Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP16_F_O19
(857 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin cyt... 31 1.4
U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin cyt... 31 1.4
Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical pr... 30 1.8
Z97190-1|CAB10024.1| 1111|Caenorhabditis elegans Hypothetical pr... 29 4.2
Z78013-1|CAB01425.3| 1140|Caenorhabditis elegans Hypothetical pr... 29 4.2
AC024754-1|AAK71405.1| 394|Caenorhabditis elegans Hypothetical ... 29 4.2
Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical pr... 29 5.6
Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical pr... 29 5.6
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 28 9.8
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 28 9.8
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 28 9.8
>U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform b
protein.
Length = 781
Score = 30.7 bits (66), Expect = 1.4
Identities = 14/43 (32%), Positives = 17/43 (39%)
Frame = +2
Query: 701 PPPXEKXXGAAXLXTXKXTPPPXPPXXFPPXKXXXFXTTTPPP 829
PPP + G A + + PPP PP P PPP
Sbjct: 613 PPPPPQSFGMAPISSAAPPPPPPPPPMGLPAVGAGAPPPPPPP 655
>U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform a
protein.
Length = 607
Score = 30.7 bits (66), Expect = 1.4
Identities = 14/43 (32%), Positives = 17/43 (39%)
Frame = +2
Query: 701 PPPXEKXXGAAXLXTXKXTPPPXPPXXFPPXKXXXFXTTTPPP 829
PPP + G A + + PPP PP P PPP
Sbjct: 439 PPPPPQSFGMAPISSAAPPPPPPPPPMGLPAVGAGAPPPPPPP 481
>Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical
protein E02A10.2 protein.
Length = 385
Score = 30.3 bits (65), Expect = 1.8
Identities = 13/29 (44%), Positives = 13/29 (44%)
Frame = -2
Query: 829 GGGGCXXKXXXFXXGEXXWGGGGGCXFXC 743
GGGGC G GGGGGC C
Sbjct: 81 GGGGCGGGGGGCGGGGGGCGGGGGCGGGC 109
Score = 28.7 bits (61), Expect = 5.6
Identities = 12/25 (48%), Positives = 12/25 (48%)
Frame = -2
Query: 829 GGGGCXXKXXXFXXGEXXWGGGGGC 755
GGGGC G GGGGGC
Sbjct: 68 GGGGCGGGGGGCGGGGGCGGGGGGC 92
Score = 28.7 bits (61), Expect = 5.6
Identities = 13/32 (40%), Positives = 13/32 (40%)
Frame = -2
Query: 826 GGGCXXKXXXFXXGEXXWGGGGGCXFXCXXXG 731
GGGC G GGGGGC C G
Sbjct: 106 GGGCAPPPPPPACGGGCGGGGGGCGGGCGGGG 137
Score = 28.3 bits (60), Expect = 7.4
Identities = 12/25 (48%), Positives = 12/25 (48%)
Frame = -2
Query: 829 GGGGCXXKXXXFXXGEXXWGGGGGC 755
GGGGC G GGGGGC
Sbjct: 75 GGGGCGGGGGCGGGGGGCGGGGGGC 99
Score = 28.3 bits (60), Expect = 7.4
Identities = 12/25 (48%), Positives = 12/25 (48%)
Frame = -2
Query: 829 GGGGCXXKXXXFXXGEXXWGGGGGC 755
GGGGC G GGGGGC
Sbjct: 125 GGGGCGGGCGGGGGGGCGGGGGGGC 149
>Z97190-1|CAB10024.1| 1111|Caenorhabditis elegans Hypothetical protein
H05G16.1 protein.
Length = 1111
Score = 29.1 bits (62), Expect = 4.2
Identities = 10/25 (40%), Positives = 14/25 (56%)
Frame = +2
Query: 701 PPPXEKXXGAAXLXTXKXTPPPXPP 775
PPP E+ A + + + PPP PP
Sbjct: 1023 PPPPEEILNKAMISSSRPAPPPPPP 1047
>Z78013-1|CAB01425.3| 1140|Caenorhabditis elegans Hypothetical
protein F15B9.4 protein.
Length = 1140
Score = 29.1 bits (62), Expect = 4.2
Identities = 16/52 (30%), Positives = 18/52 (34%)
Frame = +2
Query: 701 PPPXEKXXGAAXLXTXKXTPPPXPPXXFPPXKXXXFXTTTPPPXXVXXGXXP 856
PPP G A + T PPP P P PPP + G P
Sbjct: 503 PPPPPPLLGIAPMSTNAPPPPPMP--GMAPLSTGAPTPPPPPPVGMANGGPP 552
>AC024754-1|AAK71405.1| 394|Caenorhabditis elegans Hypothetical
protein Y32G9B.1 protein.
Length = 394
Score = 29.1 bits (62), Expect = 4.2
Identities = 13/26 (50%), Positives = 14/26 (53%), Gaps = 1/26 (3%)
Frame = +2
Query: 755 TPPPXPPXXFPPXKXXXFXT-TTPPP 829
TPP PP FP F T +TPPP
Sbjct: 89 TPPTPPPSTFPTLPPLTFGTPSTPPP 114
>Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 28.7 bits (61), Expect = 5.6
Identities = 12/25 (48%), Positives = 12/25 (48%)
Frame = -2
Query: 829 GGGGCXXKXXXFXXGEXXWGGGGGC 755
GGGGC G GGGGGC
Sbjct: 86 GGGGCGGGGGGCGGGGGCGGGGGGC 110
Score = 28.3 bits (60), Expect = 7.4
Identities = 12/25 (48%), Positives = 12/25 (48%)
Frame = -2
Query: 829 GGGGCXXKXXXFXXGEXXWGGGGGC 755
GGGGC G GGGGGC
Sbjct: 93 GGGGCGGGGGCGGGGGGCGGGGGGC 117
>Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 28.7 bits (61), Expect = 5.6
Identities = 12/25 (48%), Positives = 12/25 (48%)
Frame = -2
Query: 829 GGGGCXXKXXXFXXGEXXWGGGGGC 755
GGGGC G GGGGGC
Sbjct: 86 GGGGCGGGGGGCGGGGGCGGGGGGC 110
Score = 28.3 bits (60), Expect = 7.4
Identities = 12/25 (48%), Positives = 12/25 (48%)
Frame = -2
Query: 829 GGGGCXXKXXXFXXGEXXWGGGGGC 755
GGGGC G GGGGGC
Sbjct: 93 GGGGCGGGGGCGGGGGGCGGGGGGC 117
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 27.9 bits (59), Expect = 9.8
Identities = 23/82 (28%), Positives = 24/82 (29%)
Frame = +2
Query: 611 PXPRGGXPXXGRXXXXXXXXXXTFSXGGXTPPPXEKXXGAAXLXTXKXTPPPXPPXXFPP 790
P P G P G GG PPP G + PPP PP PP
Sbjct: 714 PPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPP---GGLPPISGGPPPPPPPPGGCPP 770
Query: 791 XKXXXFXTTTPPPXXVXXGXXP 856
PPP G P
Sbjct: 771 ------PPPPPPPGGFKGGPPP 786
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 27.9 bits (59), Expect = 9.8
Identities = 23/82 (28%), Positives = 24/82 (29%)
Frame = +2
Query: 611 PXPRGGXPXXGRXXXXXXXXXXTFSXGGXTPPPXEKXXGAAXLXTXKXTPPPXPPXXFPP 790
P P G P G GG PPP G + PPP PP PP
Sbjct: 714 PPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPP---GGLPPISGGPPPPPPPPGGCPP 770
Query: 791 XKXXXFXTTTPPPXXVXXGXXP 856
PPP G P
Sbjct: 771 ------PPPPPPPGGFKGGPPP 786
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 27.9 bits (59), Expect = 9.8
Identities = 23/82 (28%), Positives = 24/82 (29%)
Frame = +2
Query: 611 PXPRGGXPXXGRXXXXXXXXXXTFSXGGXTPPPXEKXXGAAXLXTXKXTPPPXPPXXFPP 790
P P G P G GG PPP G + PPP PP PP
Sbjct: 297 PPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPP---GGLPPISGGPPPPPPPPGGCPP 353
Query: 791 XKXXXFXTTTPPPXXVXXGXXP 856
PPP G P
Sbjct: 354 ------PPPPPPPGGFKGGPPP 369
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,141,378
Number of Sequences: 27780
Number of extensions: 219025
Number of successful extensions: 729
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 494
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 668
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2139963672
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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