Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP16_F_O17
         (1020 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

07_01_0862 - 7172083-7172931                                           33   0.48 
10_08_0514 + 18465474-18465760,18465888-18465978,18466670-184667...    29   4.5  
06_02_0257 - 13533689-13533714,13533799-13533925,13534013-135341...    29   4.5  
01_03_0005 + 11568545-11569119,11569179-11569191                       29   6.0  
08_01_0420 + 3726392-3727116,3727450-3727648,3727787-3727879,372...    29   7.9  

>07_01_0862 - 7172083-7172931
          Length = 282

 Score = 32.7 bits (71), Expect = 0.48
 Identities = 21/66 (31%), Positives = 23/66 (34%), Gaps = 2/66 (3%)
 Frame = +3

Query: 777 PPPPXXXXXXXXXXXXXXFXPP--KKKKKXXFXXXXXKKKKRGGXPXXPXXKKKXKPPPX 950
           PPPP              F PP   +KK   F      +KK    P     KKK  PPP 
Sbjct: 128 PPPPPPPPPTAEEKKLLLFPPPLPPRKKAMLFPLPLPPRKKPLLYPPPLPPKKKPLPPPS 187

Query: 951 XXXXPP 968
               PP
Sbjct: 188 PPPQPP 193


>10_08_0514 +
           18465474-18465760,18465888-18465978,18466670-18466767,
           18466852-18466949,18468192-18468321,18468410-18468597,
           18470291-18470323,18470627-18471000,18471116-18471294,
           18471421-18471532,18471655-18471771,18471875-18472189,
           18472405-18472743
          Length = 786

 Score = 29.5 bits (63), Expect = 4.5
 Identities = 11/21 (52%), Positives = 12/21 (57%)
 Frame = -1

Query: 621 GGGGKKXGXXXXPPPPXKXPP 559
           GGGG K G    P PP + PP
Sbjct: 344 GGGGNKKGRRDSPSPPLETPP 364


>06_02_0257 -
           13533689-13533714,13533799-13533925,13534013-13534121,
           13534193-13534272,13534758-13534979,13536070-13536318,
           13537032-13537484,13539834-13540556
          Length = 662

 Score = 29.5 bits (63), Expect = 4.5
 Identities = 11/23 (47%), Positives = 12/23 (52%)
 Frame = -1

Query: 621 GGGGKKXGXXXXPPPPXKXPPPP 553
           GGGG + G    PP     PPPP
Sbjct: 46  GGGGDRRGGFQLPPDAAPPPPPP 68


>01_03_0005 + 11568545-11569119,11569179-11569191
          Length = 195

 Score = 29.1 bits (62), Expect = 6.0
 Identities = 14/39 (35%), Positives = 18/39 (46%), Gaps = 2/39 (5%)
 Frame = +3

Query: 555 GGGXFFXGXGGXXXPXXFXXPP--PXXXFFFFXXPPPFF 665
           GGG    G GG   P      P  P   F+++  PPPF+
Sbjct: 124 GGGWQQGGGGGGAYPTPPPPNPFLPYFPFYYYSPPPPFY 162


>08_01_0420 +
           3726392-3727116,3727450-3727648,3727787-3727879,
           3728001-3728129,3728445-3728498,3728597-3728674,
           3728773-3728835,3729101-3729213,3729392-3729500
          Length = 520

 Score = 28.7 bits (61), Expect = 7.9
 Identities = 12/23 (52%), Positives = 12/23 (52%)
 Frame = +2

Query: 554 GGGGXFXGGGGXXXXPXFXPPPP 622
           GGGG   GGGG      F PP P
Sbjct: 36  GGGGGGGGGGGGGDAMSFAPPAP 58


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,388,353
Number of Sequences: 37544
Number of extensions: 399939
Number of successful extensions: 3008
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1123
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2721
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 3010688180
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)