP*XNIXFIXPPXXPXXPPPPPXXPXP 830
P P Q + PP P I + PP P P PP P
Sbjct: 244 PDPSQFSSTVPLPPAPSSLIQNLPPPPQPAFLPQPPTSYAP 284
>Z81560-2|CAB04547.1| 1021|Caenorhabditis elegans Hypothetical
protein K02E2.2 protein.
Length = 1021
Score = 28.7 bits (61), Expect = 6.1
Identities = 12/24 (50%), Positives = 13/24 (54%)
Frame = +1
Query: 745 PPPLX*IXXSYXPPXPPXXPPPPP 816
PPP + PP PP PPPPP
Sbjct: 777 PPPFFALPV---PPPPPVPPPPPP 797
>AF101316-2|AAC69230.1| 692|Caenorhabditis elegans Hypothetical
protein F52F10.4 protein.
Length = 692
Score = 28.7 bits (61), Expect = 6.1
Identities = 14/37 (37%), Positives = 16/37 (43%), Gaps = 2/37 (5%)
Frame = -2
Query: 753 GWGXPI--FXGSTAXGXGGPXXIFWDHPPWVXLXRXS 649
GWG + G+ G GGP F HP W R S
Sbjct: 549 GWGVFVCWVVGANHMGWGGPIDKFMSHPIWQPFGRLS 585
>AC024790-13|AAL32247.1| 311|Caenorhabditis elegans Hypothetical
protein Y47D7A.13 protein.
Length = 311
Score = 28.7 bits (61), Expect = 6.1
Identities = 12/24 (50%), Positives = 14/24 (58%)
Frame = -3
Query: 815 GGGGGXXGGXGGXYEXNIXLRGGG 744
GGG G GG GG Y+ + GGG
Sbjct: 67 GGGYGGAGGFGGAYQAAPAIGGGG 90
>Z50875-1|CAA90776.1| 1872|Caenorhabditis elegans Hypothetical
protein T08A11.1 protein.
Length = 1872
Score = 28.3 bits (60), Expect = 8.1
Identities = 9/12 (75%), Positives = 9/12 (75%)
Frame = +1
Query: 781 PPXPPXXPPPPP 816
PP PP PPPPP
Sbjct: 817 PPPPPPLPPPPP 828
>U97005-10|AAK72084.1| 646|Caenorhabditis elegans Hypothetical
protein F19F10.12 protein.
Length = 646
Score = 28.3 bits (60), Expect = 8.1
Identities = 12/26 (46%), Positives = 16/26 (61%)
Frame = -3
Query: 227 YELLGVVFDVLKKSGASRRTIAPLGP 150
Y L+ + DVLKK G+ I P+GP
Sbjct: 270 YSLIKTITDVLKKHGSVLLPICPVGP 295
>U64857-2|AAC25867.1| 1558|Caenorhabditis elegans Hypothetical protein
C37C3.6a protein.
Length = 1558
Score = 28.3 bits (60), Expect = 8.1
Identities = 12/26 (46%), Positives = 16/26 (61%)
Frame = -2
Query: 93 TECGGXANRTANTEECVKILRIPYSE 16
T CGG ANR A+ ++C + P SE
Sbjct: 1406 TGCGGNANRFASKDQCESLCVKPASE 1431
>U64857-1|AAC25868.1| 2167|Caenorhabditis elegans Hypothetical protein
C37C3.6b protein.
Length = 2167
Score = 28.3 bits (60), Expect = 8.1
Identities = 12/26 (46%), Positives = 16/26 (61%)
Frame = -2
Query: 93 TECGGXANRTANTEECVKILRIPYSE 16
T CGG ANR A+ ++C + P SE
Sbjct: 1406 TGCGGNANRFASKDQCESLCVKPASE 1431
>AL021180-3|CAA15982.1| 1872|Caenorhabditis elegans Hypothetical
protein T08A11.1 protein.
Length = 1872
Score = 28.3 bits (60), Expect = 8.1
Identities = 9/12 (75%), Positives = 9/12 (75%)
Frame = +1
Query: 781 PPXPPXXPPPPP 816
PP PP PPPPP
Sbjct: 817 PPPPPPLPPPPP 828
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,685,895
Number of Sequences: 27780
Number of extensions: 352983
Number of successful extensions: 3455
Number of sequences better than 10.0: 46
Number of HSP's better than 10.0 without gapping: 1177
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2352
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2339274014
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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