Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP16_F_O18
(859 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z82259-3|CAB05127.1| 368|Caenorhabditis elegans Hypothetical pr... 103 2e-22
Z80223-3|CAB02317.1| 369|Caenorhabditis elegans Hypothetical pr... 101 7e-22
AL110479-26|CAB54376.1| 385|Caenorhabditis elegans Hypothetical... 101 7e-22
AL110479-25|CAB60321.1| 388|Caenorhabditis elegans Hypothetical... 101 7e-22
Z29560-1|CAA82655.1| 367|Caenorhabditis elegans Hypothetical pr... 95 4e-20
AC006618-2|AAK68249.1| 340|Caenorhabditis elegans Glutamine syn... 90 2e-18
Z83744-4|CAB06040.4| 735|Caenorhabditis elegans Hypothetical pr... 33 0.26
Z74038-8|CAD21642.1| 540|Caenorhabditis elegans Hypothetical pr... 28 7.4
Z72507-16|CAC35887.1| 540|Caenorhabditis elegans Hypothetical p... 28 7.4
U70844-4|AAB09095.2| 1105|Caenorhabditis elegans Hypothetical pr... 28 9.8
>Z82259-3|CAB05127.1| 368|Caenorhabditis elegans Hypothetical
protein C28D4.3 protein.
Length = 368
Score = 103 bits (246), Expect = 2e-22
Identities = 46/89 (51%), Positives = 59/89 (66%)
Frame = +1
Query: 277 LSKTLLSRYNDLPLPADKILATYIWIDGSGEHLRCKDRTLNFIPKAPKDLPIWNFDGSST 456
L + + + LP K ATY+WIDG+GEHLR K RT+N P+ + PIWN+DGSST
Sbjct: 12 LGQATIDHFMGLPAHPTKCQATYVWIDGTGEHLRAKTRTINTKPQYLSEYPIWNYDGSST 71
Query: 457 NQADGHNSDTYLVPRAIYKDPFRRGNHIL 543
QADG NSD YL P A++ DPF G ++L
Sbjct: 72 GQADGLNSDRYLRPVAVFPDPFLGGLNVL 100
Score = 44.8 bits (101), Expect = 8e-05
Identities = 22/60 (36%), Positives = 30/60 (50%)
Frame = +2
Query: 545 LMCDTYKYNMEPTESNNRISCQEAYDKCQDDXPWFWDRTGIYFTGIQICXPSGGPRAGFP 724
+MCDT + M+PT +N+R C E K D PWF Y + P G P+ G+P
Sbjct: 101 VMCDTLDHEMKPTATNHRQMCAELMKKVSDQQPWF-GMEQEYLIVDRDEHPLGWPKHGYP 159
>Z80223-3|CAB02317.1| 369|Caenorhabditis elegans Hypothetical
protein F26D10.10 protein.
Length = 369
Score = 101 bits (242), Expect = 7e-22
Identities = 44/89 (49%), Positives = 59/89 (66%)
Frame = +1
Query: 277 LSKTLLSRYNDLPLPADKILATYIWIDGSGEHLRCKDRTLNFIPKAPKDLPIWNFDGSST 456
L + + + LP K ATY+WIDG+GE LR K RT N P+ + PIWN+DGSST
Sbjct: 12 LGQATIDHFMGLPAHPSKCQATYVWIDGTGEQLRAKTRTFNLKPQYLSEYPIWNYDGSST 71
Query: 457 NQADGHNSDTYLVPRAIYKDPFRRGNHIL 543
QA+G NSD YL P A++ DPF +G+++L
Sbjct: 72 GQAEGLNSDRYLRPVAVFPDPFLQGHNVL 100
Score = 37.5 bits (83), Expect = 0.012
Identities = 19/60 (31%), Positives = 29/60 (48%)
Frame = +2
Query: 545 LMCDTYKYNMEPTESNNRISCQEAYDKCQDDXPWFWDRTGIYFTGIQICXPSGGPRAGFP 724
+MC+T M+PT +N+R +C K + PWF Y + P G P+ G+P
Sbjct: 101 VMCETLDETMKPTATNHRQNCAAIMKKVAEHHPWF-GMEQEYLIVDRDEHPLGWPKHGYP 159
>AL110479-26|CAB54376.1| 385|Caenorhabditis elegans Hypothetical
protein Y105C5B.28b protein.
Length = 385
Score = 101 bits (242), Expect = 7e-22
Identities = 45/69 (65%), Positives = 53/69 (76%)
Frame = +1
Query: 337 ATYIWIDGSGEHLRCKDRTLNFIPKAPKDLPIWNFDGSSTNQADGHNSDTYLVPRAIYKD 516
A YIWIDGSGE++R K RT +F P P+ LPIWNFDGSST QA+G +SD YL P AIY D
Sbjct: 30 ALYIWIDGSGENIRAKTRTFDFEPTDPEKLPIWNFDGSSTGQAEGADSDVYLKPVAIYPD 89
Query: 517 PFRRGNHIL 543
PFR+G + L
Sbjct: 90 PFRQGKNKL 98
Score = 45.6 bits (103), Expect = 5e-05
Identities = 22/60 (36%), Positives = 29/60 (48%)
Frame = +2
Query: 545 LMCDTYKYNMEPTESNNRISCQEAYDKCQDDXPWFWDRTGIYFTGIQICXPSGGPRAGFP 724
+MC+TY +PT +N R C+E +K D PWF I P G P+ GFP
Sbjct: 99 VMCETYDNKKKPTATNYRQRCKEVMEKAADQHPWFGMEQEYTLLDID-GHPFGWPKNGFP 157
>AL110479-25|CAB60321.1| 388|Caenorhabditis elegans Hypothetical
protein Y105C5B.28a protein.
Length = 388
Score = 101 bits (242), Expect = 7e-22
Identities = 45/69 (65%), Positives = 53/69 (76%)
Frame = +1
Query: 337 ATYIWIDGSGEHLRCKDRTLNFIPKAPKDLPIWNFDGSSTNQADGHNSDTYLVPRAIYKD 516
A YIWIDGSGE++R K RT +F P P+ LPIWNFDGSST QA+G +SD YL P AIY D
Sbjct: 33 ALYIWIDGSGENIRAKTRTFDFEPTDPEKLPIWNFDGSSTGQAEGADSDVYLKPVAIYPD 92
Query: 517 PFRRGNHIL 543
PFR+G + L
Sbjct: 93 PFRQGKNKL 101
Score = 45.6 bits (103), Expect = 5e-05
Identities = 22/60 (36%), Positives = 29/60 (48%)
Frame = +2
Query: 545 LMCDTYKYNMEPTESNNRISCQEAYDKCQDDXPWFWDRTGIYFTGIQICXPSGGPRAGFP 724
+MC+TY +PT +N R C+E +K D PWF I P G P+ GFP
Sbjct: 102 VMCETYDNKKKPTATNYRQRCKEVMEKAADQHPWFGMEQEYTLLDID-GHPFGWPKNGFP 160
>Z29560-1|CAA82655.1| 367|Caenorhabditis elegans Hypothetical
protein K03H1.1 protein.
Length = 367
Score = 95.5 bits (227), Expect = 4e-20
Identities = 45/89 (50%), Positives = 58/89 (65%)
Frame = +1
Query: 277 LSKTLLSRYNDLPLPADKILATYIWIDGSGEHLRCKDRTLNFIPKAPKDLPIWNFDGSST 456
L ++ ++ L KI ATY+WIDG+GE+LR K RT + +PK +D PIWN+DGSST
Sbjct: 12 LGTAVIDQFLGLRPHPTKIQATYVWIDGTGENLRSKTRTFDKLPKRIEDYPIWNYDGSST 71
Query: 457 NQADGHNSDTYLVPRAIYKDPFRRGNHIL 543
QA G +SD YL P A Y DPF G + L
Sbjct: 72 GQAKGRDSDRYLRPVAAYPDPFLGGGNKL 100
Score = 43.6 bits (98), Expect = 2e-04
Identities = 21/60 (35%), Positives = 32/60 (53%)
Frame = +2
Query: 545 LMCDTYKYNMEPTESNNRISCQEAYDKCQDDXPWFWDRTGIYFTGIQICXPSGGPRAGFP 724
+MCDT + M+PT +++R +C E + +D PWF Y + P G P+ GFP
Sbjct: 101 VMCDTLDHQMQPTATSHRQACAEIMHEIRDTRPWF-GMEQEYLIVDRDEHPLGWPKHGFP 159
>AC006618-2|AAK68249.1| 340|Caenorhabditis elegans Glutamine
synthetase (glutamate-ammonia ligase) protein 1 protein.
Length = 340
Score = 90.2 bits (214), Expect = 2e-18
Identities = 38/68 (55%), Positives = 50/68 (73%)
Frame = +1
Query: 343 YIWIDGSGEHLRCKDRTLNFIPKAPKDLPIWNFDGSSTNQADGHNSDTYLVPRAIYKDPF 522
YIWID + E++R K +T +F PK P DLPIWNFDG+ST Q+ G SD Y+ P A+Y+DPF
Sbjct: 35 YIWIDATQENMRGKTKTFDFEPKTPSDLPIWNFDGTSTGQSLGEGSDVYIRPIALYRDPF 94
Query: 523 RRGNHILA 546
R G + +A
Sbjct: 95 RPGPNKIA 102
Score = 35.1 bits (77), Expect = 0.065
Identities = 17/59 (28%), Positives = 26/59 (44%)
Frame = +2
Query: 548 MCDTYKYNMEPTESNNRISCQEAYDKCQDDXPWFWDRTGIYFTGIQICXPSGGPRAGFP 724
+C+T ++ +P +N R C + +K +D PWF G P P GFP
Sbjct: 103 LCETLTHDNKPHPTNTRQQCVDNMEKAKDQEPWFGMEQEFTLLGAD-KHPYNWPVNGFP 160
>Z83744-4|CAB06040.4| 735|Caenorhabditis elegans Hypothetical
protein C06A12.4 protein.
Length = 735
Score = 33.1 bits (72), Expect = 0.26
Identities = 16/40 (40%), Positives = 21/40 (52%)
Frame = +2
Query: 515 IHSVEEITSSLMCDTYKYNMEPTESNNRISCQEAYDKCQD 634
IHSVE S LM + +N+ P SNN DKC++
Sbjct: 405 IHSVERPGSGLMMEILDHNLMPFISNNETQEDTLLDKCKE 444
>Z74038-8|CAD21642.1| 540|Caenorhabditis elegans Hypothetical
protein F17C11.12 protein.
Length = 540
Score = 28.3 bits (60), Expect = 7.4
Identities = 12/20 (60%), Positives = 15/20 (75%)
Frame = -1
Query: 631 LAFVVSFLTTDAIVALCWLH 572
LA V+SFLT AI+ L +LH
Sbjct: 237 LALVISFLTVPAIIMLAFLH 256
>Z72507-16|CAC35887.1| 540|Caenorhabditis elegans Hypothetical
protein F17C11.12 protein.
Length = 540
Score = 28.3 bits (60), Expect = 7.4
Identities = 12/20 (60%), Positives = 15/20 (75%)
Frame = -1
Query: 631 LAFVVSFLTTDAIVALCWLH 572
LA V+SFLT AI+ L +LH
Sbjct: 237 LALVISFLTVPAIIMLAFLH 256
>U70844-4|AAB09095.2| 1105|Caenorhabditis elegans Hypothetical
protein ZK154.5 protein.
Length = 1105
Score = 27.9 bits (59), Expect = 9.8
Identities = 12/44 (27%), Positives = 21/44 (47%)
Frame = +1
Query: 190 KMADTAHTKIEDNPKILSGPVLTNSPNAVLSKTLLSRYNDLPLP 321
K + HT E P+IL P++ + P + + +N+L P
Sbjct: 375 KQEEQEHTNGEKKPEILDEPIIQDEPRTMRPHEHCAIFNNLSTP 418
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,104,009
Number of Sequences: 27780
Number of extensions: 414763
Number of successful extensions: 1044
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 965
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1040
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2139963672
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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