Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP16_F_O23
         (921 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

08_01_0375 - 3307206-3307316,3307870-3307965,3308061-3308132,330...    33   0.32 
02_05_1067 - 33858215-33858321,33858422-33858527,33859014-338592...    29   5.2  
10_01_0100 + 1209424-1209538,1210373-1211073,1211158-1211379,121...    23   7.2  

>08_01_0375 -
           3307206-3307316,3307870-3307965,3308061-3308132,
           3308247-3308315,3308427-3308513,3308753-3308858,
           3309118-3309237,3309327-3309406,3309497-3309878,
           3310746-3310814,3311460-3312202
          Length = 644

 Score = 33.1 bits (72), Expect = 0.32
 Identities = 25/92 (27%), Positives = 26/92 (28%)
 Frame = +2

Query: 536 GPPPPXXXXXXKXPFXXXXPPPXLFFXXPXXXGXTPXXXXXXFXXFFFXPXXGXXXXXFF 715
           GPPPP        P     PPP L    P   G  P         F   P          
Sbjct: 29  GPPPPQQPAYGHMPPPQGAPPPFLAPPPPPPPGPPPPHQPQ--FNFGPGPPQQQQPPPPP 86

Query: 716 SXLXKXPPPPPXXXXFXLXPXXXPXXPXXXPP 811
               + PPPPP        P   P  P   PP
Sbjct: 87  QMYYQPPPPPPPYGVNSSQPPPPPPPPPSPPP 118


>02_05_1067 -
           33858215-33858321,33858422-33858527,33859014-33859218,
           33859463-33859650,33859780-33859957,33860201-33860298,
           33860619-33860873,33861002-33861236,33861846-33861973
          Length = 499

 Score = 29.1 bits (62), Expect = 5.2
 Identities = 14/30 (46%), Positives = 20/30 (66%)
 Frame = -3

Query: 211 TL*PIFSRSLKKLPGAAETEAVAKTIANTK 122
           TL P+FS +LKKL  + E+EA  K+ +  K
Sbjct: 457 TLRPVFSSALKKLEESLESEATKKSKSGDK 486


>10_01_0100 +
           1209424-1209538,1210373-1211073,1211158-1211379,
           1211452-1211878,1212091-1213219,1213623-1213746,
           1214207-1214278,1215480-1215578,1215617-1215640,
           1215704-1215745,1215815-1215895,1215983-1216114,
           1216115-1216196,1216271-1216365,1218499-1218570,
           1218676-1218792,1219379-1219447,1219521-1219587,
           1219886-1220025
          Length = 1269

 Score = 23.4 bits (48), Expect(2) = 7.2
 Identities = 9/21 (42%), Positives = 9/21 (42%)
 Frame = +2

Query: 539 PPPPXXXXXXKXPFXXXXPPP 601
           PPPP      K  F    PPP
Sbjct: 548 PPPPPPPSGNKPAFSPPPPPP 568



 Score = 23.4 bits (48), Expect(2) = 7.2
 Identities = 12/32 (37%), Positives = 12/32 (37%)
 Frame = +2

Query: 722 LXKXPPPPPXXXXFXLXPXXXPXXPXXXPPXP 817
           L   PPPPP      L     P  P   PP P
Sbjct: 598 LVPSPPPPPPPPPI-LPNRSVPPPPPPPPPLP 628


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,271,867
Number of Sequences: 37544
Number of extensions: 286972
Number of successful extensions: 940
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 601
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 876
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2624101760
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)