Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP16_F_P01
(879 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC644.15 |rpp101|rpp1-1|60S acidic ribosomal protein Rpp1-1|Sc... 82 9e-17
SPBC3B9.13c |rpp102|rpp1-2|60S acidic ribosomal protein Rpp1-2|S... 80 4e-16
SPCP1E11.09c |rpp103|rpp1-3|60S acidic ribosomal protein Rpp1-3|... 75 1e-14
SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr... 45 2e-05
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 42 9e-05
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 42 2e-04
SPBC660.06 |||conserved fungal protein|Schizosaccharomyces pombe... 40 6e-04
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 39 0.001
SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr 2|||M... 33 0.001
SPBC20F10.01 |gar1|SPBC25H2.01c|snoRNP pseudouridylase complex p... 38 0.002
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 38 0.002
SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit Spp42|Schizosac... 35 0.018
SPAC140.02 |gar2||GAR family|Schizosaccharomyces pombe|chr 1|||M... 31 0.16
SPAC1F5.04c |cdc12||formin Cdc12|Schizosaccharomyces pombe|chr 1... 26 0.19
SPCC830.07c |psi1|psi|DNAJ domain protein Psi1|Schizosaccharomyc... 29 0.66
SPAC2F3.14c |||conserved fungal protein|Schizosaccharomyces pomb... 29 0.87
SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family ... 29 0.87
SPBC83.01 |ucp8||UBA/EH/EF hand domain protein Ucp8|Schizosaccha... 28 1.5
SPAC19G12.10c |cpy1|pcy1|vacuolar carboxypeptidase Y|Schizosacch... 28 2.0
SPAC26A3.16 |dph1|ucp5|UBA domain protein Dph1|Schizosaccharomyc... 27 2.7
SPAPJ760.02c |app1||App1 protein|Schizosaccharomyces pombe|chr 1... 27 2.7
SPCC962.06c |bpb1|sf1|zinc finger protein Bpb1|Schizosaccharomyc... 27 2.7
SPCC18.14c |rpp0||60S acidic ribosomal protein Rpp0 |Schizosacch... 27 3.5
SPBP8B7.06 |rpp201|rpp2, rpp2-1|60S acidic ribosomal protein P2A... 27 3.5
SPBC23G7.15c |rpp202|rpp2-2|60S acidic ribosomal protein P2B sub... 27 3.5
SPAC1071.08 |rpp203|rpp2-3, rla6|60S acidic ribosomal protein P2... 27 3.5
SPBC557.04 |ppk29||Ark1/Prk1 family protein kinase Ppk29|Schizos... 27 4.7
SPAC22F3.05c |alp41||ADP-ribosylation factor Alp41|Schizosacchar... 27 4.7
SPACUNK4.07c |cta4|sev4, SPAPYUK71.01|P-type ATPase, calcium tra... 27 4.7
SPAC20G4.02c |fus1||formin Fus1|Schizosaccharomyces pombe|chr 1|... 26 6.1
SPCC306.09c |cap1|cap|adenylyl cyclase-associated protein Cap1|S... 26 6.1
SPBC8D2.20c |sec31||COPII-coated vesicle component Sec31 |Schizo... 26 6.1
SPCP1E11.02 |ppk38||Ark1/Prk1 family protein kinase Ppk38|Schizo... 26 8.1
SPAC31G5.01 |sap49|SPAPB1A11.05|RNA-binding protein Sap49|Schizo... 26 8.1
SPBC13E7.03c |||RNA hairpin binding protein |Schizosaccharomyces... 26 8.1
>SPAC644.15 |rpp101|rpp1-1|60S acidic ribosomal protein
Rpp1-1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 109
Score = 82.2 bits (194), Expect = 9e-17
Identities = 45/111 (40%), Positives = 61/111 (54%)
Frame = +1
Query: 109 VSKAELACVYSALILVDDDVAVTGEKISTILKAAAVDVEPYWPGLFAKALEGINVRDLIT 288
+S +ELA YSALIL D+ + +T +K+ ++ KAA VDVEP W +FAKALEG ++++L+
Sbjct: 1 MSASELATSYSALILADEGIEITSDKLLSLTKAANVDVEPIWATIFAKALEGKDLKELLL 60
Query: 289 NIGSGVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSDDDMGFGLFD 441
NIGSG SD+DMGFGLFD
Sbjct: 61 NIGSGA--GAAPVAGGAAAPAAADGEAPAEEKEEAKEEEESDEDMGFGLFD 109
>SPBC3B9.13c |rpp102|rpp1-2|60S acidic ribosomal protein
Rpp1-2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 110
Score = 80.2 bits (189), Expect = 4e-16
Identities = 44/111 (39%), Positives = 60/111 (54%)
Frame = +1
Query: 109 VSKAELACVYSALILVDDDVAVTGEKISTILKAAAVDVEPYWPGLFAKALEGINVRDLIT 288
+S +ELA YSALIL D+ + +T +K+ ++ KAA VDVEP W +FAKALEG ++++L+
Sbjct: 1 MSASELATSYSALILADEGIEITSDKLLSLTKAANVDVEPIWATIFAKALEGKDLKELLL 60
Query: 289 NIGSGVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSDDDMGFGLFD 441
NIGS SD+DMGFGLFD
Sbjct: 61 NIGSAA-AAPAAGGAGAPAAAAGGEAAAEEQKEEAKEEEESDEDMGFGLFD 110
>SPCP1E11.09c |rpp103|rpp1-3|60S acidic ribosomal protein
Rpp1-3|Schizosaccharomyces pombe|chr 3|||Manual
Length = 109
Score = 74.9 bits (176), Expect = 1e-14
Identities = 41/111 (36%), Positives = 59/111 (53%)
Frame = +1
Query: 109 VSKAELACVYSALILVDDDVAVTGEKISTILKAAAVDVEPYWPGLFAKALEGINVRDLIT 288
+S +ELA Y+ALIL D+ + +T +K+ ++ KA V+VEP W +FAKALEG ++++L+
Sbjct: 1 MSASELATSYAALILADEGIEITSDKLLSLTKAGNVEVEPIWATIFAKALEGKDLKELLL 60
Query: 289 NIGSGVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSDDDMGFGLFD 441
NIGS SD+DMGFGLFD
Sbjct: 61 NIGSA--GAASAPTAAGAGAAAPAEAAEEEKKEEAKEEEESDEDMGFGLFD 109
>SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 305
Score = 44.8 bits (101), Expect = 2e-05
Identities = 27/66 (40%), Positives = 29/66 (43%), Gaps = 1/66 (1%)
Frame = -2
Query: 872 GGRXAGXGGXGXXXGG-GGXXGGKGXXLGGXRGXPEGGXWGAXEXGRKKGGFWXPXXGGG 696
GGR GG G GG GG GG+G GG RG GG G +GG GG
Sbjct: 9 GGRGGSRGGRGGFNGGRGGFGGGRGGARGGGRGGARGGRGGRGGARGGRGG----SSGGR 64
Query: 695 GGXXSG 678
GG G
Sbjct: 65 GGAKGG 70
Score = 37.1 bits (82), Expect = 0.003
Identities = 23/53 (43%), Positives = 25/53 (47%), Gaps = 1/53 (1%)
Frame = -2
Query: 875 GGGRXAGXGG-XGXXXGGGGXXGGKGXXLGGXRGXPEGGXWGAXEXGRKKGGF 720
GG R G GG G G GG GG+G GG RG +GG E R G F
Sbjct: 33 GGARGGGRGGARGGRGGRGGARGGRGGSSGG-RGGAKGGAKVIIEPHRHAGVF 84
Score = 32.3 bits (70), Expect = 0.094
Identities = 16/31 (51%), Positives = 16/31 (51%), Gaps = 1/31 (3%)
Frame = -3
Query: 631 GGXRGXXGXXGGGGXG-GGGXXXXXGGGXGG 542
GG RG G GG G GGG GGG GG
Sbjct: 12 GGSRGGRGGFNGGRGGFGGGRGGARGGGRGG 42
Score = 31.1 bits (67), Expect = 0.22
Identities = 14/30 (46%), Positives = 14/30 (46%)
Frame = -3
Query: 631 GGXRGXXGXXGGGGXGGGGXXXXXGGGXGG 542
GG RG G GG G GG GG GG
Sbjct: 41 GGARGGRGGRGGARGGRGGSSGGRGGAKGG 70
Score = 28.3 bits (60), Expect = 1.5
Identities = 15/33 (45%), Positives = 15/33 (45%), Gaps = 1/33 (3%)
Frame = -3
Query: 631 GGXRGXXGXXGG-GGXGGGGXXXXXGGGXGGVG 536
GG G G GG GG GG GG GG G
Sbjct: 16 GGRGGFNGGRGGFGGGRGGARGGGRGGARGGRG 48
Score = 28.3 bits (60), Expect = 1.5
Identities = 15/33 (45%), Positives = 15/33 (45%), Gaps = 1/33 (3%)
Frame = -3
Query: 631 GGXRGXXGXXGGGGXGGG-GXXXXXGGGXGGVG 536
GG G G GGG GG G GG GG G
Sbjct: 26 GGFGGGRGGARGGGRGGARGGRGGRGGARGGRG 58
Score = 27.9 bits (59), Expect(2) = 0.22
Identities = 16/44 (36%), Positives = 19/44 (43%), Gaps = 1/44 (2%)
Frame = -2
Query: 821 GXXGGKGXXLGGXRGXPEG-GXWGAXEXGRKKGGFWXPXXGGGG 693
G GG+G GG G G G +G G + GG G GG
Sbjct: 6 GSRGGRGGSRGGRGGFNGGRGGFGGGRGGARGGGRGGARGGRGG 49
Score = 27.5 bits (58), Expect = 2.7
Identities = 13/29 (44%), Positives = 13/29 (44%)
Frame = -3
Query: 628 GXRGXXGXXGGGGXGGGGXXXXXGGGXGG 542
G RG G GG G G GGG GG
Sbjct: 6 GSRGGRGGSRGGRGGFNGGRGGFGGGRGG 34
Score = 27.5 bits (58), Expect = 2.7
Identities = 13/30 (43%), Positives = 13/30 (43%)
Frame = -3
Query: 631 GGXRGXXGXXGGGGXGGGGXXXXXGGGXGG 542
GG G G GG GG G GG GG
Sbjct: 23 GGRGGFGGGRGGARGGGRGGARGGRGGRGG 52
Score = 21.8 bits (44), Expect(2) = 0.22
Identities = 9/20 (45%), Positives = 9/20 (45%)
Frame = -2
Query: 599 GGGGXGXGGGGXXGGGXXGG 540
GG G GG GG GG
Sbjct: 51 GGARGGRGGSSGGRGGAKGG 70
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 42.3 bits (95), Expect = 9e-05
Identities = 40/131 (30%), Positives = 40/131 (30%), Gaps = 18/131 (13%)
Frame = +1
Query: 541 PPXXPPPXX------PPPPX----PXPPPPXXXP---RXPGPPXXXXXXXXXXXXXXXXP 681
PP PPP P PP P PPPP P R P P P
Sbjct: 337 PPPPPPPRSNAAGSIPLPPQGRSAPPPPPPRSAPSTGRQPPPLSSSRAVSNPPAPPPAIP 396
Query: 682 XFXXXXXXXXXXXXXXFFRPXSXAPHXPPSGXPLXPPKXXP-LP---PXXPP-PPXXXPX 846
P P PPS P PP P LP P PP PP
Sbjct: 397 GRSAPALPPLGNASRTSTPPVPTPPSLPPSAPPSLPPSAPPSLPMGAPAAPPLPPSAPIA 456
Query: 847 PPXPAXRPPPP 879
PP PA P P
Sbjct: 457 PPLPAGMPAAP 467
Score = 40.7 bits (91), Expect = 3e-04
Identities = 35/119 (29%), Positives = 35/119 (29%), Gaps = 7/119 (5%)
Frame = +1
Query: 544 PXXPPPXXPPPPXPXPPPPXXXPRXPGPPXXXXXXXXXXXXXXXXPXFXXXXXXXXXXXX 723
P PPP P PPP PP P
Sbjct: 361 PPPPPPRSAPSTGRQPPPLSSSRAVSNPPAPPPAIPGRSAPAL--PPLGNASRTSTPPVP 418
Query: 724 XXFFRPXSXAPHXPPSGXPLXP---PKXXPLPPXXP--PP-PXXXP-XPPXPAXRPPPP 879
P S P PPS P P P PLPP P PP P P PP P P PP
Sbjct: 419 TPPSLPPSAPPSLPPSAPPSLPMGAPAAPPLPPSAPIAPPLPAGMPAAPPLPPAAPAPP 477
Score = 37.9 bits (84), Expect = 0.002
Identities = 18/43 (41%), Positives = 20/43 (46%)
Frame = +1
Query: 751 APHXPPSGXPLXPPKXXPLPPXXPPPPXXXPXPPXPAXRPPPP 879
AP PPS P+ PP +P P PP PP PA P P
Sbjct: 446 APPLPPSA-PIAPPLPAGMPAAPPLPPAAPAPPPAPAPAPAAP 487
Score = 31.1 bits (67), Expect = 0.22
Identities = 17/61 (27%), Positives = 20/61 (32%)
Frame = +2
Query: 542 PPXPPPXXXXXPPXPXPPPPXXSXGPPXPPXXEAQLAXXXXXXXXXXXSXPPPXXKXAXK 721
PP PPP P S PP PP + A + PPP + A
Sbjct: 312 PPPPPPSRRNRGKPPIGNGSSNSSLPPPPPPPRSNAAGSIPLPPQGRSAPPPPPPRSAPS 371
Query: 722 T 724
T
Sbjct: 372 T 372
Score = 29.9 bits (64), Expect = 0.50
Identities = 30/117 (25%), Positives = 34/117 (29%), Gaps = 11/117 (9%)
Frame = +3
Query: 543 PPXPPPXXXXXPPPPXPPP-PXXP-------XXPRXPP*XRPNWXXXXXXXXXXRXR--- 689
PP PPP PP PP P P PP P+ + R
Sbjct: 254 PPIPPPSNGTVSSPPNSPPRPIAPVSMNPAINSTSKPPLPPPSSRVSAAALAANKKRPPP 313
Query: 690 XPPPXXXXPPKPPFLSXXLGRXXXXXXXXXXXPXQXXTFTTPXXPPPXXXPXPPXPR 860
PPP KPP + G P + P P P PP PR
Sbjct: 314 PPPPSRRNRGKPPIGN---GSSNSSLPPPPPPPRSNAAGSIPLPPQGRSAPPPPPPR 367
Score = 28.7 bits (61), Expect = 1.2
Identities = 12/31 (38%), Positives = 12/31 (38%)
Frame = +3
Query: 540 TPPXPPPXXXXXPPPPXPPPPXXPXXPRXPP 632
TPP P P PP PP P P P
Sbjct: 414 TPPVPTPPSLPPSAPPSLPPSAPPSLPMGAP 444
Score = 28.7 bits (61), Expect = 1.2
Identities = 13/31 (41%), Positives = 13/31 (41%), Gaps = 1/31 (3%)
Frame = +1
Query: 541 PPXXPP-PXXPPPPXPXPPPPXXXPRXPGPP 630
PP P P PP P P P P P PP
Sbjct: 447 PPLPPSAPIAPPLPAGMPAAPPLPPAAPAPP 477
Score = 27.5 bits (58), Expect = 2.7
Identities = 18/49 (36%), Positives = 19/49 (38%), Gaps = 6/49 (12%)
Frame = +1
Query: 751 APHXPPSGXPLXPPK-----XXPLPPXXPPPP-XXXPXPPXPAXRPPPP 879
AP PPS PP+ P PP PPP PP RP P
Sbjct: 229 APPIPPSIPSSRPPERVPSLSAPAPPPIPPPSNGTVSSPPNSPPRPIAP 277
Score = 27.5 bits (58), Expect = 2.7
Identities = 11/29 (37%), Positives = 11/29 (37%)
Frame = +2
Query: 542 PPXPPPXXXXXPPXPXPPPPXXSXGPPXP 628
PP PP P P PP PP P
Sbjct: 432 PPSAPPSLPMGAPAAPPLPPSAPIAPPLP 460
Score = 26.2 bits (55), Expect = 6.1
Identities = 14/39 (35%), Positives = 14/39 (35%), Gaps = 3/39 (7%)
Frame = +3
Query: 537 PTPPXPPPXXXXXPPPP---XPPPPXXPXXPRXPP*XRP 644
P P PP PP P PP P P PP P
Sbjct: 444 PAAPPLPPSAPIAPPLPAGMPAAPPLPPAAPAPPPAPAP 482
Score = 25.8 bits (54), Expect = 8.1
Identities = 9/18 (50%), Positives = 9/18 (50%)
Frame = +1
Query: 544 PXXPPPXXPPPPXPXPPP 597
P PP PPP P P P
Sbjct: 467 PPLPPAAPAPPPAPAPAP 484
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 41.5 bits (93), Expect = 2e-04
Identities = 20/49 (40%), Positives = 21/49 (42%), Gaps = 2/49 (4%)
Frame = +1
Query: 739 PXSXAPHXPPSGXP--LXPPKXXPLPPXXPPPPXXXPXPPXPAXRPPPP 879
P S P P S P + P P P PPPP P P P PPPP
Sbjct: 1686 PVSTPPVRPQSAAPPQMSAPTPPPPPMSVPPPPSAPPMPAGPPSAPPPP 1734
Score = 39.9 bits (89), Expect = 5e-04
Identities = 15/30 (50%), Positives = 15/30 (50%)
Frame = +1
Query: 541 PPXXPPPXXPPPPXPXPPPPXXXPRXPGPP 630
PP P PPPP PPPP P GPP
Sbjct: 1699 PPQMSAPTPPPPPMSVPPPPSAPPMPAGPP 1728
Score = 37.1 bits (82), Expect = 0.003
Identities = 20/49 (40%), Positives = 21/49 (42%), Gaps = 3/49 (6%)
Frame = +1
Query: 736 RPXSXAPHXPPSGXPLXPPKXXPLPPXXPP---PPXXXPXPPXPAXRPP 873
RP S AP + P PP P PP PP P P PP PA P
Sbjct: 1693 RPQSAAPPQMSAPTPPPPPMSVPPPPSAPPMPAGPPSAPPPPLPASSAP 1741
Score = 35.9 bits (79), Expect = 0.008
Identities = 14/30 (46%), Positives = 14/30 (46%)
Frame = +1
Query: 541 PPXXPPPXXPPPPXPXPPPPXXXPRXPGPP 630
P PPP PPP PP P P P PP
Sbjct: 1705 PTPPPPPMSVPPPPSAPPMPAGPPSAPPPP 1734
Score = 30.7 bits (66), Expect = 0.29
Identities = 18/46 (39%), Positives = 19/46 (41%), Gaps = 3/46 (6%)
Frame = +1
Query: 751 APHXPPSGXPLXPPKXXP---LPPXXPPPPXXXPXPPXPAXRPPPP 879
AP P S P+ P P P PPPP P PP PP P
Sbjct: 1682 APAHPVSTPPVRPQSAAPPQMSAPTPPPPPMSVPPPPS---APPMP 1724
Score = 29.5 bits (63), Expect = 0.66
Identities = 13/30 (43%), Positives = 13/30 (43%), Gaps = 1/30 (3%)
Frame = +1
Query: 541 PPXXPP-PXXPPPPXPXPPPPXXXPRXPGP 627
PP PP P PP P P P P P P
Sbjct: 1717 PPSAPPMPAGPPSAPPPPLPASSAPSVPNP 1746
Score = 27.9 bits (59), Expect = 2.0
Identities = 13/31 (41%), Positives = 13/31 (41%)
Frame = +2
Query: 536 PXPPXPPPXXXXXPPXPXPPPPXXSXGPPXP 628
P PP PP PP PPP S P P
Sbjct: 1715 PPPPSAPP-MPAGPPSAPPPPLPASSAPSVP 1744
Score = 27.5 bits (58), Expect = 2.7
Identities = 15/35 (42%), Positives = 15/35 (42%), Gaps = 4/35 (11%)
Frame = +3
Query: 540 TPPXPP----PXXXXXPPPPXPPPPXXPXXPRXPP 632
TPP P P P PP PPP P P PP
Sbjct: 1689 TPPVRPQSAAPPQMSAPTPP-PPPMSVPPPPSAPP 1722
Score = 27.5 bits (58), Expect = 2.7
Identities = 11/27 (40%), Positives = 11/27 (40%)
Frame = +1
Query: 541 PPXXPPPXXPPPPXPXPPPPXXXPRXP 621
PP PP PP P PP P P
Sbjct: 1710 PPMSVPPPPSAPPMPAGPPSAPPPPLP 1736
Score = 27.1 bits (57), Expect = 3.5
Identities = 11/30 (36%), Positives = 11/30 (36%)
Frame = +1
Query: 541 PPXXPPPXXPPPPXPXPPPPXXXPRXPGPP 630
PP P P P PPPP P P
Sbjct: 1715 PPPPSAPPMPAGPPSAPPPPLPASSAPSVP 1744
Score = 26.6 bits (56), Expect(2) = 0.19
Identities = 16/43 (37%), Positives = 17/43 (39%)
Frame = +1
Query: 739 PXSXAPHXPPSGXPLXPPKXXPLPPXXPPPPXXXPXPPXPAXR 867
P S P PPS P+ P P P P P P P P R
Sbjct: 1711 PMSVPP--PPSAPPM--PAGPPSAPPPPLPASSAPSVPNPGDR 1749
Score = 26.2 bits (55), Expect = 6.1
Identities = 15/52 (28%), Positives = 19/52 (36%), Gaps = 6/52 (11%)
Frame = +1
Query: 739 PXSXAPHXPPSGXPLXPPKXXPLPPXXP------PPPXXXPXPPXPAXRPPP 876
P + + H P P P+ P P P P P PP P + PP
Sbjct: 1436 PGAPSNHAPQVVPPAPMHAVAPVQPKAPGMVTNAPAPSSAPAPPAPVSQLPP 1487
Score = 23.0 bits (47), Expect(2) = 0.19
Identities = 10/29 (34%), Positives = 10/29 (34%)
Frame = +1
Query: 544 PXXPPPXXPPPPXPXPPPPXXXPRXPGPP 630
P P P P PP P P PP
Sbjct: 1683 PAHPVSTPPVRPQSAAPPQMSAPTPPPPP 1711
>SPBC660.06 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 273
Score = 39.5 bits (88), Expect = 6e-04
Identities = 24/62 (38%), Positives = 24/62 (38%)
Frame = -2
Query: 875 GGGRXAGXGGXGXXXGGGGXXGGKGXXLGGXRGXPEGGXWGAXEXGRKKGGFWXPXXGGG 696
G G G GG G G GG G GG G P G G G GGF G G
Sbjct: 203 GPGGFGGFGGFGGEGHHHGGHGGFGGGPGGFEGGPGGFGGGPGGFGGGLGGFGGGPGGFG 262
Query: 695 GG 690
GG
Sbjct: 263 GG 264
Score = 39.1 bits (87), Expect = 8e-04
Identities = 25/63 (39%), Positives = 25/63 (39%)
Frame = -2
Query: 878 GGGGRXAGXGGXGXXXGGGGXXGGKGXXLGGXRGXPEGGXWGAXEXGRKKGGFWXPXXGG 699
G GG G GG G G GG G GG G P G G G GGF G
Sbjct: 196 GSGGPPPGPGGFGGFGGFGGEGHHHGGH-GGFGGGPGGFEGGPGGFGGGPGGFGGGLGGF 254
Query: 698 GGG 690
GGG
Sbjct: 255 GGG 257
Score = 38.7 bits (86), Expect = 0.001
Identities = 26/66 (39%), Positives = 26/66 (39%), Gaps = 4/66 (6%)
Frame = -2
Query: 878 GGGGRXAGXGGXGXXXGG----GGXXGGKGXXLGGXRGXPEGGXWGAXEXGRKKGGFWXP 711
GG G G GG G GG GG GG GG G P G G G GGF
Sbjct: 205 GGFGGFGGFGGEGHHHGGHGGFGGGPGGFEGGPGGFGGGPGGFGGGLGGFGGGPGGFGGG 264
Query: 710 XXGGGG 693
G GG
Sbjct: 265 PGGHGG 270
Score = 35.5 bits (78), Expect = 0.010
Identities = 16/32 (50%), Positives = 16/32 (50%)
Frame = -3
Query: 631 GGXRGXXGXXGGGGXGGGGXXXXXGGGXGGVG 536
GG G G GGG G GG GGG GG G
Sbjct: 231 GGFEGGPGGFGGGPGGFGGGLGGFGGGPGGFG 262
Score = 33.5 bits (73), Expect = 0.041
Identities = 27/68 (39%), Positives = 28/68 (41%), Gaps = 5/68 (7%)
Frame = -2
Query: 878 GGGGRXAGXGGXGXXXGGG-----GXXGGKGXXLGGXRGXPEGGXWGAXEXGRKKGGFWX 714
GGG G G G G G G GG+G GG G GG G E G GGF
Sbjct: 187 GGGFGGFGGGSGGPPPGPGGFGGFGGFGGEGHHHGGHGGF--GGGPGGFEGG--PGGFGG 242
Query: 713 PXXGGGGG 690
G GGG
Sbjct: 243 GPGGFGGG 250
Score = 33.1 bits (72), Expect = 0.054
Identities = 16/32 (50%), Positives = 16/32 (50%)
Frame = -3
Query: 631 GGXRGXXGXXGGGGXGGGGXXXXXGGGXGGVG 536
GG G G GGG G GG GGG GG G
Sbjct: 238 GGFGGGPGGFGGGLGGFGGGPGGFGGGPGGHG 269
Score = 30.3 bits (65), Expect = 0.38
Identities = 14/29 (48%), Positives = 14/29 (48%)
Frame = -1
Query: 621 GGPXXXXGGGGXGXGGXXXXXGGGXGGXG 535
GG GGG G GG GGG GG G
Sbjct: 241 GGGPGGFGGGLGGFGGGPGGFGGGPGGHG 269
Score = 29.1 bits (62), Expect = 0.87
Identities = 14/32 (43%), Positives = 14/32 (43%)
Frame = -3
Query: 631 GGXRGXXGXXGGGGXGGGGXXXXXGGGXGGVG 536
G G G GGG G G GGG GG G
Sbjct: 217 GHHHGGHGGFGGGPGGFEGGPGGFGGGPGGFG 248
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 38.7 bits (86), Expect = 0.001
Identities = 15/32 (46%), Positives = 15/32 (46%)
Frame = +2
Query: 536 PXPPXPPPXXXXXPPXPXPPPPXXSXGPPXPP 631
P P PP PP P PPP GPP PP
Sbjct: 748 PIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPP 779
Score = 36.7 bits (81), Expect = 0.004
Identities = 13/22 (59%), Positives = 13/22 (59%)
Frame = +3
Query: 537 PTPPXPPPXXXXXPPPPXPPPP 602
P PP PPP PPP PPPP
Sbjct: 761 PPPPPPPPGVAGAGPPPPPPPP 782
Score = 36.7 bits (81), Expect = 0.004
Identities = 13/22 (59%), Positives = 13/22 (59%)
Frame = +3
Query: 537 PTPPXPPPXXXXXPPPPXPPPP 602
P PP PP PPPP PPPP
Sbjct: 762 PPPPPPPGVAGAGPPPPPPPPP 783
Score = 34.7 bits (76), Expect = 0.018
Identities = 16/47 (34%), Positives = 18/47 (38%)
Frame = +1
Query: 739 PXSXAPHXPPSGXPLXPPKXXPLPPXXPPPPXXXPXPPXPAXRPPPP 879
P P P+ P+ PP P PPPP P PPPP
Sbjct: 737 PAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPPP 783
Score = 33.9 bits (74), Expect = 0.031
Identities = 15/33 (45%), Positives = 15/33 (45%), Gaps = 3/33 (9%)
Frame = +2
Query: 542 PPXPPPXXXXXP---PXPXPPPPXXSXGPPXPP 631
PP PP P P P PPP GPP PP
Sbjct: 733 PPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPP 765
Score = 33.1 bits (72), Expect = 0.054
Identities = 15/33 (45%), Positives = 15/33 (45%), Gaps = 3/33 (9%)
Frame = +2
Query: 542 PPXPPPXXXXXPPXPXP---PPPXXSXGPPXPP 631
PP PPP P P P PPP G P PP
Sbjct: 732 PPPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPP 764
Score = 32.3 bits (70), Expect = 0.094
Identities = 17/49 (34%), Positives = 20/49 (40%), Gaps = 6/49 (12%)
Frame = +1
Query: 751 APHXPPSGXPLXPPKXXPLPPXXPPPPXXXPXPPXP------AXRPPPP 879
+P PP + P P+P P P P PP P A PPPP
Sbjct: 731 SPPPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPP 779
Score = 31.1 bits (67), Expect = 0.22
Identities = 13/30 (43%), Positives = 13/30 (43%)
Frame = +1
Query: 541 PPXXPPPXXPPPPXPXPPPPXXXPRXPGPP 630
PP P PPPP P P P P PP
Sbjct: 752 PPPAPIMGGPPPPPPPPGVAGAGPPPPPPP 781
Score = 30.7 bits (66), Expect = 0.29
Identities = 15/35 (42%), Positives = 15/35 (42%), Gaps = 1/35 (2%)
Frame = +1
Query: 529 LXTXPPXXPPPXXPPPPXPXP-PPPXXXPRXPGPP 630
L PP PP P P P P P P P GPP
Sbjct: 728 LLKSPPPPPPAVIVPTPAPAPIPVPPPAPIMGGPP 762
Score = 30.3 bits (65), Expect = 0.38
Identities = 15/33 (45%), Positives = 15/33 (45%), Gaps = 1/33 (3%)
Frame = +3
Query: 537 PTP-PXPPPXXXXXPPPPXPPPPXXPXXPRXPP 632
P P P PPP PPP PPPP PP
Sbjct: 746 PAPIPVPPPAPIMGGPPP-PPPPPGVAGAGPPP 777
Score = 28.3 bits (60), Expect = 1.5
Identities = 22/68 (32%), Positives = 24/68 (35%), Gaps = 2/68 (2%)
Frame = +3
Query: 540 TPPXPPP--XXXXXPPPPXPPPPXXPXXPRXPP*XRPNWXXXXXXXXXXRXRXPPPXXXX 713
+PP PPP P P P PP P PP P PPP
Sbjct: 731 SPPPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPP---------PGVAGAGPPP---P 778
Query: 714 PPKPPFLS 737
PP PP +S
Sbjct: 779 PPPPPAVS 786
Score = 28.3 bits (60), Expect = 1.5
Identities = 15/35 (42%), Positives = 15/35 (42%), Gaps = 5/35 (14%)
Frame = +1
Query: 541 PPXXPPPXXPPPPXP---XPPPPXXXP--RXPGPP 630
P P P PPP P PPPP P GPP
Sbjct: 742 PTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPP 776
Score = 26.6 bits (56), Expect = 4.7
Identities = 14/45 (31%), Positives = 17/45 (37%)
Frame = +1
Query: 745 SXAPHXPPSGXPLXPPKXXPLPPXXPPPPXXXPXPPXPAXRPPPP 879
S +P P + + L PPPP P PA P PP
Sbjct: 709 SPSPLLPDVSDTVEEQQKLLLKSPPPPPPAVIVPTPAPAPIPVPP 753
>SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 309
Score = 33.5 bits (73), Expect = 0.041
Identities = 19/47 (40%), Positives = 21/47 (44%)
Frame = +1
Query: 739 PXSXAPHXPPSGXPLXPPKXXPLPPXXPPPPXXXPXPPXPAXRPPPP 879
P + AP P S L PP P P PPP PP P+ PP P
Sbjct: 125 PSAPAPPTPQS--ELRPPTSAPPRPSIPPPSPASA-PPIPSKAPPIP 168
Score = 32.7 bits (71), Expect = 0.071
Identities = 18/45 (40%), Positives = 19/45 (42%)
Frame = +1
Query: 745 SXAPHXPPSGXPLXPPKXXPLPPXXPPPPXXXPXPPXPAXRPPPP 879
S A PPS P+ PP PP P PP PA PP P
Sbjct: 118 SSASAAPPSAPAPPTPQSELRPPTSAPPRPSIP-PPSPASAPPIP 161
Score = 31.9 bits (69), Expect = 0.12
Identities = 13/29 (44%), Positives = 13/29 (44%)
Frame = +2
Query: 536 PXPPXPPPXXXXXPPXPXPPPPXXSXGPP 622
P P PPP PP P PP S PP
Sbjct: 145 PRPSIPPPSPASAPPIPSKAPPIPSSLPP 173
Score = 31.9 bits (69), Expect(2) = 0.001
Identities = 14/40 (35%), Positives = 16/40 (40%)
Frame = +1
Query: 751 APHXPPSGXPLXPPKXXPLPPXXPPPPXXXPXPPXPAXRP 870
AP P P P P+PP PPPP + RP
Sbjct: 179 APVKSPPSAPSLPSAVPPMPPKVPPPPLSQAPVANTSSRP 218
Score = 31.5 bits (68), Expect = 0.16
Identities = 15/38 (39%), Positives = 17/38 (44%)
Frame = +1
Query: 763 PPSGXPLXPPKXXPLPPXXPPPPXXXPXPPXPAXRPPP 876
PP+ P P P P PP P PP P+ PPP
Sbjct: 139 PPTSAPPRPSIPPPSPASAPPIP--SKAPPIPSSLPPP 174
Score = 31.5 bits (68), Expect = 0.16
Identities = 14/38 (36%), Positives = 15/38 (39%)
Frame = +1
Query: 739 PXSXAPHXPPSGXPLXPPKXXPLPPXXPPPPXXXPXPP 852
P S P P+ PP LP PP P P PP
Sbjct: 168 PSSLPPPAQPAAPVKSPPSAPSLPSAVPPMPPKVPPPP 205
Score = 30.7 bits (66), Expect = 0.29
Identities = 20/61 (32%), Positives = 22/61 (36%), Gaps = 14/61 (22%)
Frame = +1
Query: 739 PXSXAPHXPPSGXPLXPPKXXPLPPXXPPP-----PXXXP---------XPPXPAXRPPP 876
P P P+ P P K P+P PPP P P PP P PPP
Sbjct: 145 PRPSIPPPSPASAPPIPSKAPPIPSSLPPPAQPAAPVKSPPSAPSLPSAVPPMPPKVPPP 204
Query: 877 P 879
P
Sbjct: 205 P 205
Score = 30.3 bits (65), Expect = 0.38
Identities = 12/29 (41%), Positives = 12/29 (41%)
Frame = +2
Query: 542 PPXPPPXXXXXPPXPXPPPPXXSXGPPXP 628
P PP PP P PP S PP P
Sbjct: 140 PTSAPPRPSIPPPSPASAPPIPSKAPPIP 168
Score = 28.3 bits (60), Expect = 1.5
Identities = 26/86 (30%), Positives = 28/86 (32%), Gaps = 2/86 (2%)
Frame = +2
Query: 536 PXPPXPP-PXXXXXPPXPXPPPPXXSXGPPXPPXXEAQLAXXXXXXXXXXXSXPPPXXKX 712
P P PP P PP PP P S PP P A S PPP
Sbjct: 125 PSAPAPPTPQSELRPPTSAPPRP--SIPPPSP----ASAPPIPSKAPPIPSSLPPPAQPA 178
Query: 713 A-XKTPLSFXXXXXXXTXXPREXPSP 787
A K+P S P + P P
Sbjct: 179 APVKSPPSAPSLPSAVPPMPPKVPPP 204
Score = 27.1 bits (57), Expect = 3.5
Identities = 18/52 (34%), Positives = 22/52 (42%), Gaps = 5/52 (9%)
Frame = +1
Query: 736 RPXSXAPHXPPSGXPLXPPKX---XPLPPXXPPPPXXXPXPPXPA--XRPPP 876
RP + AP P + PP P+P PP P P P PA + PP
Sbjct: 138 RPPTSAPPRPS----IPPPSPASAPPIPSKAPPIPSSLPPPAQPAAPVKSPP 185
Score = 25.8 bits (54), Expect = 8.1
Identities = 9/18 (50%), Positives = 9/18 (50%)
Frame = +1
Query: 568 PPPPXPXPPPPXXXPRXP 621
PPPP P P P P P
Sbjct: 5 PPPPPPAPAPAAAAPAPP 22
Score = 25.8 bits (54), Expect(2) = 0.001
Identities = 12/28 (42%), Positives = 12/28 (42%), Gaps = 2/28 (7%)
Frame = +1
Query: 553 PPPXXPPPPXPXPPPPXXXPRXP--GPP 630
PP PP P PP P P P PP
Sbjct: 139 PPTSAPPRPSIPPPSPASAPPIPSKAPP 166
>SPBC20F10.01 |gar1|SPBC25H2.01c|snoRNP pseudouridylase complex
protein Gar1 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 194
Score = 37.9 bits (84), Expect = 0.002
Identities = 26/65 (40%), Positives = 28/65 (43%), Gaps = 2/65 (3%)
Frame = -2
Query: 878 GGGGRXAGXGGXGXXXGG-GGXXGG-KGXXLGGXRGXPEGGXWGAXEXGRKKGGFWXPXX 705
G AG GG G GG GG GG G GG G GG +G G +GGF
Sbjct: 129 GARNGPAGRGGRGGFRGGRGGSRGGFGGNSRGGFGGGSRGG-FGGGSRGGSRGGFRGGSR 187
Query: 704 GGGGG 690
GG G
Sbjct: 188 GGFRG 192
Score = 33.9 bits (74), Expect = 0.031
Identities = 23/64 (35%), Positives = 25/64 (39%)
Frame = -2
Query: 869 GRXAGXGGXGXXXGGGGXXGGKGXXLGGXRGXPEGGXWGAXEXGRKKGGFWXPXXGGGGG 690
G G G G G GG GG+G GG G GG G +GGF GG G
Sbjct: 129 GARNGPAGRG---GRGGFRGGRGGSRGGFGGNSRGGFGGG-----SRGGFGGGSRGGSRG 180
Query: 689 XXSG 678
G
Sbjct: 181 GFRG 184
Score = 31.9 bits (69), Expect = 0.12
Identities = 14/30 (46%), Positives = 14/30 (46%)
Frame = -3
Query: 631 GGXRGXXGXXGGGGXGGGGXXXXXGGGXGG 542
GG RG G GG GGG GG GG
Sbjct: 148 GGSRGGFGGNSRGGFGGGSRGGFGGGSRGG 177
Score = 29.1 bits (62), Expect = 0.87
Identities = 15/34 (44%), Positives = 15/34 (44%), Gaps = 2/34 (5%)
Frame = -3
Query: 631 GGXRGXXGXXGG--GGXGGGGXXXXXGGGXGGVG 536
GG G G GG GG GG GG GG G
Sbjct: 138 GGRGGFRGGRGGSRGGFGGNSRGGFGGGSRGGFG 171
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 37.5 bits (83), Expect = 0.002
Identities = 29/114 (25%), Positives = 31/114 (27%), Gaps = 2/114 (1%)
Frame = +1
Query: 544 PXXPPPXXPPPPXPXPP--PPXXXPRXPGPPXXXXXXXXXXXXXXXXPXFXXXXXXXXXX 717
P P P PP P P PP P PP P
Sbjct: 1121 PPVPKPSVAAPPVPVPSGAPPVPKPSVAAPPVPAPSGAPPVPK----PSVAAPPVPAPSS 1176
Query: 718 XXXXFFRPXSXAPHXPPSGXPLXPPKXXPLPPXXPPPPXXXPXPPXPAXRPPPP 879
+P + P PP PK P PPP P P A PP P
Sbjct: 1177 GIPPVPKPAAGVPPVPPPSEAPPVPKPSVGVPPVPPPSTAPPVPTPSAGLPPVP 1230
Score = 33.5 bits (73), Expect = 0.041
Identities = 26/113 (23%), Positives = 29/113 (25%)
Frame = +1
Query: 541 PPXXPPPXXPPPPXPXPPPPXXXPRXPGPPXXXXXXXXXXXXXXXXPXFXXXXXXXXXXX 720
PP P PP P P PP G P P
Sbjct: 1032 PPIPVPSTAPPVPIPTSTPPVPKSSS-GAPSAPPPVPAPSSEIPSIPAPSGAPPVPAPSG 1090
Query: 721 XXXFFRPXSXAPHXPPSGXPLXPPKXXPLPPXXPPPPXXXPXPPXPAXRPPPP 879
+P AP P + P P P P P P P+ PP P
Sbjct: 1091 IPPVPKPSVAAPPVPKPSVAVPPVPAPSGAPPVPKPSVAAPPVPVPSGAPPVP 1143
Score = 33.1 bits (72), Expect = 0.054
Identities = 31/124 (25%), Positives = 33/124 (26%), Gaps = 9/124 (7%)
Frame = +1
Query: 535 TXPPXXPPPXXPPPPX-----PXPPPPXXXPRXPGPPXXXXXXXXXXXXXXXXPXFXXXX 699
T PP P PP P P PPP P P P
Sbjct: 1039 TAPPVPIPTSTPPVPKSSSGAPSAPPPVPAPSSEIPSIPAPSGAPPVPAPSGIPPVPKPS 1098
Query: 700 XXXXXXXXXXFFRPXSXAPHX-PPSGXPLXPPKXXPLPPXXPP---PPXXXPXPPXPAXR 867
P AP PP P P+P PP P P P P+
Sbjct: 1099 VAAPPVPKPSVAVPPVPAPSGAPPVPKPSVAAPPVPVPSGAPPVPKPSVAAPPVPAPSGA 1158
Query: 868 PPPP 879
PP P
Sbjct: 1159 PPVP 1162
Score = 29.9 bits (64), Expect = 0.50
Identities = 16/48 (33%), Positives = 20/48 (41%)
Frame = +1
Query: 736 RPXSXAPHXPPSGXPLXPPKXXPLPPXXPPPPXXXPXPPXPAXRPPPP 879
+P S +P P + P P PP P P P P P+ PP P
Sbjct: 998 KPVSTSPAAPLARVPPVPKLSSKAPPV-PLPSADAPPIPVPSTAPPVP 1044
Score = 29.9 bits (64), Expect = 0.50
Identities = 27/112 (24%), Positives = 30/112 (26%), Gaps = 1/112 (0%)
Frame = +3
Query: 543 PPXPPPXXXXXPPPPXPPPPXXPXXPRXPP*XRPNWXXXXXXXXXXR-XRXPPPXXXXPP 719
PP P P P P P P PP +P+ P P PP
Sbjct: 1131 PPVPVPSGAPPVPKPSVAAPPVPAPSGAPPVPKPSVAAPPVPAPSSGIPPVPKPAAGVPP 1190
Query: 720 KPPFLSXXLGRXXXXXXXXXXXPXQXXTFTTPXXPPPXXXPXPPXPRXPXPP 875
PP P + P PPP P P P PP
Sbjct: 1191 VPP--------------PSEAPPVPKPSVGVPPVPPPSTAPPVPTPSAGLPP 1228
Score = 29.9 bits (64), Expect = 0.50
Identities = 14/32 (43%), Positives = 14/32 (43%), Gaps = 3/32 (9%)
Frame = +2
Query: 542 PPXPPPXXXXXPPXPX---PPPPXXSXGPPXP 628
PP PPP P P PP P S PP P
Sbjct: 1189 PPVPPPSEAPPVPKPSVGVPPVPPPSTAPPVP 1220
Score = 29.5 bits (63), Expect = 0.66
Identities = 23/111 (20%), Positives = 27/111 (24%)
Frame = +3
Query: 543 PPXPPPXXXXXPPPPXPPPPXXPXXPRXPP*XRPNWXXXXXXXXXXRXRXPPPXXXXPPK 722
PP P P P P P P PP + + P P
Sbjct: 1022 PPVPLPSADAPPIPVPSTAPPVPIPTSTPPVPKSSSGAPSAPPPVPAPSSEIPSIPAPSG 1081
Query: 723 PPFLSXXLGRXXXXXXXXXXXPXQXXTFTTPXXPPPXXXPXPPXPRXPXPP 875
P + G P + P P P P P P PP
Sbjct: 1082 APPVPAPSGIPPVPKPSVAAPPVPKPSVAVPPVPAPSGAPPVPKPSVAAPP 1132
Score = 29.5 bits (63), Expect = 0.66
Identities = 27/111 (24%), Positives = 28/111 (25%)
Frame = +1
Query: 541 PPXXPPPXXPPPPXPXPPPPXXXPRXPGPPXXXXXXXXXXXXXXXXPXFXXXXXXXXXXX 720
P P PP P P PP P PP P
Sbjct: 1141 PVPKPSVAAPPVPAPSGAPPVPKPSVAAPP---VPAPSSGIPPVPKPAAGVPPVPPPSEA 1197
Query: 721 XXXFFRPXSXAPHXPPSGXPLXPPKXXPLPPXXPPPPXXXPXPPXPAXRPP 873
P PPS P P LPP P P P P P+ P
Sbjct: 1198 PPVPKPSVGVPPVPPPSTAPPVPTPSAGLPP-VPVPTAKAPPVPAPSSEAP 1247
Score = 28.3 bits (60), Expect = 1.5
Identities = 17/39 (43%), Positives = 18/39 (46%), Gaps = 5/39 (12%)
Frame = +2
Query: 542 PPXPPPXXXXXP-PXPX---PPPPXXSXG-PPXPPXXEA 643
PP P P P P P PP P + G PP PP EA
Sbjct: 1159 PPVPKPSVAAPPVPAPSSGIPPVPKPAAGVPPVPPPSEA 1197
Score = 28.3 bits (60), Expect = 1.5
Identities = 16/38 (42%), Positives = 16/38 (42%), Gaps = 4/38 (10%)
Frame = +2
Query: 542 PPXPPPXXXXXP---PXPXPPPPXXSXG-PPXPPXXEA 643
PP P P P P PP P S G PP PP A
Sbjct: 1179 PPVPKPAAGVPPVPPPSEAPPVPKPSVGVPPVPPPSTA 1216
Score = 27.1 bits (57), Expect = 3.5
Identities = 15/44 (34%), Positives = 16/44 (36%), Gaps = 5/44 (11%)
Frame = +1
Query: 763 PPSGXPLXPPKXXPLPPXXPPPPXXXPXPPXP-----AXRPPPP 879
PP P P+P PP P PP P A PPP
Sbjct: 1022 PPVPLPSADAPPIPVPSTAPPVPIPTSTPPVPKSSSGAPSAPPP 1065
>SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit
Spp42|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2363
Score = 34.7 bits (76), Expect = 0.018
Identities = 12/20 (60%), Positives = 12/20 (60%)
Frame = +1
Query: 541 PPXXPPPXXPPPPXPXPPPP 600
PP PPP PP P PPPP
Sbjct: 10 PPPPPPPGFEPPSQPPPPPP 29
Score = 33.9 bits (74), Expect = 0.031
Identities = 13/25 (52%), Positives = 14/25 (56%)
Frame = +1
Query: 805 LPPXXPPPPXXXPXPPXPAXRPPPP 879
LPP PPPP P P+ PPPP
Sbjct: 4 LPPGNPPPPPPPPGFEPPSQPPPPP 28
Score = 33.9 bits (74), Expect = 0.031
Identities = 12/22 (54%), Positives = 12/22 (54%)
Frame = +3
Query: 537 PTPPXPPPXXXXXPPPPXPPPP 602
P PP PPP PP PPPP
Sbjct: 9 PPPPPPPPGFEPPSQPPPPPPP 30
Score = 32.3 bits (70), Expect = 0.094
Identities = 13/27 (48%), Positives = 15/27 (55%), Gaps = 3/27 (11%)
Frame = +1
Query: 529 LXTXPPXXPPPXXPPP---PXPXPPPP 600
+ + PP PPP PPP P PPPP
Sbjct: 1 MASLPPGNPPPPPPPPGFEPPSQPPPP 27
Score = 31.9 bits (69), Expect = 0.12
Identities = 12/25 (48%), Positives = 12/25 (48%)
Frame = +3
Query: 537 PTPPXPPPXXXXXPPPPXPPPPXXP 611
P P PPP PP PPPP P
Sbjct: 6 PGNPPPPPPPPGFEPPSQPPPPPPP 30
Score = 30.7 bits (66), Expect = 0.29
Identities = 13/25 (52%), Positives = 13/25 (52%)
Frame = +1
Query: 556 PPXXPPPPXPXPPPPXXXPRXPGPP 630
PP PPP P PPP P P PP
Sbjct: 5 PPGNPPP--PPPPPGFEPPSQPPPP 27
Score = 29.5 bits (63), Expect = 0.66
Identities = 12/27 (44%), Positives = 12/27 (44%)
Frame = +1
Query: 544 PXXPPPXXPPPPXPXPPPPXXXPRXPG 624
P PP PPPP PP P PG
Sbjct: 5 PPGNPPPPPPPPGFEPPSQPPPPPPPG 31
Score = 28.3 bits (60), Expect = 1.5
Identities = 11/23 (47%), Positives = 11/23 (47%)
Frame = +1
Query: 763 PPSGXPLXPPKXXPLPPXXPPPP 831
PP P PP PP PPPP
Sbjct: 5 PPGNPPPPPPPPGFEPPSQPPPP 27
Score = 27.5 bits (58), Expect = 2.7
Identities = 13/29 (44%), Positives = 13/29 (44%)
Frame = +3
Query: 543 PPXPPPXXXXXPPPPXPPPPXXPXXPRXP 629
PP PP PPPP PP P P P
Sbjct: 5 PPGNPPPP---PPPPGFEPPSQPPPPPPP 30
Score = 27.5 bits (58), Expect = 2.7
Identities = 11/25 (44%), Positives = 11/25 (44%)
Frame = +1
Query: 802 PLPPXXPPPPXXXPXPPXPAXRPPP 876
P P PPPP P P PPP
Sbjct: 6 PGNPPPPPPPPGFEPPSQPPPPPPP 30
Score = 27.5 bits (58), Expect = 2.7
Identities = 10/24 (41%), Positives = 12/24 (50%)
Frame = +3
Query: 579 PPPXPPPPXXPXXPRXPP*XRPNW 650
PPP PPPP + PP P +
Sbjct: 9 PPPPPPPPGFEPPSQPPPPPPPGY 32
Score = 26.6 bits (56), Expect = 4.7
Identities = 10/19 (52%), Positives = 10/19 (52%)
Frame = +3
Query: 576 PPPPXPPPPXXPXXPRXPP 632
PPPP PP P P PP
Sbjct: 10 PPPPPPPGFEPPSQPPPPP 28
>SPAC140.02 |gar2||GAR family|Schizosaccharomyces pombe|chr
1|||Manual
Length = 500
Score = 31.5 bits (68), Expect = 0.16
Identities = 18/38 (47%), Positives = 19/38 (50%)
Frame = -2
Query: 875 GGGRXAGXGGXGXXXGGGGXXGGKGXXLGGXRGXPEGG 762
GGG G GG G G G GG+G GG RG GG
Sbjct: 446 GGGSRGGRGGFG----GRGGFGGRGG-FGGGRGRGRGG 478
Score = 28.3 bits (60), Expect = 1.5
Identities = 17/40 (42%), Positives = 18/40 (45%), Gaps = 1/40 (2%)
Frame = -2
Query: 878 GGGGRXAGXGGXGXXXG-GGGXXGGKGXXLGGXRGXPEGG 762
GG G G GG G G GGG G+G G G P G
Sbjct: 451 GGRGGFGGRGGFGGRGGFGGGRGRGRG---GARSGNPNRG 487
Score = 26.2 bits (55), Expect = 6.1
Identities = 15/35 (42%), Positives = 18/35 (51%)
Frame = -2
Query: 827 GGGXXGGKGXXLGGXRGXPEGGXWGAXEXGRKKGG 723
GGG GG+G GG G G +G GR +GG
Sbjct: 446 GGGSRGGRG-GFGGRGGFGGRGGFGGGR-GRGRGG 478
>SPAC1F5.04c |cdc12||formin Cdc12|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1841
Score = 26.2 bits (55), Expect(2) = 0.19
Identities = 8/9 (88%), Positives = 8/9 (88%)
Frame = +3
Query: 576 PPPPXPPPP 602
PPPP PPPP
Sbjct: 945 PPPPPPPPP 953
Score = 23.4 bits (48), Expect(2) = 0.19
Identities = 7/9 (77%), Positives = 8/9 (88%)
Frame = +3
Query: 534 YPTPPXPPP 560
+PTPP PPP
Sbjct: 904 HPTPPPPPP 912
>SPCC830.07c |psi1|psi|DNAJ domain protein Psi1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 379
Score = 29.5 bits (63), Expect = 0.66
Identities = 19/49 (38%), Positives = 21/49 (42%), Gaps = 2/49 (4%)
Frame = -2
Query: 830 GGGGXXGGKGXXLGGXRGXPE--GGXWGAXEXGRKKGGFWXPXXGGGGG 690
GGGG GG G +GG + GG G GGF GGG G
Sbjct: 135 GGGGMGGGMGG-MGGMDDDMDMDGGFGTRTRGGGMPGGFANMFGGGGAG 182
>SPAC2F3.14c |||conserved fungal protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 331
Score = 29.1 bits (62), Expect = 0.87
Identities = 16/46 (34%), Positives = 16/46 (34%)
Frame = +1
Query: 739 PXSXAPHXPPSGXPLXPPKXXPLPPXXPPPPXXXPXPPXPAXRPPP 876
P P PP P P PLP P P P P P P P
Sbjct: 99 PEEPLPREPP--LPNEPVPEEPLPGEPPLPDEPVPEEPLPGEPPLP 142
>SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1420
Score = 29.1 bits (62), Expect = 0.87
Identities = 11/24 (45%), Positives = 11/24 (45%)
Frame = +1
Query: 541 PPXXPPPXXPPPPXPXPPPPXXXP 612
PP P P P P PPPP P
Sbjct: 224 PPTYTPKQADPLPAPPPPPPPTLP 247
Score = 28.7 bits (61), Expect = 1.2
Identities = 22/107 (20%), Positives = 28/107 (26%)
Frame = +1
Query: 559 PXXPPPPXPXPPPPXXXPRXPGPPXXXXXXXXXXXXXXXXPXFXXXXXXXXXXXXXXFFR 738
P P PPP P P P +
Sbjct: 156 PTVSAPNSMVSPPPSFQPPSAAAPATSLPSDYNPPPPPPPPPAVEDQAADANEPDDYYSS 215
Query: 739 PXSXAPHXPPSGXPLXPPKXXPLPPXXPPPPXXXPXPPXPAXRPPPP 879
+ +P PP+ P + PLP PPPP P + P P
Sbjct: 216 GRAVSPEIPPT---YTPKQADPLPAPPPPPPPTLPPQSTNTSQLPMP 259
Score = 26.2 bits (55), Expect = 6.1
Identities = 8/9 (88%), Positives = 8/9 (88%)
Frame = +3
Query: 576 PPPPXPPPP 602
PPPP PPPP
Sbjct: 189 PPPPPPPPP 197
Score = 26.2 bits (55), Expect = 6.1
Identities = 10/25 (40%), Positives = 11/25 (44%)
Frame = +1
Query: 541 PPXXPPPXXPPPPXPXPPPPXXXPR 615
P P P P P PPPP P+
Sbjct: 225 PTYTPKQADPLPAPPPPPPPTLPPQ 249
Score = 26.2 bits (55), Expect = 6.1
Identities = 17/63 (26%), Positives = 19/63 (30%)
Frame = +3
Query: 540 TPPXPPPXXXXXPPPPXPPPPXXPXXPRXPP*XRPNWXXXXXXXXXXRXRXPPPXXXXPP 719
TP P PPPP PP + P R PP PP
Sbjct: 228 TPKQADPLPAPPPPPPPTLPPQSTNTSQLPMPSR----NVNNLGSQVNIPPPPATPSQPP 283
Query: 720 KPP 728
+PP
Sbjct: 284 RPP 286
>SPBC83.01 |ucp8||UBA/EH/EF hand domain protein
Ucp8|Schizosaccharomyces pombe|chr 2|||Manual
Length = 884
Score = 28.3 bits (60), Expect = 1.5
Identities = 13/32 (40%), Positives = 13/32 (40%)
Frame = +3
Query: 537 PTPPXPPPXXXXXPPPPXPPPPXXPXXPRXPP 632
P PP P P PP PPP P PP
Sbjct: 729 PAPPTPAPTPAVKHHPP-PPPVRSSISPSMPP 759
Score = 27.1 bits (57), Expect = 3.5
Identities = 11/30 (36%), Positives = 12/30 (40%)
Frame = +1
Query: 778 PLXPPKXXPLPPXXPPPPXXXPXPPXPAXR 867
P P+ P PP P P PP P R
Sbjct: 721 PAIKPQVTPAPPTPAPTPAVKHHPPPPPVR 750
Score = 25.8 bits (54), Expect = 8.1
Identities = 10/24 (41%), Positives = 10/24 (41%)
Frame = +1
Query: 808 PPXXPPPPXXXPXPPXPAXRPPPP 879
P P PP P P PPPP
Sbjct: 725 PQVTPAPPTPAPTPAVKHHPPPPP 748
Score = 25.8 bits (54), Expect = 8.1
Identities = 11/31 (35%), Positives = 11/31 (35%)
Frame = +3
Query: 537 PTPPXPPPXXXXXPPPPXPPPPXXPXXPRXP 629
P P P P PPPP P P P
Sbjct: 731 PPTPAPTPAVKHHPPPPPVRSSISPSMPPAP 761
>SPAC19G12.10c |cpy1|pcy1|vacuolar carboxypeptidase
Y|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1002
Score = 27.9 bits (59), Expect = 2.0
Identities = 15/44 (34%), Positives = 16/44 (36%), Gaps = 3/44 (6%)
Frame = +1
Query: 757 HXPPSGXPLXPPKXXPLPPXXPPPPXXXPXPP---XPAXRPPPP 879
H PP P + P PP P P PP P PPP
Sbjct: 206 HMPPPPMHHKPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPP 249
Score = 27.9 bits (59), Expect = 2.0
Identities = 15/44 (34%), Positives = 16/44 (36%), Gaps = 3/44 (6%)
Frame = +1
Query: 757 HXPPSGXPLXPPKXXPLPPXXPPPPXXXPXPP---XPAXRPPPP 879
H PP P + P PP P P PP P PPP
Sbjct: 219 HMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPP 262
Score = 27.9 bits (59), Expect = 2.0
Identities = 15/44 (34%), Positives = 16/44 (36%), Gaps = 3/44 (6%)
Frame = +1
Query: 757 HXPPSGXPLXPPKXXPLPPXXPPPPXXXPXPP---XPAXRPPPP 879
H PP P + P PP P P PP P PPP
Sbjct: 232 HMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPP 275
Score = 27.9 bits (59), Expect = 2.0
Identities = 15/44 (34%), Positives = 16/44 (36%), Gaps = 3/44 (6%)
Frame = +1
Query: 757 HXPPSGXPLXPPKXXPLPPXXPPPPXXXPXPP---XPAXRPPPP 879
H PP P + P PP P P PP P PPP
Sbjct: 245 HMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPP 288
Score = 27.9 bits (59), Expect = 2.0
Identities = 15/44 (34%), Positives = 16/44 (36%), Gaps = 3/44 (6%)
Frame = +1
Query: 757 HXPPSGXPLXPPKXXPLPPXXPPPPXXXPXPP---XPAXRPPPP 879
H PP P + P PP P P PP P PPP
Sbjct: 258 HMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPP 301
Score = 27.9 bits (59), Expect = 2.0
Identities = 15/44 (34%), Positives = 16/44 (36%), Gaps = 3/44 (6%)
Frame = +1
Query: 757 HXPPSGXPLXPPKXXPLPPXXPPPPXXXPXPP---XPAXRPPPP 879
H PP P + P PP P P PP P PPP
Sbjct: 271 HMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPP 314
Score = 27.9 bits (59), Expect = 2.0
Identities = 15/44 (34%), Positives = 16/44 (36%), Gaps = 3/44 (6%)
Frame = +1
Query: 757 HXPPSGXPLXPPKXXPLPPXXPPPPXXXPXPP---XPAXRPPPP 879
H PP P + P PP P P PP P PPP
Sbjct: 284 HMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPP 327
Score = 27.9 bits (59), Expect = 2.0
Identities = 15/44 (34%), Positives = 16/44 (36%), Gaps = 3/44 (6%)
Frame = +1
Query: 757 HXPPSGXPLXPPKXXPLPPXXPPPPXXXPXPP---XPAXRPPPP 879
H PP P + P PP P P PP P PPP
Sbjct: 297 HMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPP 340
>SPAC26A3.16 |dph1|ucp5|UBA domain protein Dph1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 354
Score = 27.5 bits (58), Expect = 2.7
Identities = 11/21 (52%), Positives = 11/21 (52%)
Frame = -3
Query: 598 GGGXGGGGXXXXXGGGXGGVG 536
GGG GG G G G GG G
Sbjct: 225 GGGLGGAGLGGLGGAGLGGFG 245
>SPAPJ760.02c |app1||App1 protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 857
Score = 27.5 bits (58), Expect = 2.7
Identities = 25/111 (22%), Positives = 26/111 (23%), Gaps = 1/111 (0%)
Frame = +3
Query: 546 PXPPPXXXXXPPPPXPPPPXXPXXPRXPP*XRPNWXXXXXXXXXXRXRXPPPXXXXPPKP 725
P PP P P PP P P P +P R P P
Sbjct: 575 PQPPVAPVAPEVPSVPQPPVAPVVPEAPSVPQPPVAPVAPEVPSVPQRPAVPVVPEAPSV 634
Query: 726 PFLSXXLGRXXXXXXXXXXXPXQXXTFTTPXXPPPXXXP-XPPXPRXPXPP 875
P P P P P P P P P PP
Sbjct: 635 P--QPPAAPVVPEVPSVPQRPAVPVVPEAPSVPQPPAAPVVPEVPSVPQPP 683
Score = 27.5 bits (58), Expect = 2.7
Identities = 11/31 (35%), Positives = 12/31 (38%)
Frame = +3
Query: 537 PTPPXPPPXXXXXPPPPXPPPPXXPXXPRXP 629
P+ P PP P P PP P P P
Sbjct: 587 PSVPQPPVAPVVPEAPSVPQPPVAPVAPEVP 617
>SPCC962.06c |bpb1|sf1|zinc finger protein Bpb1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 587
Score = 27.5 bits (58), Expect = 2.7
Identities = 16/49 (32%), Positives = 18/49 (36%), Gaps = 2/49 (4%)
Frame = +1
Query: 739 PXSXAPHXPPSGXPLXPPKXXPLPPXXPPPPXXXPXPPXPAXRPP--PP 879
P AP P + PL P P PP P P +PP PP
Sbjct: 479 PSQNAPFIPGTSAPLPPTTFAPPGVPLPPIPGAPGMPNLNMSQPPMVPP 527
Score = 25.8 bits (54), Expect = 8.1
Identities = 14/37 (37%), Positives = 15/37 (40%), Gaps = 1/37 (2%)
Frame = +1
Query: 523 NXLXTXPPXXPPPXXPPPPXPXP-PPPXXXPRXPGPP 630
N + PP PP PP P P P P PG P
Sbjct: 516 NLNMSQPPMVPPGMALPPGMPAPFPGYPAVPAMPGIP 552
>SPCC18.14c |rpp0||60S acidic ribosomal protein Rpp0
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 312
Score = 27.1 bits (57), Expect = 3.5
Identities = 10/11 (90%), Positives = 11/11 (100%)
Frame = +1
Query: 409 SDDDMGFGLFD 441
SD+DMGFGLFD
Sbjct: 302 SDEDMGFGLFD 312
>SPBP8B7.06 |rpp201|rpp2, rpp2-1|60S acidic ribosomal protein P2A
subunit|Schizosaccharomyces pombe|chr 2|||Manual
Length = 110
Score = 27.1 bits (57), Expect = 3.5
Identities = 10/11 (90%), Positives = 11/11 (100%)
Frame = +1
Query: 409 SDDDMGFGLFD 441
SD+DMGFGLFD
Sbjct: 100 SDEDMGFGLFD 110
>SPBC23G7.15c |rpp202|rpp2-2|60S acidic ribosomal protein P2B
subunit|Schizosaccharomyces pombe|chr 2|||Manual
Length = 110
Score = 27.1 bits (57), Expect = 3.5
Identities = 10/11 (90%), Positives = 11/11 (100%)
Frame = +1
Query: 409 SDDDMGFGLFD 441
SD+DMGFGLFD
Sbjct: 100 SDEDMGFGLFD 110
>SPAC1071.08 |rpp203|rpp2-3, rla6|60S acidic ribosomal protein P2C
subunit|Schizosaccharomyces pombe|chr 1|||Manual
Length = 110
Score = 27.1 bits (57), Expect = 3.5
Identities = 10/11 (90%), Positives = 11/11 (100%)
Frame = +1
Query: 409 SDDDMGFGLFD 441
SD+DMGFGLFD
Sbjct: 100 SDEDMGFGLFD 110
>SPBC557.04 |ppk29||Ark1/Prk1 family protein kinase
Ppk29|Schizosaccharomyces pombe|chr 2|||Manual
Length = 872
Score = 26.6 bits (56), Expect = 4.7
Identities = 10/21 (47%), Positives = 10/21 (47%)
Frame = +1
Query: 568 PPPPXPXPPPPXXXPRXPGPP 630
PPPP P P P P P P
Sbjct: 356 PPPPPPMPAPIYNVPNVPTVP 376
>SPAC22F3.05c |alp41||ADP-ribosylation factor
Alp41|Schizosaccharomyces pombe|chr 1|||Manual
Length = 186
Score = 26.6 bits (56), Expect = 4.7
Identities = 21/69 (30%), Positives = 35/69 (50%), Gaps = 3/69 (4%)
Frame = +1
Query: 91 RSKLKMVSKAELACVYSALILVD-DDV--AVTGEKISTILKAAAVDVEPYWPGLFAKALE 261
R+ L+ + E S L+L + DV A++ E+IS IL + +W AL
Sbjct: 103 RNTLQELLVEEKLLFTSILVLANKSDVSGALSSEEISKILNISKYK-SSHWRIFSVSALT 161
Query: 262 GINVRDLIT 288
G+N++D I+
Sbjct: 162 GLNIKDAIS 170
>SPACUNK4.07c |cta4|sev4, SPAPYUK71.01|P-type ATPase, calcium
transporting Cta4 |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1211
Score = 26.6 bits (56), Expect = 4.7
Identities = 10/20 (50%), Positives = 10/20 (50%)
Frame = +3
Query: 537 PTPPXPPPXXXXXPPPPXPP 596
PTPP PP PP P P
Sbjct: 878 PTPPVPPALCHAFPPGPNNP 897
>SPAC20G4.02c |fus1||formin Fus1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1372
Score = 26.2 bits (55), Expect = 6.1
Identities = 10/20 (50%), Positives = 10/20 (50%)
Frame = +1
Query: 772 GXPLXPPKXXPLPPXXPPPP 831
G P P PLPP PP P
Sbjct: 800 GNPFKAPPPAPLPPPAPPLP 819
Score = 25.8 bits (54), Expect = 8.1
Identities = 9/18 (50%), Positives = 9/18 (50%)
Frame = +1
Query: 559 PXXPPPPXPXPPPPXXXP 612
P PPP P PPP P
Sbjct: 802 PFKAPPPAPLPPPAPPLP 819
>SPCC306.09c |cap1|cap|adenylyl cyclase-associated protein
Cap1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 551
Score = 26.2 bits (55), Expect = 6.1
Identities = 8/9 (88%), Positives = 8/9 (88%)
Frame = +3
Query: 576 PPPPXPPPP 602
PPPP PPPP
Sbjct: 306 PPPPPPPPP 314
>SPBC8D2.20c |sec31||COPII-coated vesicle component Sec31
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1224
Score = 26.2 bits (55), Expect = 6.1
Identities = 15/44 (34%), Positives = 15/44 (34%)
Frame = +1
Query: 745 SXAPHXPPSGXPLXPPKXXPLPPXXPPPPXXXPXPPXPAXRPPP 876
S P PP L PP P PPP P A PP
Sbjct: 1049 SVTPQLPPVSSRL-PPVSATRPQIPQPPPVSTALPSSSAVSRPP 1091
>SPCP1E11.02 |ppk38||Ark1/Prk1 family protein kinase
Ppk38|Schizosaccharomyces pombe|chr 3|||Manual
Length = 650
Score = 25.8 bits (54), Expect = 8.1
Identities = 11/28 (39%), Positives = 11/28 (39%)
Frame = +3
Query: 540 TPPXPPPXXXXXPPPPXPPPPXXPXXPR 623
T PP PPP P P P PR
Sbjct: 416 TQGAPPSHTYGPPPPVQPKPKISPTTPR 443
>SPAC31G5.01 |sap49|SPAPB1A11.05|RNA-binding protein
Sap49|Schizosaccharomyces pombe|chr 1|||Manual
Length = 335
Score = 25.8 bits (54), Expect = 8.1
Identities = 17/51 (33%), Positives = 19/51 (37%), Gaps = 5/51 (9%)
Frame = +1
Query: 739 PXSXAPHXPPSGXPLXPPKXXPLPPXX-----PPPPXXXPXPPXPAXRPPP 876
P + A H P G P P P+ P PPPP P PA P
Sbjct: 261 PFTAAQHFP--GMPAMPMMNVPMGPGGAPLVPPPPPGMVMASPSPAAATIP 309
>SPBC13E7.03c |||RNA hairpin binding protein |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 713
Score = 25.8 bits (54), Expect = 8.1
Identities = 9/19 (47%), Positives = 10/19 (52%)
Frame = +3
Query: 576 PPPPXPPPPXXPXXPRXPP 632
PPPP PPP P+ P
Sbjct: 370 PPPPPPPPELLNHSPKSRP 388
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,660,739
Number of Sequences: 5004
Number of extensions: 55681
Number of successful extensions: 1212
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 143
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 528
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 440481800
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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