Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP16_F_P11
(937 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF025467-10|AAB71040.2| 154|Caenorhabditis elegans He1 homologu... 47 2e-05
Z54238-1|CAA90992.2| 281|Caenorhabditis elegans Hypothetical pr... 36 0.055
AL117204-23|CAB55137.1| 285|Caenorhabditis elegans Hypothetical... 36 0.055
U58755-7|AAB00696.1| 136|Caenorhabditis elegans Hypothetical pr... 34 0.17
AL032637-18|CAE17998.1| 193|Caenorhabditis elegans Hypothetical... 33 0.22
AF045646-2|AAK29827.1| 371|Caenorhabditis elegans Collagen prot... 33 0.29
Z83219-3|CAD57687.1| 965|Caenorhabditis elegans Hypothetical pr... 33 0.39
U10438-9|AAU87834.1| 616|Caenorhabditis elegans Hypothetical pr... 33 0.39
Z68008-5|CAD91696.1| 1160|Caenorhabditis elegans Hypothetical pr... 31 0.90
L25598-4|AAV58888.1| 737|Caenorhabditis elegans Calpain family ... 31 0.90
Z81555-7|CAB04518.1| 561|Caenorhabditis elegans Hypothetical pr... 31 1.2
U41543-12|AAZ91345.1| 401|Caenorhabditis elegans Groundhog (hed... 31 1.2
AF000198-8|AAP68908.1| 435|Caenorhabditis elegans Collagen prot... 31 1.2
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 31 1.6
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 31 1.6
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 31 1.6
Z78413-7|CAB01657.1| 352|Caenorhabditis elegans Hypothetical pr... 30 2.1
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 30 2.1
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 30 2.1
U80023-1|AAG24037.1| 180|Caenorhabditis elegans Hypothetical pr... 30 2.7
AL023858-2|CAE18058.1| 158|Caenorhabditis elegans Hypothetical ... 30 2.7
AF000193-3|AAB52890.1| 259|Caenorhabditis elegans Hypothetical ... 30 2.7
AC024859-14|AAY43989.1| 643|Caenorhabditis elegans Hypothetical... 30 2.7
Z79756-9|CAK12562.1| 830|Caenorhabditis elegans Hypothetical pr... 29 3.6
Z79756-8|CAB02122.1| 891|Caenorhabditis elegans Hypothetical pr... 29 3.6
Z79756-7|CAK12561.1| 855|Caenorhabditis elegans Hypothetical pr... 29 3.6
Z48367-5|CAE54886.1| 993|Caenorhabditis elegans Hypothetical pr... 29 3.6
Z48367-4|CAA88324.1| 1110|Caenorhabditis elegans Hypothetical pr... 29 3.6
U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (gr... 29 3.6
U29096-1|AAA68406.1| 105|Caenorhabditis elegans Neuropeptide-li... 29 3.6
Z78013-1|CAB01425.3| 1140|Caenorhabditis elegans Hypothetical pr... 29 4.8
Z83114-7|CAJ76943.1| 525|Caenorhabditis elegans Hypothetical pr... 29 6.3
Z83114-6|CAB63235.1| 589|Caenorhabditis elegans Hypothetical pr... 29 6.3
Z81094-7|CAB03153.2| 960|Caenorhabditis elegans Hypothetical pr... 28 8.3
U97407-6|AAB52481.1| 751|Caenorhabditis elegans Tyrosinase prot... 28 8.3
U64609-1|AAB04598.1| 405|Caenorhabditis elegans Sperm-specific ... 28 8.3
U62772-1|AAB04136.1| 763|Caenorhabditis elegans RNA helicase pr... 28 8.3
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 28 8.3
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 28 8.3
L19948-1|AAC27384.1| 763|Caenorhabditis elegans RNA helicase pr... 28 8.3
AL110490-3|CAB54449.1| 892|Caenorhabditis elegans Hypothetical ... 28 8.3
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 28 8.3
AF000197-1|AAB52901.2| 763|Caenorhabditis elegans Germ-line hel... 28 8.3
>AF025467-10|AAB71040.2| 154|Caenorhabditis elegans He1 homologue
protein 1 protein.
Length = 154
Score = 47.2 bits (107), Expect = 2e-05
Identities = 30/106 (28%), Positives = 43/106 (40%), Gaps = 2/106 (1%)
Frame = +3
Query: 204 ELTPAVNSRLCHLXKGKNAKVSFDFTPQFSTTKLKTGLFGLKNGAEIPFDALYNADACTL 383
ELT ++C KG + F P T KLKT + G+ + N+DACT
Sbjct: 40 ELTVKDGKKVCLFKKGSRPIIQIAFKPSKDTDKLKTSVRAKVGGSAMVDFPQTNSDACTY 99
Query: 384 -TSCPTEAGKTQTLDFSLHIXKXLPTXN-FEFXXNLWNXDXDSHMC 515
CP AG+ Q + S+ I + P + L D +C
Sbjct: 100 GVKCPVSAGENQIFEQSISITENHPAGEVIQVNWQLTRPDSGKEVC 145
>Z54238-1|CAA90992.2| 281|Caenorhabditis elegans Hypothetical
protein T28C6.1 protein.
Length = 281
Score = 35.5 bits (78), Expect = 0.055
Identities = 22/57 (38%), Positives = 23/57 (40%), Gaps = 2/57 (3%)
Frame = -3
Query: 797 GXGGGEKVRXKXYWGGMGXGAXXGRXLRGENAAGXGDXXGXVWGG--GGSXXGGXXG 633
G GGG GG G G+ GR G AG WGG GGS GG G
Sbjct: 51 GTGGGRGGGRGGSGGGRGGGSGGGRGGSGGAGAGGSGSGSGGWGGQDGGSSAGGWGG 107
Score = 33.1 bits (72), Expect = 0.29
Identities = 17/55 (30%), Positives = 19/55 (34%)
Frame = -3
Query: 797 GXGGGEKVRXKXYWGGMGXGAXXGRXLRGENAAGXGDXXGXVWGGGGSXXGGXXG 633
G GG + + WGG G G G G WGG G GG G
Sbjct: 169 GWGGSQDGGSQGGWGGQNGGGQGGNQGGGGGRGGNQGGEQGGWGGQGGSQGGSQG 223
Score = 29.5 bits (63), Expect = 3.6
Identities = 18/53 (33%), Positives = 24/53 (45%)
Frame = -3
Query: 803 GXGXGGGEKVRXKXYWGGMGXGAXXGRXLRGENAAGXGDXXGXVWGGGGSXXG 645
G G GG + + WGG G G+ G +G + G G+ G GG G G
Sbjct: 196 GGGGRGGNQGGEQGGWGGQG-GSQGGS--QGGSQGGWGNQGGQQGGGRGGQQG 245
Score = 29.1 bits (62), Expect = 4.8
Identities = 16/52 (30%), Positives = 17/52 (32%)
Frame = -2
Query: 798 GGWGXGESAMXXVLGWHGXGGXXRAXAXRGECXGXX*XXGVXVGGXGEXXGG 643
GGWG + GW G G RG G G GG GG
Sbjct: 133 GGWGGQQGGNSNAGGWGGSQGGQNGGGGRGGSGGQGGWGGSQDGGSQGGWGG 184
>AL117204-23|CAB55137.1| 285|Caenorhabditis elegans Hypothetical
protein Y116A8C.35 protein.
Length = 285
Score = 35.5 bits (78), Expect = 0.055
Identities = 22/57 (38%), Positives = 22/57 (38%)
Frame = -3
Query: 803 GXGXGGGEKVRXKXYWGGMGXGAXXGRXLRGENAAGXGDXXGXVWGGGGSXXGGXXG 633
G G GGG WGG G G R G G G G GGGG GG G
Sbjct: 218 GGGGGGGGGYGSGGGWGGGGGGRDRDRG--GWGGGGGGRGYGGGGGGGGYGYGGGGG 272
>U58755-7|AAB00696.1| 136|Caenorhabditis elegans Hypothetical
protein C34D4.11 protein.
Length = 136
Score = 33.9 bits (74), Expect = 0.17
Identities = 21/58 (36%), Positives = 21/58 (36%), Gaps = 1/58 (1%)
Frame = -3
Query: 803 GXGXGGG-EKVRXKXYWGGMGXGAXXGRXLRGENAAGXGDXXGXVWGGGGSXXGGXXG 633
G G GGG WGG G G G G G G G GGG GG G
Sbjct: 65 GGGRGGGWGNNGGGGNWGGNGGGGNGGGGRGGGGGGGGGRGGGGGGRGGGGGGGGGRG 122
Score = 31.9 bits (69), Expect = 0.68
Identities = 17/44 (38%), Positives = 18/44 (40%), Gaps = 2/44 (4%)
Frame = -3
Query: 758 WGGMGXGAXXGRXLRGENAAGXGDXXGXVWG--GGGSXXGGXXG 633
WG G G RG +G G G WG GGG GG G
Sbjct: 43 WGRPGWGGGGPGWGRGGGGSGWGGGRGGGWGNNGGGGNWGGNGG 86
Score = 28.3 bits (60), Expect = 8.3
Identities = 22/58 (37%), Positives = 22/58 (37%), Gaps = 1/58 (1%)
Frame = -3
Query: 803 GXGXGGGEKVRXKXYWGGMGXGAXXGRXLRGENAAGXGDXXGXVWG-GGGSXXGGXXG 633
G G GGG WGG G G G G N G G G GGG GG G
Sbjct: 54 GWGRGGGGSG-----WGG-GRGGGWGNNGGGGNWGGNGGGGNGGGGRGGGGGGGGGRG 105
>AL032637-18|CAE17998.1| 193|Caenorhabditis elegans Hypothetical
protein Y43F8C.20 protein.
Length = 193
Score = 33.5 bits (73), Expect = 0.22
Identities = 20/57 (35%), Positives = 21/57 (36%)
Frame = -3
Query: 803 GXGXGGGEKVRXKXYWGGMGXGAXXGRXLRGENAAGXGDXXGXVWGGGGSXXGGXXG 633
G GGG + WGG G G N G G G GGGG GG G
Sbjct: 89 GGNGGGGRGGGGRGDWGGNNNGGGGNWGGGGNNDGGWGGNNG---GGGGGRGGGGRG 142
Score = 32.7 bits (71), Expect = 0.39
Identities = 21/57 (36%), Positives = 22/57 (38%)
Frame = -3
Query: 803 GXGXGGGEKVRXKXYWGGMGXGAXXGRXLRGENAAGXGDXXGXVWGGGGSXXGGXXG 633
G G GG R WGG G G G G G+ G WG GG GG G
Sbjct: 21 GPGGWGGGPGR----WGGWGGNRWGG----GGGPGGWGNNGGGGWGRGGGRGGGDWG 69
Score = 29.9 bits (64), Expect = 2.7
Identities = 20/60 (33%), Positives = 20/60 (33%), Gaps = 3/60 (5%)
Frame = -3
Query: 803 GXGXGGGEKVRXKXYWGGMGXGAXXGRXLRGENAAGXG---DXXGXVWGGGGSXXGGXXG 633
G GGG WGG G GR G G G G WGG G G G
Sbjct: 112 GGNWGGGGN--NDGGWGGNNGGGGGGRGGGGRGGDGRGPPGSNGGGDWGGNGGGGRGGGG 169
Score = 29.5 bits (63), Expect = 3.6
Identities = 17/52 (32%), Positives = 18/52 (34%)
Frame = -2
Query: 798 GGWGXGESAMXXVLGWHGXGGXXRAXAXRGECXGXX*XXGVXVGGXGEXXGG 643
G WG W G GG R RG+ G G GG G GG
Sbjct: 76 GNWGGNGGGRGD---WGGNGGGGRGGGGRGDWGGNNNGGGGNWGGGGNNDGG 124
Score = 28.7 bits (61), Expect = 6.3
Identities = 14/42 (33%), Positives = 15/42 (35%)
Frame = -3
Query: 758 WGGMGXGAXXGRXLRGENAAGXGDXXGXVWGGGGSXXGGXXG 633
WG G G RG G + G WGG G G G
Sbjct: 49 WGNNGGGGWGRGGGRGGGDWGGNNGGGGNWGGNGGGRGDWGG 90
>AF045646-2|AAK29827.1| 371|Caenorhabditis elegans Collagen protein
103 protein.
Length = 371
Score = 33.1 bits (72), Expect = 0.29
Identities = 19/54 (35%), Positives = 22/54 (40%)
Frame = -3
Query: 803 GXGXGGGEKVRXKXYWGGMGXGAXXGRXLRGENAAGXGDXXGXVWGGGGSXXGG 642
G G G G Y G +G G G G + G G G +GGGG GG
Sbjct: 79 GYGGGHGGAAVGGGYGGAVGGGGGGGYG--GGHGGGHGGAVGGGYGGGGGGGGG 130
>Z83219-3|CAD57687.1| 965|Caenorhabditis elegans Hypothetical
protein C31C9.6 protein.
Length = 965
Score = 32.7 bits (71), Expect = 0.39
Identities = 15/53 (28%), Positives = 19/53 (35%)
Frame = +2
Query: 641 PPPXXSPXPPTXTPXXHXXPXHSPLXAXALNXPPXPCHPNTLXIALSPXPXPP 799
PP P PP + + P P PP P P ++ P P PP
Sbjct: 459 PPTTPKPAPPPPSRIPNPSPSPQPAEVSKSPPPPPPLPPIATPSSVPPPPPPP 511
>U10438-9|AAU87834.1| 616|Caenorhabditis elegans Hypothetical
protein B0280.13 protein.
Length = 616
Score = 32.7 bits (71), Expect = 0.39
Identities = 15/53 (28%), Positives = 19/53 (35%)
Frame = +2
Query: 641 PPPXXSPXPPTXTPXXHXXPXHSPLXAXALNXPPXPCHPNTLXIALSPXPXPP 799
PP P PP + + P P PP P P ++ P P PP
Sbjct: 466 PPTTPKPAPPPPSRIPNPSPSPQPAEVSKSPPPPPPLPPIATPSSVPPPPPPP 518
>Z68008-5|CAD91696.1| 1160|Caenorhabditis elegans Hypothetical
protein R08B4.1b protein.
Length = 1160
Score = 31.5 bits (68), Expect = 0.90
Identities = 21/57 (36%), Positives = 23/57 (40%), Gaps = 2/57 (3%)
Frame = -3
Query: 797 GXGGGEKVRXKXYWGGMGXGAXXGRXLRG--ENAAGXGDXXGXVWGGGGSXXGGXXG 633
G GGG GG G G G G N+ G G G GGGG+ GG G
Sbjct: 787 GGGGGGGNGGSGGGGGGGGGGSGGSGGGGSNSNSGGGGGNGGGGNGGGGNGNGGGAG 843
>L25598-4|AAV58888.1| 737|Caenorhabditis elegans Calpain family
protein 1, isoform b protein.
Length = 737
Score = 31.5 bits (68), Expect = 0.90
Identities = 17/41 (41%), Positives = 18/41 (43%)
Frame = -3
Query: 755 GGMGXGAXXGRXLRGENAAGXGDXXGXVWGGGGSXXGGXXG 633
GG G G G G N G G G +GGGG GG G
Sbjct: 54 GGGGGGGGGGGGFGGGNG-GFGGGGGGNYGGGGGNQGGGGG 93
>Z81555-7|CAB04518.1| 561|Caenorhabditis elegans Hypothetical
protein F58E10.3a protein.
Length = 561
Score = 31.1 bits (67), Expect = 1.2
Identities = 20/57 (35%), Positives = 23/57 (40%)
Frame = -3
Query: 803 GXGXGGGEKVRXKXYWGGMGXGAXXGRXLRGENAAGXGDXXGXVWGGGGSXXGGXXG 633
G GGG + +GG G G G G G G G +GGGG GG G
Sbjct: 13 GGSSGGGSR----GGYGGGGRGGGGG-GYSGGRGGGYGGGGGGGYGGGGYGGGGRGG 64
>U41543-12|AAZ91345.1| 401|Caenorhabditis elegans Groundhog
(hedgehog-like family)protein 7 protein.
Length = 401
Score = 31.1 bits (67), Expect = 1.2
Identities = 15/52 (28%), Positives = 18/52 (34%)
Frame = +2
Query: 641 PPPXXSPXPPTXTPXXHXXPXHSPLXAXALNXPPXPCHPNTLXIALSPXPXP 796
PPP +P P P P P A PP +P +P P P
Sbjct: 50 PPPPPAPYPQQAVPAPAPPPAPYPQHAVPAPAPPLASYPQNAVPVPAPPPAP 101
>AF000198-8|AAP68908.1| 435|Caenorhabditis elegans Collagen protein
51 protein.
Length = 435
Score = 31.1 bits (67), Expect = 1.2
Identities = 20/52 (38%), Positives = 20/52 (38%)
Frame = -3
Query: 797 GXGGGEKVRXKXYWGGMGXGAXXGRXLRGENAAGXGDXXGXVWGGGGSXXGG 642
G GGG GG G GR G A G G G GGGG GG
Sbjct: 320 GGGGGGDFPAGGGGGGYSTGGGGGRADSGGAAGGAGGAGGYS-GGGGGGGGG 370
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 30.7 bits (66), Expect = 1.6
Identities = 21/59 (35%), Positives = 21/59 (35%)
Frame = +2
Query: 641 PPPXXSPXPPTXTPXXHXXPXHSPLXAXALNXPPXPCHPNTLXIALSPXPXPPXXGXGP 817
PPP PP T P SP A PP P A SP P PP G P
Sbjct: 257 PPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPP-------RAGSPPPPPPPRGSPP 308
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 30.7 bits (66), Expect = 1.6
Identities = 21/59 (35%), Positives = 21/59 (35%)
Frame = +2
Query: 641 PPPXXSPXPPTXTPXXHXXPXHSPLXAXALNXPPXPCHPNTLXIALSPXPXPPXXGXGP 817
PPP PP T P SP A PP P A SP P PP G P
Sbjct: 278 PPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPP-------RAGSPPPPPPPRGSPP 329
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 30.7 bits (66), Expect = 1.6
Identities = 21/59 (35%), Positives = 21/59 (35%)
Frame = +2
Query: 641 PPPXXSPXPPTXTPXXHXXPXHSPLXAXALNXPPXPCHPNTLXIALSPXPXPPXXGXGP 817
PPP PP T P SP A PP P A SP P PP G P
Sbjct: 263 PPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPP-------RAGSPPPPPPPRGSPP 314
>Z78413-7|CAB01657.1| 352|Caenorhabditis elegans Hypothetical
protein T01C3.7 protein.
Length = 352
Score = 30.3 bits (65), Expect = 2.1
Identities = 19/57 (33%), Positives = 20/57 (35%)
Frame = -3
Query: 803 GXGXGGGEKVRXKXYWGGMGXGAXXGRXLRGENAAGXGDXXGXVWGGGGSXXGGXXG 633
G G GG GG G G G + G GD G G GG GG G
Sbjct: 12 GGGFRGGRGGDRGGSRGGFGGGGRGGYGGGDRGSFGGGDRGGFRGGRGGGDRGGFRG 68
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 30.3 bits (65), Expect = 2.1
Identities = 20/62 (32%), Positives = 23/62 (37%), Gaps = 3/62 (4%)
Frame = +2
Query: 641 PPPXXSPXPPTXTPXXHXXPXHSPLXAXALNXPPXPCHP-NTLXIALSP--XPXPPXXGX 811
PPP +P PP P P P + + PP P P T P P PP
Sbjct: 266 PPPSVTPMPPPMPPTPGMTPRPPPPPSSGMWPPPPPPPPGRTPGPPGMPGMPPPPPPSRF 325
Query: 812 GP 817
GP
Sbjct: 326 GP 327
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 30.3 bits (65), Expect = 2.1
Identities = 20/62 (32%), Positives = 23/62 (37%), Gaps = 3/62 (4%)
Frame = +2
Query: 641 PPPXXSPXPPTXTPXXHXXPXHSPLXAXALNXPPXPCHP-NTLXIALSP--XPXPPXXGX 811
PPP +P PP P P P + + PP P P T P P PP
Sbjct: 276 PPPSVTPMPPPMPPTPGMTPRPPPPPSSGMWPPPPPPPPGRTPGPPGMPGMPPPPPPSRF 335
Query: 812 GP 817
GP
Sbjct: 336 GP 337
>U80023-1|AAG24037.1| 180|Caenorhabditis elegans Hypothetical
protein F07C4.7 protein.
Length = 180
Score = 29.9 bits (64), Expect = 2.7
Identities = 20/59 (33%), Positives = 21/59 (35%), Gaps = 2/59 (3%)
Frame = -3
Query: 803 GXGXGGGEKVRXKXYWGGMGX--GAXXGRXLRGENAAGXGDXXGXVWGGGGSXXGGXXG 633
G G G G GG G G G G+N G G G G GG GG G
Sbjct: 97 GNGGGRGGNGGFDDNGGGRGGNGGGRGGTGGFGDNGGGRGGNGGGRGGNGGGNNGGGRG 155
>AL023858-2|CAE18058.1| 158|Caenorhabditis elegans Hypothetical
protein ZK285.2 protein.
Length = 158
Score = 29.9 bits (64), Expect = 2.7
Identities = 18/54 (33%), Positives = 21/54 (38%), Gaps = 1/54 (1%)
Frame = -3
Query: 713 GENAAGXGDXXGXVWGGGGSXX-GGXXGLXXLXGMRFTXCXVGXXTXCVVYXMG 555
GE +G G G G GG+ GG G GM+F T C Y G
Sbjct: 82 GEGKSGGGGGAGGAGGAGGAGGAGGSGGSGSGNGMKFNRSKKRKDTKCYEYEDG 135
>AF000193-3|AAB52890.1| 259|Caenorhabditis elegans Hypothetical
protein T20B6.3 protein.
Length = 259
Score = 29.9 bits (64), Expect = 2.7
Identities = 19/55 (34%), Positives = 21/55 (38%)
Frame = -3
Query: 797 GXGGGEKVRXKXYWGGMGXGAXXGRXLRGENAAGXGDXXGXVWGGGGSXXGGXXG 633
G GG + GG G G G G G G G +GGGG GG G
Sbjct: 78 GYGGSGGGAFGGFNGGYGQGGYGGGGDFG-GGMGGGGYGGGGYGGGGDGGGGYGG 131
Score = 29.9 bits (64), Expect = 2.7
Identities = 20/57 (35%), Positives = 21/57 (36%)
Frame = -3
Query: 803 GXGXGGGEKVRXKXYWGGMGXGAXXGRXLRGENAAGXGDXXGXVWGGGGSXXGGXXG 633
G G GGG +GG G G G G G G G GGG GG G
Sbjct: 167 GGGMGGGG-------YGGGGDGGYGGGGFGGGGMGGYGGGMGGGGYGGGGMGGGGYG 216
>AC024859-14|AAY43989.1| 643|Caenorhabditis elegans Hypothetical
protein Y71H2AM.19 protein.
Length = 643
Score = 29.9 bits (64), Expect = 2.7
Identities = 21/57 (36%), Positives = 24/57 (42%), Gaps = 4/57 (7%)
Frame = -3
Query: 791 GGGEKVRXKXYWGGMGXGAXXG----RXLRGENAAGXGDXXGXVWGGGGSXXGGXXG 633
GGG + R GG G G G R G G G+ G +GGGG GG G
Sbjct: 567 GGGYRGR-----GGRGNGQRFGGRDHRYQGGSGNGGGGNGGGGGFGGGGQRSGGGGG 618
>Z79756-9|CAK12562.1| 830|Caenorhabditis elegans Hypothetical
protein F53C11.5c protein.
Length = 830
Score = 29.5 bits (63), Expect = 3.6
Identities = 13/40 (32%), Positives = 18/40 (45%)
Frame = +2
Query: 641 PPPXXSPXPPTXTPXXHXXPXHSPLXAXALNXPPXPCHPN 760
PPP P P P H P H+P+ + + PP P+
Sbjct: 32 PPPH--PNAPMYYPYGHHAPSHAPMPSQKILPPPTTSAPS 69
>Z79756-8|CAB02122.1| 891|Caenorhabditis elegans Hypothetical
protein F53C11.5b protein.
Length = 891
Score = 29.5 bits (63), Expect = 3.6
Identities = 13/40 (32%), Positives = 18/40 (45%)
Frame = +2
Query: 641 PPPXXSPXPPTXTPXXHXXPXHSPLXAXALNXPPXPCHPN 760
PPP P P P H P H+P+ + + PP P+
Sbjct: 93 PPPH--PNAPMYYPYGHHAPSHAPMPSQKILPPPTTSAPS 130
>Z79756-7|CAK12561.1| 855|Caenorhabditis elegans Hypothetical
protein F53C11.5a protein.
Length = 855
Score = 29.5 bits (63), Expect = 3.6
Identities = 13/40 (32%), Positives = 18/40 (45%)
Frame = +2
Query: 641 PPPXXSPXPPTXTPXXHXXPXHSPLXAXALNXPPXPCHPN 760
PPP P P P H P H+P+ + + PP P+
Sbjct: 57 PPPH--PNAPMYYPYGHHAPSHAPMPSQKILPPPTTSAPS 94
>Z48367-5|CAE54886.1| 993|Caenorhabditis elegans Hypothetical
protein C33B4.3b protein.
Length = 993
Score = 29.5 bits (63), Expect = 3.6
Identities = 17/61 (27%), Positives = 22/61 (36%)
Frame = +2
Query: 644 PPXXSPXPPTXTPXXHXXPXHSPLXAXALNXPPXPCHPNTLXIALSPXPXPPXXGXGPHL 823
PP P PP +P ++ PP P P + P P PP G H+
Sbjct: 765 PPPPPPPPPPHCEPTMVHVEFTPPSTSSVPPPPPPLPP--ISSGAPPPPPPPPPGGLMHV 822
Query: 824 A 826
A
Sbjct: 823 A 823
>Z48367-4|CAA88324.1| 1110|Caenorhabditis elegans Hypothetical
protein C33B4.3a protein.
Length = 1110
Score = 29.5 bits (63), Expect = 3.6
Identities = 17/61 (27%), Positives = 22/61 (36%)
Frame = +2
Query: 644 PPXXSPXPPTXTPXXHXXPXHSPLXAXALNXPPXPCHPNTLXIALSPXPXPPXXGXGPHL 823
PP P PP +P ++ PP P P + P P PP G H+
Sbjct: 765 PPPPPPPPPPHCEPTMVHVEFTPPSTSSVPPPPPPLPP--ISSGAPPPPPPPPPGGLMHV 822
Query: 824 A 826
A
Sbjct: 823 A 823
>U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (grd
related) protein 4 protein.
Length = 210
Score = 29.5 bits (63), Expect = 3.6
Identities = 18/61 (29%), Positives = 20/61 (32%), Gaps = 2/61 (3%)
Frame = +2
Query: 641 PPPXXSPXPPTXTPXXHXXPXHSPLXAXALNXPPXPC--HPNTLXIALSPXPXPPXXGXG 814
PPP P PP P P P+ PP C P + P P PP
Sbjct: 27 PPPCPPPPPPMCAPPPLPCPP-PPICPPQFCPPPPMCPPPPPPPPPPMCPPPPPPMPSYS 85
Query: 815 P 817
P
Sbjct: 86 P 86
>U29096-1|AAA68406.1| 105|Caenorhabditis elegans Neuropeptide-like
protein protein32 protein.
Length = 105
Score = 29.5 bits (63), Expect = 3.6
Identities = 19/52 (36%), Positives = 19/52 (36%), Gaps = 2/52 (3%)
Frame = -3
Query: 782 EKVRXKXY--WGGMGXGAXXGRXLRGENAAGXGDXXGXVWGGGGSXXGGXXG 633
E R K Y WGG G G G G G G WG GG G G
Sbjct: 48 ESPRVKRYGGWGGRGGWGRGGGRGYGGRGGGWGGRGGG-WGRGGGGRGFYGG 98
>Z78013-1|CAB01425.3| 1140|Caenorhabditis elegans Hypothetical
protein F15B9.4 protein.
Length = 1140
Score = 29.1 bits (62), Expect = 4.8
Identities = 15/40 (37%), Positives = 17/40 (42%)
Frame = +2
Query: 698 PXHSPLXAXALNXPPXPCHPNTLXIALSPXPXPPXXGXGP 817
P S L N PP P P+ A +P P PP G P
Sbjct: 475 PPSSLLPLINTNAPPPPPMPSINGHAPNPPPPPPLLGIAP 514
>Z83114-7|CAJ76943.1| 525|Caenorhabditis elegans Hypothetical
protein K09B11.5b protein.
Length = 525
Score = 28.7 bits (61), Expect = 6.3
Identities = 16/51 (31%), Positives = 20/51 (39%)
Frame = +2
Query: 644 PPXXSPXPPTXTPXXHXXPXHSPLXAXALNXPPXPCHPNTLXIALSPXPXP 796
PP P P + P P+ ++ PP P HP T A S P P
Sbjct: 475 PPVSQP-PVSQPPVSQPPVSQPPVSQPPVSQPPVPQHPMTPPPASSARPHP 524
>Z83114-6|CAB63235.1| 589|Caenorhabditis elegans Hypothetical
protein K09B11.5a protein.
Length = 589
Score = 28.7 bits (61), Expect = 6.3
Identities = 16/51 (31%), Positives = 20/51 (39%)
Frame = +2
Query: 644 PPXXSPXPPTXTPXXHXXPXHSPLXAXALNXPPXPCHPNTLXIALSPXPXP 796
PP P P + P P+ ++ PP P HP T A S P P
Sbjct: 539 PPVSQP-PVSQPPVSQPPVSQPPVSQPPVSQPPVPQHPMTPPPASSARPHP 588
>Z81094-7|CAB03153.2| 960|Caenorhabditis elegans Hypothetical
protein F58G11.2 protein.
Length = 960
Score = 28.3 bits (60), Expect = 8.3
Identities = 18/53 (33%), Positives = 21/53 (39%)
Frame = -3
Query: 803 GXGXGGGEKVRXKXYWGGMGXGAXXGRXLRGENAAGXGDXXGXVWGGGGSXXG 645
G G GG + R +GG G G G + G G G GGGG G
Sbjct: 815 GGGFGGTGRGRGGGVFGGGGRGGDFGGSGNFGGSGGGGSFGGS--GGGGGFGG 865
>U97407-6|AAB52481.1| 751|Caenorhabditis elegans Tyrosinase protein
4 protein.
Length = 751
Score = 28.3 bits (60), Expect = 8.3
Identities = 14/36 (38%), Positives = 15/36 (41%), Gaps = 2/36 (5%)
Frame = -3
Query: 758 WGGMGXGAXXGRXLRGEN--AAGXGDXXGXVWGGGG 657
WGG G G G + G G G WGGGG
Sbjct: 693 WGGNGGGGWGNNDPWGGSRWGGGRGGWGGGGWGGGG 728
>U64609-1|AAB04598.1| 405|Caenorhabditis elegans Sperm-specific
family, class qprotein 2 protein.
Length = 405
Score = 28.3 bits (60), Expect = 8.3
Identities = 17/50 (34%), Positives = 20/50 (40%)
Frame = -3
Query: 791 GGGEKVRXKXYWGGMGXGAXXGRXLRGENAAGXGDXXGXVWGGGGSXXGG 642
GGG V Y+G +G GA G G G + GGG GG
Sbjct: 347 GGGGAVGQSAYFG-VGGGAAGGAKTGGGGGGGIPGQSMYMGAGGGGGAGG 395
>U62772-1|AAB04136.1| 763|Caenorhabditis elegans RNA helicase
protein.
Length = 763
Score = 28.3 bits (60), Expect = 8.3
Identities = 25/88 (28%), Positives = 28/88 (31%), Gaps = 3/88 (3%)
Frame = -3
Query: 803 GXGXGGGEKVRXKXYWGGMGXGAXXGRXLRGENAAGXGDXXGXVWG---GGGSXXGGXXG 633
G G GGG K G G G G G N G G G G GGG+ G G
Sbjct: 31 GSGFGGG-----KNGGTGFGGGNTGGSGFGGGNTGGSGFGGGKAGGSGFGGGNTCGSGFG 85
Query: 632 LXXLXGMRFTXCXVGXXTXCVVYXMGAG 549
G + G G+G
Sbjct: 86 GGSTGGSPYGGASSGFGGSTATSGFGSG 113
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 28.3 bits (60), Expect = 8.3
Identities = 20/63 (31%), Positives = 21/63 (33%), Gaps = 4/63 (6%)
Frame = +2
Query: 641 PPPXXSPXPPTXTPXXHXXPXHSPLXAXA---LNXPPXPCHPNTLX-IALSPXPXPPXXG 808
PP P PP P P P PP P P L I+ P P PP G
Sbjct: 707 PPITGGPPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPG 766
Query: 809 XGP 817
P
Sbjct: 767 GCP 769
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 28.3 bits (60), Expect = 8.3
Identities = 20/63 (31%), Positives = 21/63 (33%), Gaps = 4/63 (6%)
Frame = +2
Query: 641 PPPXXSPXPPTXTPXXHXXPXHSPLXAXA---LNXPPXPCHPNTLX-IALSPXPXPPXXG 808
PP P PP P P P PP P P L I+ P P PP G
Sbjct: 707 PPITGGPPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPG 766
Query: 809 XGP 817
P
Sbjct: 767 GCP 769
>L19948-1|AAC27384.1| 763|Caenorhabditis elegans RNA helicase
protein.
Length = 763
Score = 28.3 bits (60), Expect = 8.3
Identities = 25/88 (28%), Positives = 28/88 (31%), Gaps = 3/88 (3%)
Frame = -3
Query: 803 GXGXGGGEKVRXKXYWGGMGXGAXXGRXLRGENAAGXGDXXGXVWG---GGGSXXGGXXG 633
G G GGG K G G G G G N G G G G GGG+ G G
Sbjct: 31 GSGFGGG-----KNGGTGFGGGNTGGSGFGGGNTGGSGFGGGKTGGSGFGGGNTCGSGFG 85
Query: 632 LXXLXGMRFTXCXVGXXTXCVVYXMGAG 549
G + G G+G
Sbjct: 86 GGSTGGSPYGGASSGFGGSTATSGFGSG 113
>AL110490-3|CAB54449.1| 892|Caenorhabditis elegans Hypothetical
protein Y48B6A.3 protein.
Length = 892
Score = 28.3 bits (60), Expect = 8.3
Identities = 20/61 (32%), Positives = 24/61 (39%), Gaps = 4/61 (6%)
Frame = -3
Query: 803 GXGXGGGEKVRX---KXYWGGMGXGAXXGRXLRGENAAGX-GDXXGXVWGGGGSXXGGXX 636
G G GGG R + Y G G G + + G G G +GGGG GG
Sbjct: 787 GGGGGGGYNDRQDFGRNYGGRDGGGPQRYHDQQQQRQGGYQGGGYGGGYGGGGGGGGGGG 846
Query: 635 G 633
G
Sbjct: 847 G 847
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 28.3 bits (60), Expect = 8.3
Identities = 20/63 (31%), Positives = 21/63 (33%), Gaps = 4/63 (6%)
Frame = +2
Query: 641 PPPXXSPXPPTXTPXXHXXPXHSPLXAXA---LNXPPXPCHPNTLX-IALSPXPXPPXXG 808
PP P PP P P P PP P P L I+ P P PP G
Sbjct: 290 PPITGGPPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPG 349
Query: 809 XGP 817
P
Sbjct: 350 GCP 352
>AF000197-1|AAB52901.2| 763|Caenorhabditis elegans Germ-line
helicase protein 1 protein.
Length = 763
Score = 28.3 bits (60), Expect = 8.3
Identities = 25/88 (28%), Positives = 28/88 (31%), Gaps = 3/88 (3%)
Frame = -3
Query: 803 GXGXGGGEKVRXKXYWGGMGXGAXXGRXLRGENAAGXGDXXGXVWG---GGGSXXGGXXG 633
G G GGG K G G G G G N G G G G GGG+ G G
Sbjct: 31 GSGFGGG-----KNGGTGFGGGNTGGSGFGGGNTGGSGFGGGKTGGSGFGGGNTCGSGFG 85
Query: 632 LXXLXGMRFTXCXVGXXTXCVVYXMGAG 549
G + G G+G
Sbjct: 86 GGSTGGSPYGGASSGFGGSTATSGFGSG 113
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,755,737
Number of Sequences: 27780
Number of extensions: 260162
Number of successful extensions: 951
Number of sequences better than 10.0: 43
Number of HSP's better than 10.0 without gapping: 668
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 849
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2412704140
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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