Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP16_F_O20
         (893 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC007516-1|AAH07516.1|   83|Homo sapiens ELOF1 protein protein.       115   3e-25
AL607122-5|CAI14974.1|  495|Homo sapiens forkhead box D2 protein.      32   3.2  
AF042832-1|AAC15421.1|  497|Homo sapiens forkhead-related transc...    32   3.2  
BC063833-1|AAH63833.1| 1336|Homo sapiens collagen, type XVIII, a...    31   7.5  
BC033715-1|AAH33715.1|  816|Homo sapiens Similar to collagen, ty...    31   7.5  
AY484971-3|AAR83297.1| 1516|Homo sapiens type XVIII collagen mid...    31   7.5  
AY484971-2|AAR83296.1| 1751|Homo sapiens type XVIII collagen lon...    31   7.5  
AY484971-1|AAR83298.1| 1336|Homo sapiens type XVIII collagen sho...    31   7.5  
AL163302-2|CAB90482.1| 1519|Homo sapiens human type XVIII collag...    31   7.5  
AF018082-1|AAC39659.1| 1336|Homo sapiens type XVIII collagen pro...    31   7.5  
AF018081-1|AAC39658.1| 1516|Homo sapiens type XVIII collagen pro...    31   7.5  

>BC007516-1|AAH07516.1|   83|Homo sapiens ELOF1 protein protein.
          Length = 83

 Score =  115 bits (276), Expect = 3e-25
 Identities = 47/66 (71%), Positives = 54/66 (81%)
 Frame = +1

Query: 121 TEALDQQFNCPFCNHEKSCEVKMDRARNTARIQCRVCLEDFQTTTNVLSEPIDVYNDWVD 300
           T  L+ QF CPFCNHEKSC+VKMDRARNT  I C VCLE+FQT    LSEP+DVY+DW+D
Sbjct: 17  TGTLETQFTCPFCNHEKSCDVKMDRARNTGVISCTVCLEEFQTPITYLSEPVDVYSDWID 76

Query: 301 ACESAN 318
           ACE+AN
Sbjct: 77  ACEAAN 82


>AL607122-5|CAI14974.1|  495|Homo sapiens forkhead box D2 protein.
          Length = 495

 Score = 31.9 bits (69), Expect = 3.2
 Identities = 21/68 (30%), Positives = 25/68 (36%)
 Frame = +1

Query: 610 PHQXAFXFXXXGSGXRCGDGFSLPLMKXAPPPRGKRGXLXFLGAXSRSLRSXDXPXPPGP 789
           PH  AF F    +   C    S+P  + A PP G      F GA S    +      PGP
Sbjct: 290 PHPHAFAFAAAAAAAPCQ--LSVPPGRAAAPPPGPPTASVFAGAGSAPAPAPASGSGPGP 347

Query: 790 SXXRXPGF 813
                P F
Sbjct: 348 GPAGLPAF 355


>AF042832-1|AAC15421.1|  497|Homo sapiens forkhead-related
           transcription factor FREAC-9 protein.
          Length = 497

 Score = 31.9 bits (69), Expect = 3.2
 Identities = 21/68 (30%), Positives = 25/68 (36%)
 Frame = +1

Query: 610 PHQXAFXFXXXGSGXRCGDGFSLPLMKXAPPPRGKRGXLXFLGAXSRSLRSXDXPXPPGP 789
           PH  AF F    +   C    S+P  + A PP G      F GA S    +      PGP
Sbjct: 292 PHPHAFAFAAAAAAAPCQ--LSVPPGRAAAPPPGPPTASVFAGAGSAPAPAPASGSGPGP 349

Query: 790 SXXRXPGF 813
                P F
Sbjct: 350 GPAGLPAF 357


>BC063833-1|AAH63833.1| 1336|Homo sapiens collagen, type XVIII,
           alpha 1 protein.
          Length = 1336

 Score = 30.7 bits (66), Expect = 7.5
 Identities = 17/43 (39%), Positives = 18/43 (41%)
 Frame = +1

Query: 688 KXAPPPRGKRGXLXFLGAXSRSLRSXDXPXPPGPSXXRXPGFP 816
           K AP P G RG     GA   +      P PPGP     PG P
Sbjct: 570 KGAPGPAGARGESGLAGAPGPA----GPPGPPGPPGPPGPGLP 608


>BC033715-1|AAH33715.1|  816|Homo sapiens Similar to collagen, type
           XVIII, alpha 1 protein.
          Length = 816

 Score = 30.7 bits (66), Expect = 7.5
 Identities = 17/43 (39%), Positives = 18/43 (41%)
 Frame = +1

Query: 688 KXAPPPRGKRGXLXFLGAXSRSLRSXDXPXPPGPSXXRXPGFP 816
           K AP P G RG     GA   +      P PPGP     PG P
Sbjct: 50  KGAPGPAGARGESGLAGAPGPA----GPPGPPGPPGPPGPGLP 88


>AY484971-3|AAR83297.1| 1516|Homo sapiens type XVIII collagen middle
           variant protein.
          Length = 1516

 Score = 30.7 bits (66), Expect = 7.5
 Identities = 17/43 (39%), Positives = 18/43 (41%)
 Frame = +1

Query: 688 KXAPPPRGKRGXLXFLGAXSRSLRSXDXPXPPGPSXXRXPGFP 816
           K AP P G RG     GA   +      P PPGP     PG P
Sbjct: 750 KGAPGPAGARGESGLAGAPGPA----GPPGPPGPPGPPGPGLP 788


>AY484971-2|AAR83296.1| 1751|Homo sapiens type XVIII collagen long
            variant protein.
          Length = 1751

 Score = 30.7 bits (66), Expect = 7.5
 Identities = 17/43 (39%), Positives = 18/43 (41%)
 Frame = +1

Query: 688  KXAPPPRGKRGXLXFLGAXSRSLRSXDXPXPPGPSXXRXPGFP 816
            K AP P G RG     GA   +      P PPGP     PG P
Sbjct: 985  KGAPGPAGARGESGLAGAPGPA----GPPGPPGPPGPPGPGLP 1023


>AY484971-1|AAR83298.1| 1336|Homo sapiens type XVIII collagen short
           variant protein.
          Length = 1336

 Score = 30.7 bits (66), Expect = 7.5
 Identities = 17/43 (39%), Positives = 18/43 (41%)
 Frame = +1

Query: 688 KXAPPPRGKRGXLXFLGAXSRSLRSXDXPXPPGPSXXRXPGFP 816
           K AP P G RG     GA   +      P PPGP     PG P
Sbjct: 570 KGAPGPAGARGESGLAGAPGPA----GPPGPPGPPGPPGPGLP 608


>AL163302-2|CAB90482.1| 1519|Homo sapiens human type XVIII collagen
           protein.
          Length = 1519

 Score = 30.7 bits (66), Expect = 7.5
 Identities = 17/43 (39%), Positives = 18/43 (41%)
 Frame = +1

Query: 688 KXAPPPRGKRGXLXFLGAXSRSLRSXDXPXPPGPSXXRXPGFP 816
           K AP P G RG     GA   +      P PPGP     PG P
Sbjct: 750 KGAPGPAGARGESGLAGAPGPA----GPPGPPGPPGPPGPGLP 788


>AF018082-1|AAC39659.1| 1336|Homo sapiens type XVIII collagen
           protein.
          Length = 1336

 Score = 30.7 bits (66), Expect = 7.5
 Identities = 17/43 (39%), Positives = 18/43 (41%)
 Frame = +1

Query: 688 KXAPPPRGKRGXLXFLGAXSRSLRSXDXPXPPGPSXXRXPGFP 816
           K AP P G RG     GA   +      P PPGP     PG P
Sbjct: 570 KGAPGPAGARGESGLAGAPGPA----GPPGPPGPPGPPGPGLP 608


>AF018081-1|AAC39658.1| 1516|Homo sapiens type XVIII collagen
           protein.
          Length = 1516

 Score = 30.7 bits (66), Expect = 7.5
 Identities = 17/43 (39%), Positives = 18/43 (41%)
 Frame = +1

Query: 688 KXAPPPRGKRGXLXFLGAXSRSLRSXDXPXPPGPSXXRXPGFP 816
           K AP P G RG     GA   +      P PPGP     PG P
Sbjct: 750 KGAPGPAGARGESGLAGAPGPA----GPPGPPGPPGPPGPGLP 788


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 107,533,132
Number of Sequences: 237096
Number of extensions: 2021148
Number of successful extensions: 3333
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 3162
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3331
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11492727354
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)