Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP16_F_P13
         (892 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.              24   1.6  
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr...    24   2.1  
X72577-1|CAA51169.1|  283|Apis mellifera Apidaecin precursor pro...    23   4.9  
X72576-1|CAA51168.1|  144|Apis mellifera Apidaecin precursor pro...    23   4.9  
X72575-1|CAA51167.1|  168|Apis mellifera Apidaecin precursor pro...    23   4.9  
DQ667187-1|ABG75739.1|  428|Apis mellifera histamine-gated chlor...    23   4.9  

>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
          Length = 1946

 Score = 24.2 bits (50), Expect = 1.6
 Identities = 8/13 (61%), Positives = 8/13 (61%)
 Frame = +2

Query: 647  PXXGXPTXPPPPP 685
            P  G P  PPPPP
Sbjct: 1852 PVSGSPEPPPPPP 1864


>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
            protein.
          Length = 1370

 Score = 23.8 bits (49), Expect = 2.1
 Identities = 7/7 (100%), Positives = 7/7 (100%)
 Frame = +2

Query: 872  PPPPPPP 892
            PPPPPPP
Sbjct: 1355 PPPPPPP 1361



 Score = 23.8 bits (49), Expect = 2.1
 Identities = 7/7 (100%), Positives = 7/7 (100%)
 Frame = +2

Query: 872  PPPPPPP 892
            PPPPPPP
Sbjct: 1356 PPPPPPP 1362


>X72577-1|CAA51169.1|  283|Apis mellifera Apidaecin precursor
           protein.
          Length = 283

 Score = 22.6 bits (46), Expect = 4.9
 Identities = 11/38 (28%), Positives = 12/38 (31%)
 Frame = +2

Query: 575 FXXTNXXPPQKKXXLXXXXNTXPPPXXGXPTXPPPPPP 688
           F  TN  PP +   L         P    P   P P P
Sbjct: 17  FGNTNLDPPTRPTRLRREAKPEAEPGNNRPVYIPQPRP 54


>X72576-1|CAA51168.1|  144|Apis mellifera Apidaecin precursor
           protein.
          Length = 144

 Score = 22.6 bits (46), Expect = 4.9
 Identities = 11/38 (28%), Positives = 12/38 (31%)
 Frame = +2

Query: 575 FXXTNXXPPQKKXXLXXXXNTXPPPXXGXPTXPPPPPP 688
           F  TN  PP +   L         P    P   P P P
Sbjct: 18  FGNTNLDPPTRPTRLRREAEPEAEPGNNRPVYIPQPRP 55


>X72575-1|CAA51167.1|  168|Apis mellifera Apidaecin precursor
           protein.
          Length = 168

 Score = 22.6 bits (46), Expect = 4.9
 Identities = 13/46 (28%), Positives = 13/46 (28%)
 Frame = +1

Query: 550 PPXXPAGXFXSNKXXPPPKKXXPXXXPQHXPPPXXXGPNTXPPPPP 687
           PP  PA      K    P    P   PQ  PP         P   P
Sbjct: 25  PPTRPARLRREAKPEAEPGNNRPIYIPQPRPPHPRLRREAEPKAEP 70



 Score = 22.2 bits (45), Expect = 6.5
 Identities = 11/38 (28%), Positives = 12/38 (31%)
 Frame = +2

Query: 575 FXXTNXXPPQKKXXLXXXXNTXPPPXXGXPTXPPPPPP 688
           F  TN  PP +   L         P    P   P P P
Sbjct: 18  FGNTNLDPPTRPARLRREAKPEAEPGNNRPIYIPQPRP 55


>DQ667187-1|ABG75739.1|  428|Apis mellifera histamine-gated chloride
           channel protein.
          Length = 428

 Score = 22.6 bits (46), Expect = 4.9
 Identities = 7/10 (70%), Positives = 7/10 (70%)
 Frame = +2

Query: 863 PXXPPPPPPP 892
           P  P PPPPP
Sbjct: 338 PPKPAPPPPP 347



 Score = 22.6 bits (46), Expect = 4.9
 Identities = 7/10 (70%), Positives = 7/10 (70%)
 Frame = +2

Query: 863 PXXPPPPPPP 892
           P   PPPPPP
Sbjct: 339 PKPAPPPPPP 348


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 202,132
Number of Sequences: 438
Number of extensions: 6092
Number of successful extensions: 23
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 28783482
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)