Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP16_F_P08
(844 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X62636-1|CAA44502.1| 326|Drosophila melanogaster hrp36.1 protein. 31 1.5
X54803-1|CAA38574.1| 386|Drosophila melanogaster Hrb87F protein. 31 1.5
X59691-1|CAA42212.1| 386|Drosophila melanogaster P11 (hnRNP pro... 31 2.0
X58183-1|CAA41170.1| 386|Drosophila melanogaster heterogeneous ... 31 2.0
BT012315-1|AAS77440.1| 385|Drosophila melanogaster LD32727p pro... 30 3.5
AE014297-1716|AAF54967.1| 385|Drosophila melanogaster CG12749-P... 30 3.5
AE014297-1715|AAN13574.1| 325|Drosophila melanogaster CG12749-P... 30 3.5
AY865067-2|AAW79466.1| 632|Drosophila melanogaster SR-CI protein. 30 4.6
AY865066-2|AAW79464.1| 632|Drosophila melanogaster SR-CI protein. 30 4.6
AY865062-2|AAW79456.1| 632|Drosophila melanogaster SR-CI protein. 30 4.6
AY864368-1|AAX38006.1| 575|Drosophila melanogaster scavenger re... 30 4.6
AY349704-1|AAQ75563.1| 601|Drosophila melanogaster Sr-CI protein. 30 4.6
AY349701-1|AAQ75560.1| 601|Drosophila melanogaster Sr-CI protein. 30 4.6
>X62636-1|CAA44502.1| 326|Drosophila melanogaster hrp36.1 protein.
Length = 326
Score = 31.5 bits (68), Expect = 1.5
Identities = 28/102 (27%), Positives = 35/102 (34%), Gaps = 2/102 (1%)
Frame = +1
Query: 238 GGGKVFGTLGQNDDGLFGKAGYNREIFNDXRGQLTGXAYGTRXLXPGGD--SXNYGGRLD 411
GG + G GQ D G G G+ + + G G G GG+ GG
Sbjct: 206 GGPRAGGRGGQGDRGQ-GGGGWGGQNRQNGGGNWGGAGGGGGFGNSGGNFGGGQGGGSGG 264
Query: 412 WAXKNAQAAXDINXQIGGRSGMTASGSGVWDXDKNTXXSAGG 537
W + N Q GG G G G N+ S GG
Sbjct: 265 WNQQGGSGGGPWNNQGGGNGGWNGGGGGGGYGGGNSNGSWGG 306
>X54803-1|CAA38574.1| 386|Drosophila melanogaster Hrb87F protein.
Length = 386
Score = 31.5 bits (68), Expect = 1.5
Identities = 28/102 (27%), Positives = 35/102 (34%), Gaps = 2/102 (1%)
Frame = +1
Query: 238 GGGKVFGTLGQNDDGLFGKAGYNREIFNDXRGQLTGXAYGTRXLXPGGD--SXNYGGRLD 411
GG + G GQ D G G G+ + + G G G GG+ GG
Sbjct: 206 GGPRAGGRGGQGDRGQ-GGGGWGGQNRQNGGGNWGGAGGGGGFGNSGGNFGGGQGGGSGG 264
Query: 412 WAXKNAQAAXDINXQIGGRSGMTASGSGVWDXDKNTXXSAGG 537
W + N Q GG G G G N+ S GG
Sbjct: 265 WNQQGGSGGGPWNNQGGGNGGWNGGGGGGGYGGGNSNGSWGG 306
>X59691-1|CAA42212.1| 386|Drosophila melanogaster P11 (hnRNP
protein) protein.
Length = 386
Score = 31.1 bits (67), Expect = 2.0
Identities = 28/102 (27%), Positives = 35/102 (34%), Gaps = 2/102 (1%)
Frame = +1
Query: 238 GGGKVFGTLGQNDDGLFGKAGYNREIFNDXRGQLTGXAYGTRXLXPGGD--SXNYGGRLD 411
GG + G GQ D G G G+ + + G G G GG+ GG
Sbjct: 206 GGPRAGGRGGQGDRGQ-GGGGWGGQNRQNGGGNWGGAGGGGGFGNSGGNFGGGQGGGSGG 264
Query: 412 WAXKNAQAAXDINXQIGGRSGMTASGSGVWDXDKNTXXSAGG 537
W + N Q GG G G G N+ S GG
Sbjct: 265 WNQQGGTGGGPWNNQGGGNGGWNGGGGGGGYGGGNSNGSWGG 306
>X58183-1|CAA41170.1| 386|Drosophila melanogaster heterogeneous
nuclear ribonucleoproteinprotein.
Length = 386
Score = 31.1 bits (67), Expect = 2.0
Identities = 30/103 (29%), Positives = 37/103 (35%), Gaps = 3/103 (2%)
Frame = +1
Query: 238 GGGKVFGTLGQNDDGLFGKA--GYNREIFN-DXRGQLTGXAYGTRXLXPGGDSXNYGGRL 408
GG + G GQ D G G G NR+ + G+ G +G GG GG
Sbjct: 206 GGPRAGGRGGQGDRGQGGGGWGGQNRQNGGGNWGGRGGGGGFGNSGGNFGGGQG--GGSG 263
Query: 409 DWAXKNAQAAXDINXQIGGRSGMTASGSGVWDXDKNTXXSAGG 537
W + N Q GG G G G N+ S GG
Sbjct: 264 GWNQQGGTGGGPWNNQGGGNGGWNGGGGGGGYGGGNSNGSWGG 306
>BT012315-1|AAS77440.1| 385|Drosophila melanogaster LD32727p
protein.
Length = 385
Score = 30.3 bits (65), Expect = 3.5
Identities = 28/102 (27%), Positives = 36/102 (35%), Gaps = 2/102 (1%)
Frame = +1
Query: 238 GGGKVFGTLGQNDDGLFGKAGYNREIFNDXRGQLTGXAYGTRXLXPGGD--SXNYGGRLD 411
GG + G GQ D G G G+ + + G G G GG+ GG
Sbjct: 206 GGPRAGGRGGQGDRGQ-GGGGWGGQNRQNGGGNWGGAGGGGGFGNSGGNFGGGQGGGSGG 264
Query: 412 WAXKNAQAAXDINXQIGGRSGMTASGSGVWDXDKNTXXSAGG 537
W + N Q GG G G G + N+ S GG
Sbjct: 265 WNQQGGSGGGPWNNQGGGNGGWNGGGGGGYGGG-NSNGSWGG 305
>AE014297-1716|AAF54967.1| 385|Drosophila melanogaster CG12749-PA,
isoform A protein.
Length = 385
Score = 30.3 bits (65), Expect = 3.5
Identities = 28/102 (27%), Positives = 36/102 (35%), Gaps = 2/102 (1%)
Frame = +1
Query: 238 GGGKVFGTLGQNDDGLFGKAGYNREIFNDXRGQLTGXAYGTRXLXPGGD--SXNYGGRLD 411
GG + G GQ D G G G+ + + G G G GG+ GG
Sbjct: 206 GGPRAGGRGGQGDRGQ-GGGGWGGQNRQNGGGNWGGAGGGGGFGNSGGNFGGGQGGGSGG 264
Query: 412 WAXKNAQAAXDINXQIGGRSGMTASGSGVWDXDKNTXXSAGG 537
W + N Q GG G G G + N+ S GG
Sbjct: 265 WNQQGGSGGGPWNNQGGGNGGWNGGGGGGYGGG-NSNGSWGG 305
>AE014297-1715|AAN13574.1| 325|Drosophila melanogaster CG12749-PB,
isoform B protein.
Length = 325
Score = 30.3 bits (65), Expect = 3.5
Identities = 28/102 (27%), Positives = 36/102 (35%), Gaps = 2/102 (1%)
Frame = +1
Query: 238 GGGKVFGTLGQNDDGLFGKAGYNREIFNDXRGQLTGXAYGTRXLXPGGD--SXNYGGRLD 411
GG + G GQ D G G G+ + + G G G GG+ GG
Sbjct: 206 GGPRAGGRGGQGDRGQ-GGGGWGGQNRQNGGGNWGGAGGGGGFGNSGGNFGGGQGGGSGG 264
Query: 412 WAXKNAQAAXDINXQIGGRSGMTASGSGVWDXDKNTXXSAGG 537
W + N Q GG G G G + N+ S GG
Sbjct: 265 WNQQGGSGGGPWNNQGGGNGGWNGGGGGGYGGG-NSNGSWGG 305
>AY865067-2|AAW79466.1| 632|Drosophila melanogaster SR-CI protein.
Length = 632
Score = 29.9 bits (64), Expect = 4.6
Identities = 24/87 (27%), Positives = 39/87 (44%)
Frame = +2
Query: 200 RHPR*TSRGTREWEEGRSSALWDRTTMDYSVKPVTTERFSMMXAVS*PAXLTAPGSXDPE 379
+ P T+ T+ R++ TT + KP TT + M S T+ S P
Sbjct: 428 KRPTTTTTTTKATTTKRTTTTKKPTTTSTTPKPTTTTSTTPMTTTS-TTFTTSTTSTRPT 486
Query: 380 VTALTTVDVWTGPXRTHKLPLT*TDKS 460
T TT++V+T T +P + T+K+
Sbjct: 487 TT--TTINVFTTKKTTIMIPTSSTEKT 511
>AY865066-2|AAW79464.1| 632|Drosophila melanogaster SR-CI protein.
Length = 632
Score = 29.9 bits (64), Expect = 4.6
Identities = 24/87 (27%), Positives = 39/87 (44%)
Frame = +2
Query: 200 RHPR*TSRGTREWEEGRSSALWDRTTMDYSVKPVTTERFSMMXAVS*PAXLTAPGSXDPE 379
+ P T+ T+ R++ TT + KP TT + M S T+ S P
Sbjct: 428 KRPTTTTTTTKATTTKRTTTTKKPTTTSTTPKPTTTTSTTPMTTTS-TTFTTSTTSTRPT 486
Query: 380 VTALTTVDVWTGPXRTHKLPLT*TDKS 460
T TT++V+T T +P + T+K+
Sbjct: 487 TT--TTINVFTTKKTTIMIPTSSTEKT 511
>AY865062-2|AAW79456.1| 632|Drosophila melanogaster SR-CI protein.
Length = 632
Score = 29.9 bits (64), Expect = 4.6
Identities = 24/87 (27%), Positives = 39/87 (44%)
Frame = +2
Query: 200 RHPR*TSRGTREWEEGRSSALWDRTTMDYSVKPVTTERFSMMXAVS*PAXLTAPGSXDPE 379
+ P T+ T+ R++ TT + KP TT + M S T+ S P
Sbjct: 428 KRPTTTTTTTKATTTKRTTTTKKPTTTSTTPKPTTTTSTTPMTTTS-TTFTTSTTSTRPT 486
Query: 380 VTALTTVDVWTGPXRTHKLPLT*TDKS 460
T TT++V+T T +P + T+K+
Sbjct: 487 TT--TTINVFTTKKTTIMIPTSSTEKT 511
>AY864368-1|AAX38006.1| 575|Drosophila melanogaster scavenger
receptor protein.
Length = 575
Score = 29.9 bits (64), Expect = 4.6
Identities = 24/87 (27%), Positives = 39/87 (44%)
Frame = +2
Query: 200 RHPR*TSRGTREWEEGRSSALWDRTTMDYSVKPVTTERFSMMXAVS*PAXLTAPGSXDPE 379
+ P T+ T+ R++ TT + KP TT + M S T+ S P
Sbjct: 371 KRPTTTTTTTKATTTKRTTTTKKPTTTSTTPKPTTTTSTTPMTTTS-TTFTTSTTSTRPT 429
Query: 380 VTALTTVDVWTGPXRTHKLPLT*TDKS 460
T TT++V+T T +P + T+K+
Sbjct: 430 TT--TTINVFTTKKTTIMIPTSSTEKT 454
>AY349704-1|AAQ75563.1| 601|Drosophila melanogaster Sr-CI protein.
Length = 601
Score = 29.9 bits (64), Expect = 4.6
Identities = 24/87 (27%), Positives = 39/87 (44%)
Frame = +2
Query: 200 RHPR*TSRGTREWEEGRSSALWDRTTMDYSVKPVTTERFSMMXAVS*PAXLTAPGSXDPE 379
+ P T+ T+ R++ TT + KP TT + M S T+ S P
Sbjct: 427 KRPTTTTTTTKATTTKRTTTTKKPTTTSTTPKPTTTTSTTPMTTTS-TTFTTSTTSTRPT 485
Query: 380 VTALTTVDVWTGPXRTHKLPLT*TDKS 460
T TT++V+T T +P + T+K+
Sbjct: 486 TT--TTINVFTTKKTTIMIPTSSTEKT 510
>AY349701-1|AAQ75560.1| 601|Drosophila melanogaster Sr-CI protein.
Length = 601
Score = 29.9 bits (64), Expect = 4.6
Identities = 24/87 (27%), Positives = 39/87 (44%)
Frame = +2
Query: 200 RHPR*TSRGTREWEEGRSSALWDRTTMDYSVKPVTTERFSMMXAVS*PAXLTAPGSXDPE 379
+ P T+ T+ R++ TT + KP TT + M S T+ S P
Sbjct: 427 KRPTTTTTTTKATTTKRTTTTKKPTTTSTTPKPTTTTSTTPMTTTS-TTFTTSTTSTRPT 485
Query: 380 VTALTTVDVWTGPXRTHKLPLT*TDKS 460
T TT++V+T T +P + T+K+
Sbjct: 486 TT--TTINVFTTKKTTIMIPTSSTEKT 510
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 31,353,735
Number of Sequences: 53049
Number of extensions: 596134
Number of successful extensions: 1198
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 1170
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1198
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 4024321392
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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