Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP16_F_P03
(872 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z25749-1|CAA81022.1| 194|Homo sapiens ribosomal protein S7 prot... 276 9e-74
M77233-1|AAB00969.1| 192|Homo sapiens ribosomal protein protein. 276 9e-74
BC071919-1|AAH71919.1| 194|Homo sapiens ribosomal protein S7 pr... 276 9e-74
BC061901-1|AAH61901.1| 194|Homo sapiens ribosomal protein S7 pr... 276 9e-74
BC002866-1|AAH02866.1| 194|Homo sapiens ribosomal protein S7 pr... 276 9e-74
AC108488-2|AAX82027.1| 194|Homo sapiens unknown protein. 276 9e-74
AB209386-1|BAD92623.1| 78|Homo sapiens ribosomal protein S7 va... 87 6e-17
>Z25749-1|CAA81022.1| 194|Homo sapiens ribosomal protein S7
protein.
Length = 194
Score = 276 bits (676), Expect = 9e-74
Identities = 134/186 (72%), Positives = 159/186 (85%), Gaps = 1/186 (0%)
Frame = +2
Query: 74 STKIIKASGAEADSFETSISQALVELETNSDLKAQLRELYITKAKEIELHN-KKSIIIYV 250
S KI+K +G + D FE+ ISQAL+ELE NSDLKAQLREL IT AKEIE+ +K+III+V
Sbjct: 5 SAKIVKPNGEKPDEFESGISQALLELEMNSDLKAQLRELNITAAKEIEVGGGRKAIIIFV 64
Query: 251 PMPKLKAFQKIQIRLVRELXKKFSGKHVVFVGDRKILPKPSHKTRVANKQKRPRSRTLTS 430
P+P+LK+FQKIQ+RLVREL KKFSGKHVVF+ R+ILPKP+ K+R NKQKRPRSRTLT+
Sbjct: 65 PVPQLKSFQKIQVRLVRELEKKFSGKHVVFIAQRRILPKPTRKSRTKNKQKRPRSRTLTA 124
Query: 431 VYDAILEDLVFPAEIVGKRIRVKLDGSQLIKVXLDXNQQTTIEHKVDTFQSVYKXLTGRE 610
V+DAILEDLVFP+EIVGKRIRVKLDGS+LIKV LD QQ +EHKV+TF VYK LTG++
Sbjct: 125 VHDAILEDLVFPSEIVGKRIRVKLDGSRLIKVHLDKAQQNNVEHKVETFSGVYKKLTGKD 184
Query: 611 VTFEFP 628
V FEFP
Sbjct: 185 VNFEFP 190
>M77233-1|AAB00969.1| 192|Homo sapiens ribosomal protein protein.
Length = 192
Score = 276 bits (676), Expect = 9e-74
Identities = 134/186 (72%), Positives = 159/186 (85%), Gaps = 1/186 (0%)
Frame = +2
Query: 74 STKIIKASGAEADSFETSISQALVELETNSDLKAQLRELYITKAKEIELHN-KKSIIIYV 250
S KI+K +G + D FE+ ISQAL+ELE NSDLKAQLREL IT AKEIE+ +K+III+V
Sbjct: 3 SAKIVKPNGEKPDEFESGISQALLELEMNSDLKAQLRELNITAAKEIEVGGGRKAIIIFV 62
Query: 251 PMPKLKAFQKIQIRLVRELXKKFSGKHVVFVGDRKILPKPSHKTRVANKQKRPRSRTLTS 430
P+P+LK+FQKIQ+RLVREL KKFSGKHVVF+ R+ILPKP+ K+R NKQKRPRSRTLT+
Sbjct: 63 PVPQLKSFQKIQVRLVRELEKKFSGKHVVFIAQRRILPKPTRKSRTKNKQKRPRSRTLTA 122
Query: 431 VYDAILEDLVFPAEIVGKRIRVKLDGSQLIKVXLDXNQQTTIEHKVDTFQSVYKXLTGRE 610
V+DAILEDLVFP+EIVGKRIRVKLDGS+LIKV LD QQ +EHKV+TF VYK LTG++
Sbjct: 123 VHDAILEDLVFPSEIVGKRIRVKLDGSRLIKVHLDKAQQNNVEHKVETFSGVYKKLTGKD 182
Query: 611 VTFEFP 628
V FEFP
Sbjct: 183 VNFEFP 188
>BC071919-1|AAH71919.1| 194|Homo sapiens ribosomal protein S7
protein.
Length = 194
Score = 276 bits (676), Expect = 9e-74
Identities = 134/186 (72%), Positives = 159/186 (85%), Gaps = 1/186 (0%)
Frame = +2
Query: 74 STKIIKASGAEADSFETSISQALVELETNSDLKAQLRELYITKAKEIELHN-KKSIIIYV 250
S KI+K +G + D FE+ ISQAL+ELE NSDLKAQLREL IT AKEIE+ +K+III+V
Sbjct: 5 SAKIVKPNGEKPDEFESGISQALLELEMNSDLKAQLRELNITAAKEIEVGGGRKAIIIFV 64
Query: 251 PMPKLKAFQKIQIRLVRELXKKFSGKHVVFVGDRKILPKPSHKTRVANKQKRPRSRTLTS 430
P+P+LK+FQKIQ+RLVREL KKFSGKHVVF+ R+ILPKP+ K+R NKQKRPRSRTLT+
Sbjct: 65 PVPQLKSFQKIQVRLVRELEKKFSGKHVVFIAQRRILPKPTRKSRTKNKQKRPRSRTLTA 124
Query: 431 VYDAILEDLVFPAEIVGKRIRVKLDGSQLIKVXLDXNQQTTIEHKVDTFQSVYKXLTGRE 610
V+DAILEDLVFP+EIVGKRIRVKLDGS+LIKV LD QQ +EHKV+TF VYK LTG++
Sbjct: 125 VHDAILEDLVFPSEIVGKRIRVKLDGSRLIKVHLDKAQQNNVEHKVETFSGVYKKLTGKD 184
Query: 611 VTFEFP 628
V FEFP
Sbjct: 185 VNFEFP 190
>BC061901-1|AAH61901.1| 194|Homo sapiens ribosomal protein S7
protein.
Length = 194
Score = 276 bits (676), Expect = 9e-74
Identities = 134/186 (72%), Positives = 159/186 (85%), Gaps = 1/186 (0%)
Frame = +2
Query: 74 STKIIKASGAEADSFETSISQALVELETNSDLKAQLRELYITKAKEIELHN-KKSIIIYV 250
S KI+K +G + D FE+ ISQAL+ELE NSDLKAQLREL IT AKEIE+ +K+III+V
Sbjct: 5 SAKIVKPNGEKPDEFESGISQALLELEMNSDLKAQLRELNITAAKEIEVGGGRKAIIIFV 64
Query: 251 PMPKLKAFQKIQIRLVRELXKKFSGKHVVFVGDRKILPKPSHKTRVANKQKRPRSRTLTS 430
P+P+LK+FQKIQ+RLVREL KKFSGKHVVF+ R+ILPKP+ K+R NKQKRPRSRTLT+
Sbjct: 65 PVPQLKSFQKIQVRLVRELEKKFSGKHVVFIAQRRILPKPTRKSRTKNKQKRPRSRTLTA 124
Query: 431 VYDAILEDLVFPAEIVGKRIRVKLDGSQLIKVXLDXNQQTTIEHKVDTFQSVYKXLTGRE 610
V+DAILEDLVFP+EIVGKRIRVKLDGS+LIKV LD QQ +EHKV+TF VYK LTG++
Sbjct: 125 VHDAILEDLVFPSEIVGKRIRVKLDGSRLIKVHLDKAQQNNVEHKVETFSGVYKKLTGKD 184
Query: 611 VTFEFP 628
V FEFP
Sbjct: 185 VNFEFP 190
>BC002866-1|AAH02866.1| 194|Homo sapiens ribosomal protein S7
protein.
Length = 194
Score = 276 bits (676), Expect = 9e-74
Identities = 134/186 (72%), Positives = 159/186 (85%), Gaps = 1/186 (0%)
Frame = +2
Query: 74 STKIIKASGAEADSFETSISQALVELETNSDLKAQLRELYITKAKEIELHN-KKSIIIYV 250
S KI+K +G + D FE+ ISQAL+ELE NSDLKAQLREL IT AKEIE+ +K+III+V
Sbjct: 5 SAKIVKPNGEKPDEFESGISQALLELEMNSDLKAQLRELNITAAKEIEVGGGRKAIIIFV 64
Query: 251 PMPKLKAFQKIQIRLVRELXKKFSGKHVVFVGDRKILPKPSHKTRVANKQKRPRSRTLTS 430
P+P+LK+FQKIQ+RLVREL KKFSGKHVVF+ R+ILPKP+ K+R NKQKRPRSRTLT+
Sbjct: 65 PVPQLKSFQKIQVRLVRELEKKFSGKHVVFIAQRRILPKPTRKSRTKNKQKRPRSRTLTA 124
Query: 431 VYDAILEDLVFPAEIVGKRIRVKLDGSQLIKVXLDXNQQTTIEHKVDTFQSVYKXLTGRE 610
V+DAILEDLVFP+EIVGKRIRVKLDGS+LIKV LD QQ +EHKV+TF VYK LTG++
Sbjct: 125 VHDAILEDLVFPSEIVGKRIRVKLDGSRLIKVHLDKAQQNNVEHKVETFSGVYKKLTGKD 184
Query: 611 VTFEFP 628
V FEFP
Sbjct: 185 VNFEFP 190
>AC108488-2|AAX82027.1| 194|Homo sapiens unknown protein.
Length = 194
Score = 276 bits (676), Expect = 9e-74
Identities = 134/186 (72%), Positives = 159/186 (85%), Gaps = 1/186 (0%)
Frame = +2
Query: 74 STKIIKASGAEADSFETSISQALVELETNSDLKAQLRELYITKAKEIELHN-KKSIIIYV 250
S KI+K +G + D FE+ ISQAL+ELE NSDLKAQLREL IT AKEIE+ +K+III+V
Sbjct: 5 SAKIVKPNGEKPDEFESGISQALLELEMNSDLKAQLRELNITAAKEIEVGGGRKAIIIFV 64
Query: 251 PMPKLKAFQKIQIRLVRELXKKFSGKHVVFVGDRKILPKPSHKTRVANKQKRPRSRTLTS 430
P+P+LK+FQKIQ+RLVREL KKFSGKHVVF+ R+ILPKP+ K+R NKQKRPRSRTLT+
Sbjct: 65 PVPQLKSFQKIQVRLVRELEKKFSGKHVVFIAQRRILPKPTRKSRTKNKQKRPRSRTLTA 124
Query: 431 VYDAILEDLVFPAEIVGKRIRVKLDGSQLIKVXLDXNQQTTIEHKVDTFQSVYKXLTGRE 610
V+DAILEDLVFP+EIVGKRIRVKLDGS+LIKV LD QQ +EHKV+TF VYK LTG++
Sbjct: 125 VHDAILEDLVFPSEIVGKRIRVKLDGSRLIKVHLDKAQQNNVEHKVETFSGVYKKLTGKD 184
Query: 611 VTFEFP 628
V FEFP
Sbjct: 185 VNFEFP 190
>AB209386-1|BAD92623.1| 78|Homo sapiens ribosomal protein S7
variant protein.
Length = 78
Score = 87.4 bits (207), Expect = 6e-17
Identities = 42/52 (80%), Positives = 47/52 (90%)
Frame = +2
Query: 413 SRTLTSVYDAILEDLVFPAEIVGKRIRVKLDGSQLIKVXLDXNQQTTIEHKV 568
SRTLT+V+DAILEDLVFP+EIVGKRIRVKLDGS+LIKV LD QQ +EHKV
Sbjct: 10 SRTLTAVHDAILEDLVFPSEIVGKRIRVKLDGSRLIKVHLDKAQQNNVEHKV 61
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 97,163,455
Number of Sequences: 237096
Number of extensions: 2070992
Number of successful extensions: 3472
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 3281
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3456
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11104084400
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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