Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP16_F_O22
(838 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC8E11.10 |||sorbose reductase |Schizosaccharomyces pombe|chr ... 33 0.038
SPBPJ4664.02 |||glycoprotein |Schizosaccharomyces pombe|chr 2|||... 28 1.9
SPAC23H3.04 |||conserved fungal protein|Schizosaccharomyces pomb... 27 3.3
SPBC8D2.20c |sec31||COPII-coated vesicle component Sec31 |Schizo... 27 3.3
SPAC1486.10 |thi1|ntf1, SPAC6G10.01|transcription factor Thi1|Sc... 26 5.8
>SPAC8E11.10 |||sorbose reductase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 255
Score = 33.5 bits (73), Expect = 0.038
Identities = 18/54 (33%), Positives = 30/54 (55%), Gaps = 2/54 (3%)
Frame = +1
Query: 112 MLAASAGVV--ELSADTSNQDLEEKLYNSILTGDYDSAVRQSLEYESQGKGSII 267
++ A+AG+ LS + N+D+ K+ L G Y +A ++ QGKGS+I
Sbjct: 91 VMIANAGIAIPHLSLEDKNEDIWTKVVGINLNGAYYTAQAAGHHFKKQGKGSLI 144
>SPBPJ4664.02 |||glycoprotein |Schizosaccharomyces pombe|chr
2|||Manual
Length = 3971
Score = 27.9 bits (59), Expect = 1.9
Identities = 12/28 (42%), Positives = 17/28 (60%)
Frame = +2
Query: 713 LRKRSPVPSSTIANSTMPWXSVXIVNXS 796
L +P+ SST+ NS+ P S +VN S
Sbjct: 1338 LNSSTPITSSTVVNSSTPITSSTVVNTS 1365
Score = 27.9 bits (59), Expect = 1.9
Identities = 12/28 (42%), Positives = 17/28 (60%)
Frame = +2
Query: 713 LRKRSPVPSSTIANSTMPWXSVXIVNXS 796
L +P+ SST+ NS+ P S +VN S
Sbjct: 2178 LNSSTPITSSTVVNSSTPITSSTVVNTS 2205
Score = 26.6 bits (56), Expect = 4.4
Identities = 11/28 (39%), Positives = 17/28 (60%)
Frame = +2
Query: 713 LRKRSPVPSSTIANSTMPWXSVXIVNXS 796
L +P+ SST+ N++ P S +VN S
Sbjct: 474 LNSSTPITSSTVVNTSTPITSSTVVNSS 501
Score = 26.6 bits (56), Expect = 4.4
Identities = 11/28 (39%), Positives = 17/28 (60%)
Frame = +2
Query: 713 LRKRSPVPSSTIANSTMPWXSVXIVNXS 796
L +P+ SST+ N++ P S +VN S
Sbjct: 822 LNSSTPITSSTVVNTSTPITSSTVVNSS 849
Score = 26.6 bits (56), Expect = 4.4
Identities = 11/28 (39%), Positives = 17/28 (60%)
Frame = +2
Query: 713 LRKRSPVPSSTIANSTMPWXSVXIVNXS 796
L +P+ SST+ N++ P S +VN S
Sbjct: 882 LNSSTPITSSTVVNTSTPITSSTVVNSS 909
Score = 26.6 bits (56), Expect = 4.4
Identities = 11/28 (39%), Positives = 17/28 (60%)
Frame = +2
Query: 713 LRKRSPVPSSTIANSTMPWXSVXIVNXS 796
L +P+ SST+ N++ P S +VN S
Sbjct: 1038 LNSSTPITSSTVVNTSTPITSSTVVNSS 1065
Score = 26.6 bits (56), Expect = 4.4
Identities = 11/28 (39%), Positives = 17/28 (60%)
Frame = +2
Query: 713 LRKRSPVPSSTIANSTMPWXSVXIVNXS 796
L +P+ SST+ N++ P S +VN S
Sbjct: 1146 LNSSTPITSSTVVNTSTPITSSTVVNSS 1173
Score = 26.6 bits (56), Expect = 4.4
Identities = 11/24 (45%), Positives = 16/24 (66%)
Frame = +2
Query: 725 SPVPSSTIANSTMPWXSVXIVNXS 796
+P+ SST+ NS+ P S +VN S
Sbjct: 1162 TPITSSTVVNSSTPITSSTVVNTS 1185
Score = 26.6 bits (56), Expect = 4.4
Identities = 11/28 (39%), Positives = 17/28 (60%)
Frame = +2
Query: 713 LRKRSPVPSSTIANSTMPWXSVXIVNXS 796
L +P+ SST+ N++ P S +VN S
Sbjct: 1410 LNSSTPITSSTVVNTSTPITSSTVVNSS 1437
Score = 26.6 bits (56), Expect = 4.4
Identities = 11/24 (45%), Positives = 16/24 (66%)
Frame = +2
Query: 725 SPVPSSTIANSTMPWXSVXIVNXS 796
+P+ SST+ NS+ P S +VN S
Sbjct: 1426 TPITSSTVVNSSTPITSSTVVNTS 1449
Score = 26.6 bits (56), Expect = 4.4
Identities = 11/28 (39%), Positives = 17/28 (60%)
Frame = +2
Query: 713 LRKRSPVPSSTIANSTMPWXSVXIVNXS 796
L +P+ SST+ N++ P S +VN S
Sbjct: 1458 LNSSTPITSSTVVNTSTPITSSTVVNSS 1485
Score = 26.6 bits (56), Expect = 4.4
Identities = 11/24 (45%), Positives = 16/24 (66%)
Frame = +2
Query: 725 SPVPSSTIANSTMPWXSVXIVNXS 796
+P+ SST+ NS+ P S +VN S
Sbjct: 1474 TPITSSTVVNSSTPITSSTVVNTS 1497
Score = 26.6 bits (56), Expect = 4.4
Identities = 11/28 (39%), Positives = 17/28 (60%)
Frame = +2
Query: 713 LRKRSPVPSSTIANSTMPWXSVXIVNXS 796
L +P+ SST+ N++ P S +VN S
Sbjct: 1554 LNSSTPITSSTVVNTSTPITSSSVVNSS 1581
Score = 26.6 bits (56), Expect = 4.4
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = +2
Query: 713 LRKRSPVPSSTIANSTMPWXSVXIVNXS 796
L P+ SST+ NS+ P S +VN S
Sbjct: 1650 LNTSPPITSSTVVNSSTPITSSTVVNTS 1677
Score = 26.6 bits (56), Expect = 4.4
Identities = 11/28 (39%), Positives = 17/28 (60%)
Frame = +2
Query: 713 LRKRSPVPSSTIANSTMPWXSVXIVNXS 796
L +P+ SST+ N++ P S +VN S
Sbjct: 1710 LNSSTPITSSTVVNTSTPITSSTVVNSS 1737
Score = 26.6 bits (56), Expect = 4.4
Identities = 11/24 (45%), Positives = 16/24 (66%)
Frame = +2
Query: 725 SPVPSSTIANSTMPWXSVXIVNXS 796
+P+ SST+ NS+ P S +VN S
Sbjct: 1726 TPITSSTVVNSSTPITSSTVVNSS 1749
Score = 26.6 bits (56), Expect = 4.4
Identities = 11/28 (39%), Positives = 17/28 (60%)
Frame = +2
Query: 713 LRKRSPVPSSTIANSTMPWXSVXIVNXS 796
L +P+ SST+ N++ P S +VN S
Sbjct: 1818 LNSSTPITSSTVVNTSTPITSSTVVNSS 1845
Score = 26.6 bits (56), Expect = 4.4
Identities = 11/28 (39%), Positives = 17/28 (60%)
Frame = +2
Query: 713 LRKRSPVPSSTIANSTMPWXSVXIVNXS 796
L +P+ SST+ N++ P S +VN S
Sbjct: 2010 LNSSTPITSSTVVNTSTPITSSTVVNSS 2037
Score = 26.6 bits (56), Expect = 4.4
Identities = 11/28 (39%), Positives = 17/28 (60%)
Frame = +2
Query: 713 LRKRSPVPSSTIANSTMPWXSVXIVNXS 796
L +P+ SST+ N++ P S +VN S
Sbjct: 2250 LNSSTPITSSTVVNTSTPITSSTVVNSS 2277
Score = 26.6 bits (56), Expect = 4.4
Identities = 11/24 (45%), Positives = 16/24 (66%)
Frame = +2
Query: 725 SPVPSSTIANSTMPWXSVXIVNXS 796
+P+ SST+ NS+ P S +VN S
Sbjct: 2266 TPITSSTVVNSSTPITSSTVVNTS 2289
Score = 26.6 bits (56), Expect = 4.4
Identities = 11/28 (39%), Positives = 17/28 (60%)
Frame = +2
Query: 713 LRKRSPVPSSTIANSTMPWXSVXIVNXS 796
L +P+ SST+ N++ P S +VN S
Sbjct: 2490 LNSSTPITSSTVVNTSTPITSSTVVNSS 2517
Score = 26.6 bits (56), Expect = 4.4
Identities = 11/28 (39%), Positives = 17/28 (60%)
Frame = +2
Query: 713 LRKRSPVPSSTIANSTMPWXSVXIVNXS 796
L +P+ SST+ N++ P S +VN S
Sbjct: 2538 LNSSTPITSSTVVNTSTPITSSTVVNSS 2565
Score = 26.6 bits (56), Expect = 4.4
Identities = 11/28 (39%), Positives = 17/28 (60%)
Frame = +2
Query: 713 LRKRSPVPSSTIANSTMPWXSVXIVNXS 796
L +P+ SST+ N++ P S +VN S
Sbjct: 2586 LNSSTPITSSTVVNTSTPITSSTVVNSS 2613
Score = 26.6 bits (56), Expect = 4.4
Identities = 11/28 (39%), Positives = 17/28 (60%)
Frame = +2
Query: 713 LRKRSPVPSSTIANSTMPWXSVXIVNXS 796
L +P+ SST+ N++ P S +VN S
Sbjct: 2682 LNSSTPITSSTVVNTSTPITSSTVVNSS 2709
Score = 26.6 bits (56), Expect = 4.4
Identities = 11/28 (39%), Positives = 17/28 (60%)
Frame = +2
Query: 713 LRKRSPVPSSTIANSTMPWXSVXIVNXS 796
L +P+ SST+ N++ P S +VN S
Sbjct: 2790 LNSSTPITSSTVVNTSTPITSSTVVNSS 2817
Score = 26.6 bits (56), Expect = 4.4
Identities = 11/28 (39%), Positives = 17/28 (60%)
Frame = +2
Query: 713 LRKRSPVPSSTIANSTMPWXSVXIVNXS 796
L +P+ SST+ N++ P S +VN S
Sbjct: 2910 LNSSTPITSSTVVNTSTPITSSTVVNSS 2937
Score = 26.6 bits (56), Expect = 4.4
Identities = 11/28 (39%), Positives = 17/28 (60%)
Frame = +2
Query: 713 LRKRSPVPSSTIANSTMPWXSVXIVNXS 796
L +P+ SST+ N++ P S +VN S
Sbjct: 3006 LNSSTPITSSTVVNTSTPITSSTVVNSS 3033
Score = 26.6 bits (56), Expect = 4.4
Identities = 11/28 (39%), Positives = 17/28 (60%)
Frame = +2
Query: 713 LRKRSPVPSSTIANSTMPWXSVXIVNXS 796
L +P+ SST+ N++ P S +VN S
Sbjct: 3270 LNSSTPITSSTVVNTSTPITSSTVVNSS 3297
Score = 26.2 bits (55), Expect = 5.8
Identities = 12/28 (42%), Positives = 17/28 (60%)
Frame = +2
Query: 713 LRKRSPVPSSTIANSTMPWXSVXIVNXS 796
L +PV SS++ NS+ P S +VN S
Sbjct: 3354 LNSSTPVTSSSVLNSSTPITSSTVVNSS 3381
>SPAC23H3.04 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 300
Score = 27.1 bits (57), Expect = 3.3
Identities = 13/26 (50%), Positives = 18/26 (69%)
Frame = -2
Query: 237 FQALTDSTVVVAGEDAVVQFLLEVLV 160
F +T V+V EDAVV+F+L +LV
Sbjct: 181 FLGVTVQYVMVLPEDAVVEFVLTILV 206
>SPBC8D2.20c |sec31||COPII-coated vesicle component Sec31
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1224
Score = 27.1 bits (57), Expect = 3.3
Identities = 12/26 (46%), Positives = 18/26 (69%)
Frame = +1
Query: 160 NQDLEEKLYNSILTGDYDSAVRQSLE 237
+ DLE+ + ++LTGD SAV+ LE
Sbjct: 551 DSDLEKNITEALLTGDVLSAVKACLE 576
>SPAC1486.10 |thi1|ntf1, SPAC6G10.01|transcription factor
Thi1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 775
Score = 26.2 bits (55), Expect = 5.8
Identities = 13/37 (35%), Positives = 19/37 (51%)
Frame = +2
Query: 125 ARASLNYPRTLLTKTSRRNCTTASSPATTTVLSVRAW 235
AR SLNY ++ + SRRN ++P S + W
Sbjct: 622 ARESLNYLKSFNKQLSRRNAPDINNPIADFQNSFQNW 658
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,248,045
Number of Sequences: 5004
Number of extensions: 63102
Number of successful extensions: 216
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 172
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 216
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 412451140
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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