Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP16_F_O07
(858 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
05_06_0234 - 26602660-26602728,26602814-26602988,26603077-266031... 45 9e-05
06_01_0356 + 2557127-2557193,2557272-2557315,2557433-2557528,255... 42 8e-04
01_06_0465 - 29573972-29574110,29574300-29574343,29574434-295746... 36 0.041
06_03_0740 - 24006485-24006629,24006821-24006864,24006954-240071... 36 0.055
07_03_1756 - 29239137-29239325,29239741-29240259,29240693-292408... 29 6.3
04_04_0466 + 25433678-25434007,25434118-25434176,25434345-254344... 29 6.3
02_02_0456 + 10489544-10491064,10491506-10491632,10491633-10492606 28 8.3
01_01_0972 + 7672048-7672390,7672546-7672709,7672864-7672961,767... 28 8.3
>05_06_0234 -
26602660-26602728,26602814-26602988,26603077-26603120,
26603204-26603381,26603468-26603652,26603737-26603801,
26603985-26604066,26604342-26604434,26605096-26605191,
26605312-26605355,26605467-26605530
Length = 364
Score = 44.8 bits (101), Expect = 9e-05
Identities = 23/64 (35%), Positives = 31/64 (48%)
Frame = +1
Query: 286 HAEAMASLPPNVRRRIRALRTLQKEFVDIEAKFYSEVHAXXXXXXXXXXXXXXXRALIVN 465
H + + SL P VR+R+ LR +Q + D+EAKF+ E A R IVN
Sbjct: 46 HTDVLESLEPKVRKRVEVLREIQSQHDDLEAKFFEERAALEAKYQKMYEPLYSKRYEIVN 105
Query: 466 GTYE 477
G E
Sbjct: 106 GVVE 109
>06_01_0356 +
2557127-2557193,2557272-2557315,2557433-2557528,
2559259-2559351,2559450-2559540,2559617-2559678,
2559754-2559938,2560022-2560199,2560293-2560336,
2560440-2560635,2560728-2560745,2560955-2561005
Length = 374
Score = 41.5 bits (93), Expect = 8e-04
Identities = 22/64 (34%), Positives = 31/64 (48%)
Frame = +1
Query: 286 HAEAMASLPPNVRRRIRALRTLQKEFVDIEAKFYSEVHAXXXXXXXXXXXXXXXRALIVN 465
H + + +L PNVR+R+ LR +Q + +IE KF+ E A R IVN
Sbjct: 47 HTDVLEALSPNVRKRVEYLREIQGQHDEIELKFFEERAALEAKYQKLYEPLYTKRYNIVN 106
Query: 466 GTYE 477
G E
Sbjct: 107 GVVE 110
>01_06_0465 -
29573972-29574110,29574300-29574343,29574434-29574602,
29574707-29574894,29575081-29575145,29575257-29575311,
29575502-29575594,29576035-29576130,29576259-29576302,
29576419-29576431
Length = 301
Score = 35.9 bits (79), Expect = 0.041
Identities = 20/64 (31%), Positives = 30/64 (46%)
Frame = +1
Query: 286 HAEAMASLPPNVRRRIRALRTLQKEFVDIEAKFYSEVHAXXXXXXXXXXXXXXXRALIVN 465
H + + SL P VR+R+ L +Q + ++EAKF E A R+ IV+
Sbjct: 29 HVDVLESLAPVVRKRVDVLIEIQSQHDELEAKFLEEKAALEANYQKLYGPLYSKRSEIVS 88
Query: 466 GTYE 477
G E
Sbjct: 89 GVLE 92
>06_03_0740 -
24006485-24006629,24006821-24006864,24006954-24007122,
24007226-24007413,24007572-24007634,24007992-24008084,
24009837-24009932,24010024-24010067,24010184-24010357,
24010764-24010974
Length = 408
Score = 35.5 bits (78), Expect = 0.055
Identities = 13/36 (36%), Positives = 23/36 (63%)
Frame = +1
Query: 286 HAEAMASLPPNVRRRIRALRTLQKEFVDIEAKFYSE 393
H + + SL P+VR+R+ L +Q + ++E KF+ E
Sbjct: 153 HVDVLESLAPSVRKRVDVLMEIQSQHDELEVKFFEE 188
>07_03_1756 -
29239137-29239325,29239741-29240259,29240693-29240800,
29240856-29241155,29241730-29241831,29243042-29243209,
29243878-29243991,29244184-29244288,29244372-29244502,
29244794-29244918,29245001-29245172,29245277-29245316,
29245636-29245722,29245803-29245868,29246412-29246510,
29246714-29246836,29247066-29247107,29247195-29247260,
29247362-29247553,29247672-29247737,29248839-29249141
Length = 1038
Score = 28.7 bits (61), Expect = 6.3
Identities = 15/41 (36%), Positives = 23/41 (56%)
Frame = +1
Query: 451 ALIVNGTYEPNDDECLNPWRDDTEEEELARAVQNAAITEGE 573
A IV + EPN + N +D+T E+ A +NAA+T +
Sbjct: 685 AAIVTASEEPNGGDSANKLKDETMEDP---ATENAAMTNAD 722
>04_04_0466 +
25433678-25434007,25434118-25434176,25434345-25434426,
25435024-25435122,25435750-25435831,25436759-25436823,
25437241-25438308,25438369-25438446,25438550-25438596,
25438734-25438779,25438871-25438950,25439050-25439166,
25439842-25439923,25440156-25440281,25440415-25440489,
25440743-25440868,25441542-25441646
Length = 888
Score = 28.7 bits (61), Expect = 6.3
Identities = 14/48 (29%), Positives = 26/48 (54%)
Frame = -1
Query: 393 FTVKLGLNVDKLLLKSSQGADSPTNIRG*GCHRFCMKAICDGRYHFIT 250
FT + L+ + LL ++ A+ T + G C++++CDG H +T
Sbjct: 177 FTFNISLSRENLLQVAAWDANLVTPHKRMGNAGLCLESLCDGSNHNVT 224
>02_02_0456 + 10489544-10491064,10491506-10491632,10491633-10492606
Length = 873
Score = 28.3 bits (60), Expect = 8.3
Identities = 23/87 (26%), Positives = 44/87 (50%), Gaps = 4/87 (4%)
Frame = +1
Query: 154 VTTTHPKWS-LQKKKKSSEVVN*RNT*--LKSGVTRN-EMIAAITNRLHAEAMASLPPNV 321
++T H +WS Q++K E++ +++ L+ + N ++I R+H +A+L PN+
Sbjct: 27 LSTLHSRWSGKQQQKLQGELLQLQSSLQRLRDTLPANYDLIDRAEWRIHKHCVANLLPNI 86
Query: 322 RRRIRALRTLQKEFVDIEAKFYSEVHA 402
+ + L EF E K E +A
Sbjct: 87 KDAVYNADDLLDEFRWYEQKVALESNA 113
>01_01_0972 +
7672048-7672390,7672546-7672709,7672864-7672961,
7673040-7673361,7674021-7675220
Length = 708
Score = 28.3 bits (60), Expect = 8.3
Identities = 13/33 (39%), Positives = 18/33 (54%), Gaps = 1/33 (3%)
Frame = -1
Query: 303 CHRFCMKA-ICDGRYHFITGHATFQSGVALVHH 208
C +F ++ I + R HF+ G A Q V L HH
Sbjct: 673 CMKFLSRSQIQEVRQHFVLGAADIQPAVTLTHH 705
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,647,569
Number of Sequences: 37544
Number of extensions: 377563
Number of successful extensions: 983
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 942
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 981
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2397465936
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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