Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP16_F_O02
         (850 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Y18448-1|CAA77176.1| 3851|Homo sapiens Bassoon protein protein.        30   9.2  
AF052224-1|AAC83555.1| 3926|Homo sapiens neuronal double zinc fi...    30   9.2  
AB007894-1|BAA23707.1| 1571|Homo sapiens KIAA0434 protein.             30   9.2  

>Y18448-1|CAA77176.1| 3851|Homo sapiens Bassoon protein protein.
          Length = 3851

 Score = 30.3 bits (65), Expect = 9.2
 Identities = 24/82 (29%), Positives = 34/82 (41%), Gaps = 3/82 (3%)
 Frame = -2

Query: 750  DTXSVSXEXSXTLPEGRRXDRV---SGKRPGSEPGERTRELPGGXGVXSL*SCRVXXTSD 580
            D   ++ + + T P+ +R + +   S  RPG EPGE     PG     +L  C      +
Sbjct: 3161 DISELTKDSTSTAPDSQRLEPLGPGSSGRPGKEPGE-----PGVLDGPTLPCCYARGEEE 3215

Query: 579  LXVDFCDARSGGRSLWXNASNG 514
               D  D R  G  L    SNG
Sbjct: 3216 SEEDSYDPRGKGGHLRSMESNG 3237


>AF052224-1|AAC83555.1| 3926|Homo sapiens neuronal double zinc finger
            protein protein.
          Length = 3926

 Score = 30.3 bits (65), Expect = 9.2
 Identities = 24/82 (29%), Positives = 34/82 (41%), Gaps = 3/82 (3%)
 Frame = -2

Query: 750  DTXSVSXEXSXTLPEGRRXDRV---SGKRPGSEPGERTRELPGGXGVXSL*SCRVXXTSD 580
            D   ++ + + T P+ +R + +   S  RPG EPGE     PG     +L  C      +
Sbjct: 3236 DISELTKDSTSTAPDSQRLEPLGPGSSGRPGKEPGE-----PGVLDGPTLPCCYARGEEE 3290

Query: 579  LXVDFCDARSGGRSLWXNASNG 514
               D  D R  G  L    SNG
Sbjct: 3291 SEEDSYDPRGKGGHLRSMESNG 3312


>AB007894-1|BAA23707.1| 1571|Homo sapiens KIAA0434 protein.
          Length = 1571

 Score = 30.3 bits (65), Expect = 9.2
 Identities = 24/82 (29%), Positives = 34/82 (41%), Gaps = 3/82 (3%)
 Frame = -2

Query: 750  DTXSVSXEXSXTLPEGRRXDRV---SGKRPGSEPGERTRELPGGXGVXSL*SCRVXXTSD 580
            D   ++ + + T P+ +R + +   S  RPG EPGE     PG     +L  C      +
Sbjct: 881  DISELTKDSTSTAPDSQRLEPLGPGSSGRPGKEPGE-----PGVLDGPTLPCCYARGEEE 935

Query: 579  LXVDFCDARSGGRSLWXNASNG 514
               D  D R  G  L    SNG
Sbjct: 936  SEEDSYDPRGKGGHLRSMESNG 957


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 106,762,967
Number of Sequences: 237096
Number of extensions: 2054196
Number of successful extensions: 4582
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 4334
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4582
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10761200974
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)