Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP16_F_P13
(892 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 36 0.006
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 31 0.29
SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit Spp42|Schizosac... 31 0.29
SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr 2|||M... 30 0.38
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 29 0.89
SPAC1F5.04c |cdc12||formin Cdc12|Schizosaccharomyces pombe|chr 1... 26 1.2
SPCC306.09c |cap1|cap|adenylyl cyclase-associated protein Cap1|S... 25 1.7
SPBC317.01 |mbx2|pvg4|MADS-box transcription factor Pvg4|Schizos... 28 2.1
SPAC19G12.10c |cpy1|pcy1|vacuolar carboxypeptidase Y|Schizosacch... 27 3.6
SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family ... 27 3.6
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 27 3.6
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 36.3 bits (80), Expect = 0.006
Identities = 19/52 (36%), Positives = 20/52 (38%), Gaps = 3/52 (5%)
Frame = +1
Query: 541 KXPPPXXPAGXFXSNKXXP---PPKKXXPXXXPQHXPPPXXXGPNTXPPPPP 687
K PPP PA + P PP P PPP G PPPPP
Sbjct: 730 KSPPPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPP 781
Score = 28.7 bits (61), Expect = 1.2
Identities = 14/30 (46%), Positives = 14/30 (46%)
Frame = +2
Query: 470 PXSGGPXSXYPPPXPPXXVXFFXKKXPPPP 559
P GGP PPP PP V PPPP
Sbjct: 756 PIMGGP----PPPPPPPGVAGAGPPPPPPP 781
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 30.7 bits (66), Expect = 0.29
Identities = 14/45 (31%), Positives = 15/45 (33%)
Frame = +1
Query: 550 PPXXPAGXFXSNKXXPPPKKXXPXXXPQHXPPPXXXGPNTXPPPP 684
PP P P P P PP GP + PPPP
Sbjct: 1690 PPVRPQSAAPPQMSAPTPPPPPMSVPPPPSAPPMPAGPPSAPPPP 1734
Score = 25.8 bits (54), Expect = 8.3
Identities = 9/16 (56%), Positives = 10/16 (62%)
Frame = +2
Query: 641 PPPXXGXPTXPPPPPP 688
PP G P+ PPPP P
Sbjct: 1721 PPMPAGPPSAPPPPLP 1736
>SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit
Spp42|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2363
Score = 30.7 bits (66), Expect = 0.29
Identities = 10/19 (52%), Positives = 12/19 (63%)
Frame = +2
Query: 641 PPPXXGXPTXPPPPPPXXF 697
PPP P+ PPPPPP +
Sbjct: 14 PPPGFEPPSQPPPPPPPGY 32
Score = 29.5 bits (63), Expect = 0.67
Identities = 11/24 (45%), Positives = 12/24 (50%)
Frame = +1
Query: 616 PXXXPQHXPPPXXXGPNTXPPPPP 687
P P PPP P + PPPPP
Sbjct: 5 PPGNPPPPPPPPGFEPPSQPPPPP 28
Score = 25.8 bits (54), Expect = 8.3
Identities = 8/10 (80%), Positives = 8/10 (80%)
Frame = +2
Query: 863 PXXPPPPPPP 892
P PPPPPPP
Sbjct: 6 PGNPPPPPPP 15
Score = 25.8 bits (54), Expect = 8.3
Identities = 13/44 (29%), Positives = 14/44 (31%)
Frame = +2
Query: 503 PPXPPXXVXFFXKKXPPPPXRRGXFXXTNXXPPQKKXXLXXXXN 634
PP PP F PPPP G P + L N
Sbjct: 9 PPPPPPPPGFEPPSQPPPPPPPGYVKKRKNKTPAQSGNLEKQLN 52
Score = 25.8 bits (54), Expect = 8.3
Identities = 8/10 (80%), Positives = 8/10 (80%)
Frame = +2
Query: 863 PXXPPPPPPP 892
P PPPPPPP
Sbjct: 21 PSQPPPPPPP 30
>SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 309
Score = 30.3 bits (65), Expect = 0.38
Identities = 16/53 (30%), Positives = 17/53 (32%)
Frame = +1
Query: 547 PPPXXPAGXFXSNKXXPPPKKXXPXXXPQHXPPPXXXGPNTXPPPPPXXFFXP 705
PPP PA S P P P+ PPP P P F P
Sbjct: 172 PPPAQPAAPVKSPPSAPSLPSAVPPMPPKVPPPPLSQAPVANTSSRPSSFAPP 224
Score = 25.8 bits (54), Expect = 8.3
Identities = 21/77 (27%), Positives = 26/77 (33%), Gaps = 2/77 (2%)
Frame = +2
Query: 464 KXPXSGGPXSXYPPPXPPXXVXFFXKKXPPPPXRRGXFXXTNXXPPQKKXXLXXXXNTXP 643
+ P S P PPP P K PP P ++ PP + + P
Sbjct: 138 RPPTSAPPRPSIPPPSPASAPP-IPSKAPPIP--------SSLPPPAQPAAPVKSPPSAP 188
Query: 644 PPXXGXPTXPP--PPPP 688
P PP PPPP
Sbjct: 189 SLPSAVPPMPPKVPPPP 205
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 29.1 bits (62), Expect = 0.89
Identities = 17/49 (34%), Positives = 20/49 (40%), Gaps = 2/49 (4%)
Frame = +1
Query: 547 PPPXX--PAGXFXSNKXXPPPKKXXPXXXPQHXPPPXXXGPNTXPPPPP 687
PPP A +NK PPP P + PP N+ PPPP
Sbjct: 293 PPPSSRVSAAALAANKKRPPPPPP-PSRRNRGKPPIGNGSSNSSLPPPP 340
Score = 28.7 bits (61), Expect = 1.2
Identities = 15/47 (31%), Positives = 18/47 (38%)
Frame = +1
Query: 547 PPPXXPAGXFXSNKXXPPPKKXXPXXXPQHXPPPXXXGPNTXPPPPP 687
PPP P + PP + P PPP P+T PPP
Sbjct: 338 PPPPPPRSNAAGSIPLPPQGRSAP------PPPPPRSAPSTGRQPPP 378
Score = 27.9 bits (59), Expect = 2.1
Identities = 15/42 (35%), Positives = 16/42 (38%)
Frame = +1
Query: 562 PAGXFXSNKXXPPPKKXXPXXXPQHXPPPXXXGPNTXPPPPP 687
P G SN PPP P P G + PPPPP
Sbjct: 326 PIGNGSSNSSLPPPPPPPRSNAAGSIPLP-PQGRSAPPPPPP 366
Score = 27.5 bits (58), Expect = 2.7
Identities = 19/69 (27%), Positives = 23/69 (33%), Gaps = 6/69 (8%)
Frame = +2
Query: 500 PPPXPPXXVXFFXKKXPPPPXRRGXFXXTNXXP--PQKKXX----LXXXXNTXPPPXXGX 661
PPP PP ++ PP R P P + L T PP
Sbjct: 361 PPPPPPRSAPSTGRQPPPLSSSRAVSNPPAPPPAIPGRSAPALPPLGNASRTSTPPVPTP 420
Query: 662 PTXPPPPPP 688
P+ PP PP
Sbjct: 421 PSLPPSAPP 429
Score = 26.2 bits (55), Expect = 6.3
Identities = 21/77 (27%), Positives = 23/77 (29%), Gaps = 2/77 (2%)
Frame = +2
Query: 464 KXPXSGGPXSXYPPPXPPXXVXFFXKKXPPPPXRRGXFXXTNXXPPQKKXXLXXXXNTXP 643
K P G + PP PP P PP R PP P
Sbjct: 324 KPPIGNGSSNSSLPPPPPPPRSNAAGSIPLPPQGRS-------APPPPPPRSAPSTGRQP 376
Query: 644 PPXXG--XPTXPPPPPP 688
PP + PP PPP
Sbjct: 377 PPLSSSRAVSNPPAPPP 393
>SPAC1F5.04c |cdc12||formin Cdc12|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1841
Score = 25.8 bits (54), Expect = 8.3
Identities = 8/10 (80%), Positives = 8/10 (80%)
Frame = +2
Query: 863 PXXPPPPPPP 892
P PPPPPPP
Sbjct: 942 PAFPPPPPPP 951
Score = 23.4 bits (48), Expect(2) = 1.2
Identities = 9/17 (52%), Positives = 9/17 (52%)
Frame = +2
Query: 635 TXPPPXXGXPTXPPPPP 685
T P PT PPPPP
Sbjct: 896 TSLPTIITHPTPPPPPP 912
Score = 23.4 bits (48), Expect(2) = 1.2
Identities = 7/9 (77%), Positives = 7/9 (77%)
Frame = +2
Query: 662 PTXPPPPPP 688
P PPPPPP
Sbjct: 942 PAFPPPPPP 950
>SPCC306.09c |cap1|cap|adenylyl cyclase-associated protein
Cap1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 551
Score = 25.0 bits (52), Expect(2) = 1.7
Identities = 8/11 (72%), Positives = 8/11 (72%)
Frame = +2
Query: 656 GXPTXPPPPPP 688
G P PPPPPP
Sbjct: 304 GLPPPPPPPPP 314
Score = 21.4 bits (43), Expect(2) = 1.7
Identities = 7/12 (58%), Positives = 7/12 (58%)
Frame = +2
Query: 662 PTXPPPPPPXXF 697
P PPPPP F
Sbjct: 307 PPPPPPPPSNDF 318
>SPBC317.01 |mbx2|pvg4|MADS-box transcription factor
Pvg4|Schizosaccharomyces pombe|chr 2|||Manual
Length = 372
Score = 27.9 bits (59), Expect = 2.1
Identities = 11/29 (37%), Positives = 12/29 (41%)
Frame = +1
Query: 595 PPPKKXXPXXXPQHXPPPXXXGPNTXPPP 681
PP + P P H PP N PPP
Sbjct: 164 PPTQHHHPHTRPPHHPPHPHFHNNNYPPP 192
>SPAC19G12.10c |cpy1|pcy1|vacuolar carboxypeptidase
Y|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1002
Score = 27.1 bits (57), Expect = 3.6
Identities = 16/47 (34%), Positives = 16/47 (34%)
Frame = +1
Query: 547 PPPXXPAGXFXSNKXXPPPKKXXPXXXPQHXPPPXXXGPNTXPPPPP 687
PPP P PPP P PPP P PPPP
Sbjct: 208 PPP--PMHHKPGEHMPPPPMHHEPGE--HMPPPPMHHEPGEHMPPPP 250
Score = 27.1 bits (57), Expect = 3.6
Identities = 16/47 (34%), Positives = 16/47 (34%)
Frame = +1
Query: 547 PPPXXPAGXFXSNKXXPPPKKXXPXXXPQHXPPPXXXGPNTXPPPPP 687
PPP P PPP P PPP P PPPP
Sbjct: 221 PPP--PMHHEPGEHMPPPPMHHEPGE--HMPPPPMHHEPGEHMPPPP 263
Score = 27.1 bits (57), Expect = 3.6
Identities = 16/47 (34%), Positives = 16/47 (34%)
Frame = +1
Query: 547 PPPXXPAGXFXSNKXXPPPKKXXPXXXPQHXPPPXXXGPNTXPPPPP 687
PPP P PPP P PPP P PPPP
Sbjct: 234 PPP--PMHHEPGEHMPPPPMHHEPGE--HMPPPPMHHEPGEHMPPPP 276
Score = 27.1 bits (57), Expect = 3.6
Identities = 16/47 (34%), Positives = 16/47 (34%)
Frame = +1
Query: 547 PPPXXPAGXFXSNKXXPPPKKXXPXXXPQHXPPPXXXGPNTXPPPPP 687
PPP P PPP P PPP P PPPP
Sbjct: 247 PPP--PMHHEPGEHMPPPPMHHEPGE--HMPPPPMHHEPGEHMPPPP 289
Score = 27.1 bits (57), Expect = 3.6
Identities = 16/47 (34%), Positives = 16/47 (34%)
Frame = +1
Query: 547 PPPXXPAGXFXSNKXXPPPKKXXPXXXPQHXPPPXXXGPNTXPPPPP 687
PPP P PPP P PPP P PPPP
Sbjct: 260 PPP--PMHHEPGEHMPPPPMHHEPGE--HMPPPPMHHEPGEHMPPPP 302
Score = 27.1 bits (57), Expect = 3.6
Identities = 16/47 (34%), Positives = 16/47 (34%)
Frame = +1
Query: 547 PPPXXPAGXFXSNKXXPPPKKXXPXXXPQHXPPPXXXGPNTXPPPPP 687
PPP P PPP P PPP P PPPP
Sbjct: 273 PPP--PMHHEPGEHMPPPPMHHEPGE--HMPPPPMHHEPGEHMPPPP 315
Score = 27.1 bits (57), Expect = 3.6
Identities = 16/47 (34%), Positives = 16/47 (34%)
Frame = +1
Query: 547 PPPXXPAGXFXSNKXXPPPKKXXPXXXPQHXPPPXXXGPNTXPPPPP 687
PPP P PPP P PPP P PPPP
Sbjct: 286 PPP--PMHHEPGEHMPPPPMHHEPGE--HMPPPPMHHEPGEHMPPPP 328
Score = 27.1 bits (57), Expect = 3.6
Identities = 16/47 (34%), Positives = 16/47 (34%)
Frame = +1
Query: 547 PPPXXPAGXFXSNKXXPPPKKXXPXXXPQHXPPPXXXGPNTXPPPPP 687
PPP P PPP P PPP P PPPP
Sbjct: 299 PPP--PMHHEPGEHMPPPPMHHEPGE--HMPPPPMHHEPGEHMPPPP 341
Score = 25.8 bits (54), Expect = 8.3
Identities = 14/42 (33%), Positives = 14/42 (33%)
Frame = +1
Query: 562 PAGXFXSNKXXPPPKKXXPXXXPQHXPPPXXXGPNTXPPPPP 687
PA PPP P PPP P PPPP
Sbjct: 198 PAHHEPGEHMPPPPMHHKPGE--HMPPPPMHHEPGEHMPPPP 237
>SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1420
Score = 27.1 bits (57), Expect = 3.6
Identities = 13/46 (28%), Positives = 16/46 (34%)
Frame = +2
Query: 548 PPPPXRRGXFXXTNXXPPQKKXXLXXXXNTXPPPXXGXPTXPPPPP 685
PPPP T+ P + PP P+ PP PP
Sbjct: 241 PPPPTLPPQSTNTSQLPMPSRNVNNLGSQVNIPPPPATPSQPPRPP 286
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 27.1 bits (57), Expect = 3.6
Identities = 16/46 (34%), Positives = 18/46 (39%)
Frame = +1
Query: 547 PPPXXPAGXFXSNKXXPPPKKXXPXXXPQHXPPPXXXGPNTXPPPP 684
PP PA PPP + P P PP P+T PP P
Sbjct: 1179 PPVPKPAAGVPP---VPPPSEAPPVPKPSVGVPPVPP-PSTAPPVP 1220
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,284,825
Number of Sequences: 5004
Number of extensions: 37942
Number of successful extensions: 332
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 72
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 203
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 448490560
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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