Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP16_F_P06
         (874 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U39851-12|AAV58884.1|  137|Caenorhabditis elegans Hypothetical p...    85   6e-17
U39851-11|AAV58883.1|  171|Caenorhabditis elegans Hypothetical p...    85   6e-17
U39851-10|AAM22035.1|  144|Caenorhabditis elegans Hypothetical p...    85   6e-17

>U39851-12|AAV58884.1|  137|Caenorhabditis elegans Hypothetical
           protein C23G10.2c protein.
          Length = 137

 Score = 85.0 bits (201), Expect = 6e-17
 Identities = 46/98 (46%), Positives = 58/98 (59%)
 Frame = +1

Query: 142 IITSPEIYQPVGPYSQAILADKTLYISGILGLDRDAQMVCGGAEAQTRQALDNLRHVLEA 321
           II+S      +GPYSQA+ A  T+Y+SG LGLD     +  G   QT Q+L NL  VL+A
Sbjct: 9   IISSANAPGAIGPYSQAVRAGNTIYLSGSLGLDPKTGDLKEGVVEQTHQSLKNLGEVLKA 68

Query: 322 GGASLESVVKTTVLLASMDDFXTFNKVYAXYXPXACPA 435
            GA   +VVKTTVLL ++ DF   N+VY  Y     PA
Sbjct: 69  AGADYGNVVKTTVLLQNIADFAAVNEVYGQYFKSPYPA 106


>U39851-11|AAV58883.1|  171|Caenorhabditis elegans Hypothetical
           protein C23G10.2a protein.
          Length = 171

 Score = 85.0 bits (201), Expect = 6e-17
 Identities = 46/98 (46%), Positives = 58/98 (59%)
 Frame = +1

Query: 142 IITSPEIYQPVGPYSQAILADKTLYISGILGLDRDAQMVCGGAEAQTRQALDNLRHVLEA 321
           II+S      +GPYSQA+ A  T+Y+SG LGLD     +  G   QT Q+L NL  VL+A
Sbjct: 43  IISSANAPGAIGPYSQAVRAGNTIYLSGSLGLDPKTGDLKEGVVEQTHQSLKNLGEVLKA 102

Query: 322 GGASLESVVKTTVLLASMDDFXTFNKVYAXYXPXACPA 435
            GA   +VVKTTVLL ++ DF   N+VY  Y     PA
Sbjct: 103 AGADYGNVVKTTVLLQNIADFAAVNEVYGQYFKSPYPA 140


>U39851-10|AAM22035.1|  144|Caenorhabditis elegans Hypothetical
           protein C23G10.2b protein.
          Length = 144

 Score = 85.0 bits (201), Expect = 6e-17
 Identities = 46/98 (46%), Positives = 58/98 (59%)
 Frame = +1

Query: 142 IITSPEIYQPVGPYSQAILADKTLYISGILGLDRDAQMVCGGAEAQTRQALDNLRHVLEA 321
           II+S      +GPYSQA+ A  T+Y+SG LGLD     +  G   QT Q+L NL  VL+A
Sbjct: 16  IISSANAPGAIGPYSQAVRAGNTIYLSGSLGLDPKTGDLKEGVVEQTHQSLKNLGEVLKA 75

Query: 322 GGASLESVVKTTVLLASMDDFXTFNKVYAXYXPXACPA 435
            GA   +VVKTTVLL ++ DF   N+VY  Y     PA
Sbjct: 76  AGADYGNVVKTTVLLQNIADFAAVNEVYGQYFKSPYPA 113


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,990,983
Number of Sequences: 27780
Number of extensions: 216603
Number of successful extensions: 871
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 656
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 871
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2192413762
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)