Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP16_F_N24
(942 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U50311-12|AAA92315.1| 169|Caenorhabditis elegans Hypothetical p... 38 0.008
U42830-3|AAC48275.1| 195|Caenorhabditis elegans Hypothetical pr... 33 0.22
Z77655-1|CAB01137.1| 393|Caenorhabditis elegans Hypothetical pr... 31 1.2
Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical pr... 31 1.6
Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical pr... 31 1.6
Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical pr... 31 1.6
Z81573-3|CAB04624.3| 398|Caenorhabditis elegans Hypothetical pr... 30 2.1
U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (gr... 30 2.8
U23515-9|AAP82644.1| 360|Caenorhabditis elegans Hypothetical pr... 30 2.8
U23515-8|AAP82645.1| 362|Caenorhabditis elegans Hypothetical pr... 30 2.8
AC024838-7|AAF60820.1| 381|Caenorhabditis elegans Hypothetical ... 30 2.8
AC024838-3|AAF60821.1| 381|Caenorhabditis elegans Hypothetical ... 30 2.8
Z93393-1|CAB07688.1| 497|Caenorhabditis elegans Hypothetical pr... 29 4.8
U07628-1|AAA17738.1| 515|Caenorhabditis elegans APX-1 protein. 28 8.4
AF101319-2|AAC69353.4| 515|Caenorhabditis elegans Anterior phar... 28 8.4
>U50311-12|AAA92315.1| 169|Caenorhabditis elegans Hypothetical
protein C25E10.10 protein.
Length = 169
Score = 38.3 bits (85), Expect = 0.008
Identities = 25/67 (37%), Positives = 34/67 (50%), Gaps = 3/67 (4%)
Frame = +3
Query: 150 PTRKCP-KGEHSVLYCPQMAEPDC--ENPEVHDFVDHVGPCDVPQCFCDRPNVRNTKTGK 320
P RK +G+ + C EP C ENPE D V C C C + VR++ TGK
Sbjct: 71 PIRKPECEGDEELKACGSACEPTCDNENPEC-DLV-----CMTNVCQCKKGLVRDSATGK 124
Query: 321 CVPESEC 341
CV +++C
Sbjct: 125 CVEKNKC 131
>U42830-3|AAC48275.1| 195|Caenorhabditis elegans Hypothetical
protein C53B7.2 protein.
Length = 195
Score = 33.5 bits (73), Expect = 0.22
Identities = 17/50 (34%), Positives = 23/50 (46%)
Frame = +3
Query: 192 CPQMAEPDCENPEVHDFVDHVGPCDVPQCFCDRPNVRNTKTGKCVPESEC 341
C QM P CE+P VD C P C C P + + +C+P + C
Sbjct: 38 CTQMCPPTCESPNPQCRVD----CTRPSCTC-LPGHVYSNSRQCIPANSC 82
>Z77655-1|CAB01137.1| 393|Caenorhabditis elegans Hypothetical
protein C56A3.1 protein.
Length = 393
Score = 31.1 bits (67), Expect = 1.2
Identities = 12/19 (63%), Positives = 12/19 (63%)
Frame = -1
Query: 756 VXXXGGGCXXGGXGGAGGG 700
V GGGC GG GG GGG
Sbjct: 83 VQSGGGGCGGGGCGGGGGG 101
Score = 30.7 bits (66), Expect = 1.6
Identities = 11/15 (73%), Positives = 11/15 (73%)
Frame = -1
Query: 744 GGGCXXGGXGGAGGG 700
GGGC GG GG GGG
Sbjct: 105 GGGCGGGGGGGCGGG 119
Score = 30.7 bits (66), Expect = 1.6
Identities = 11/15 (73%), Positives = 11/15 (73%)
Frame = -1
Query: 744 GGGCXXGGXGGAGGG 700
GGGC GG GG GGG
Sbjct: 113 GGGCGGGGGGGCGGG 127
Score = 28.3 bits (60), Expect = 8.4
Identities = 10/14 (71%), Positives = 10/14 (71%)
Frame = -1
Query: 744 GGGCXXGGXGGAGG 703
GGGC GG GG GG
Sbjct: 121 GGGCGGGGGGGGGG 134
>Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical
protein E02A10.2 protein.
Length = 385
Score = 30.7 bits (66), Expect = 1.6
Identities = 11/15 (73%), Positives = 11/15 (73%)
Frame = -1
Query: 744 GGGCXXGGXGGAGGG 700
GGGC GG GG GGG
Sbjct: 130 GGGCGGGGGGGCGGG 144
Score = 30.7 bits (66), Expect = 1.6
Identities = 11/15 (73%), Positives = 11/15 (73%)
Frame = -1
Query: 744 GGGCXXGGXGGAGGG 700
GGGC GG GG GGG
Sbjct: 138 GGGCGGGGGGGCGGG 152
Score = 30.7 bits (66), Expect = 1.6
Identities = 11/15 (73%), Positives = 11/15 (73%)
Frame = -1
Query: 744 GGGCXXGGXGGAGGG 700
GGGC GG GG GGG
Sbjct: 167 GGGCGGGGGGGCGGG 181
Score = 30.7 bits (66), Expect = 1.6
Identities = 11/15 (73%), Positives = 11/15 (73%)
Frame = -1
Query: 744 GGGCXXGGXGGAGGG 700
GGGC GG GG GGG
Sbjct: 175 GGGCGGGGGGGCGGG 189
>Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 30.7 bits (66), Expect = 1.6
Identities = 11/15 (73%), Positives = 11/15 (73%)
Frame = -1
Query: 744 GGGCXXGGXGGAGGG 700
GGGC GG GG GGG
Sbjct: 128 GGGCGGGGGGGCGGG 142
Score = 30.7 bits (66), Expect = 1.6
Identities = 11/15 (73%), Positives = 11/15 (73%)
Frame = -1
Query: 744 GGGCXXGGXGGAGGG 700
GGGC GG GG GGG
Sbjct: 160 GGGCGGGGGGGCGGG 174
Score = 28.3 bits (60), Expect = 8.4
Identities = 10/15 (66%), Positives = 10/15 (66%)
Frame = -1
Query: 744 GGGCXXGGXGGAGGG 700
GGGC G GG GGG
Sbjct: 136 GGGCGGGSSGGCGGG 150
Score = 28.3 bits (60), Expect = 8.4
Identities = 10/14 (71%), Positives = 10/14 (71%)
Frame = -1
Query: 741 GGCXXGGXGGAGGG 700
GGC GG GG GGG
Sbjct: 153 GGCGGGGGGGCGGG 166
>Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 30.7 bits (66), Expect = 1.6
Identities = 11/15 (73%), Positives = 11/15 (73%)
Frame = -1
Query: 744 GGGCXXGGXGGAGGG 700
GGGC GG GG GGG
Sbjct: 128 GGGCGGGGGGGCGGG 142
Score = 30.7 bits (66), Expect = 1.6
Identities = 11/15 (73%), Positives = 11/15 (73%)
Frame = -1
Query: 744 GGGCXXGGXGGAGGG 700
GGGC GG GG GGG
Sbjct: 160 GGGCGGGGGGGCGGG 174
Score = 28.3 bits (60), Expect = 8.4
Identities = 10/15 (66%), Positives = 10/15 (66%)
Frame = -1
Query: 744 GGGCXXGGXGGAGGG 700
GGGC G GG GGG
Sbjct: 136 GGGCGGGSSGGCGGG 150
Score = 28.3 bits (60), Expect = 8.4
Identities = 10/14 (71%), Positives = 10/14 (71%)
Frame = -1
Query: 741 GGCXXGGXGGAGGG 700
GGC GG GG GGG
Sbjct: 153 GGCGGGGGGGCGGG 166
>Z81573-3|CAB04624.3| 398|Caenorhabditis elegans Hypothetical
protein M02G9.2 protein.
Length = 398
Score = 30.3 bits (65), Expect = 2.1
Identities = 20/66 (30%), Positives = 27/66 (40%)
Frame = +3
Query: 162 CPKGEHSVLYCPQMAEPDCENPEVHDFVDHVGPCDVPQCFCDRPNVRNTKTGKCVPESEC 341
C GE C M P+ ++ + P P+C C NVRN TG +P
Sbjct: 30 CTPGEAPKCGCQVMPTPEIGGGQM---ICTCSPPVPPKCVCTEGNVRNIITGPSLPALFK 86
Query: 342 **NCVN 359
NCV+
Sbjct: 87 PYNCVS 92
>U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (grd
related) protein 4 protein.
Length = 210
Score = 29.9 bits (64), Expect = 2.8
Identities = 10/15 (66%), Positives = 10/15 (66%)
Frame = +2
Query: 701 PPPAPPXPPXXHPPP 745
PPP PP PP PPP
Sbjct: 64 PPPPPPPPPMCPPPP 78
Score = 29.5 bits (63), Expect = 3.6
Identities = 10/15 (66%), Positives = 10/15 (66%)
Frame = +2
Query: 701 PPPAPPXPPXXHPPP 745
PPP PP PP PPP
Sbjct: 63 PPPPPPPPPPMCPPP 77
>U23515-9|AAP82644.1| 360|Caenorhabditis elegans Hypothetical
protein R144.4a protein.
Length = 360
Score = 29.9 bits (64), Expect = 2.8
Identities = 10/15 (66%), Positives = 10/15 (66%)
Frame = +2
Query: 701 PPPAPPXPPXXHPPP 745
PPP PP PP PPP
Sbjct: 2 PPPPPPPPPPPPPPP 16
Score = 29.9 bits (64), Expect = 2.8
Identities = 10/15 (66%), Positives = 10/15 (66%)
Frame = +2
Query: 701 PPPAPPXPPXXHPPP 745
PPP PP PP PPP
Sbjct: 3 PPPPPPPPPPPPPPP 17
>U23515-8|AAP82645.1| 362|Caenorhabditis elegans Hypothetical
protein R144.4b protein.
Length = 362
Score = 29.9 bits (64), Expect = 2.8
Identities = 10/15 (66%), Positives = 10/15 (66%)
Frame = +2
Query: 701 PPPAPPXPPXXHPPP 745
PPP PP PP PPP
Sbjct: 2 PPPPPPPPPPPPPPP 16
Score = 29.9 bits (64), Expect = 2.8
Identities = 10/15 (66%), Positives = 10/15 (66%)
Frame = +2
Query: 701 PPPAPPXPPXXHPPP 745
PPP PP PP PPP
Sbjct: 3 PPPPPPPPPPPPPPP 17
>AC024838-7|AAF60820.1| 381|Caenorhabditis elegans Hypothetical
protein Y59E9AL.2 protein.
Length = 381
Score = 29.9 bits (64), Expect = 2.8
Identities = 10/15 (66%), Positives = 10/15 (66%)
Frame = +2
Query: 701 PPPAPPXPPXXHPPP 745
PPP PP PP PPP
Sbjct: 184 PPPPPPIPPPGPPPP 198
>AC024838-3|AAF60821.1| 381|Caenorhabditis elegans Hypothetical
protein Y59E9AL.3 protein.
Length = 381
Score = 29.9 bits (64), Expect = 2.8
Identities = 10/15 (66%), Positives = 10/15 (66%)
Frame = +2
Query: 701 PPPAPPXPPXXHPPP 745
PPP PP PP PPP
Sbjct: 184 PPPPPPIPPPGPPPP 198
>Z93393-1|CAB07688.1| 497|Caenorhabditis elegans Hypothetical
protein Y48E1B.1 protein.
Length = 497
Score = 29.1 bits (62), Expect = 4.8
Identities = 10/14 (71%), Positives = 10/14 (71%)
Frame = +2
Query: 704 PPAPPXPPXXHPPP 745
PPAPP PP PPP
Sbjct: 354 PPAPPPPPPPPPPP 367
>U07628-1|AAA17738.1| 515|Caenorhabditis elegans APX-1 protein.
Length = 515
Score = 28.3 bits (60), Expect = 8.4
Identities = 20/64 (31%), Positives = 27/64 (42%), Gaps = 3/64 (4%)
Frame = +3
Query: 177 HSVLYCPQ-MAEPDCENPEVHDFVDHVGPCDVP-QCFCDRPNVRNTKTGKCVPESEC-** 347
H V C + DC NP + G C P QC C T+ +C+P + C
Sbjct: 158 HGVRRCSAGWSGEDCSNPICAGGCSNRGRCVAPNQCSC-ADGFNGTRCEQCLPRAGCVNG 216
Query: 348 NCVN 359
+CVN
Sbjct: 217 DCVN 220
>AF101319-2|AAC69353.4| 515|Caenorhabditis elegans Anterior pharynx
in excess protein1 protein.
Length = 515
Score = 28.3 bits (60), Expect = 8.4
Identities = 20/64 (31%), Positives = 27/64 (42%), Gaps = 3/64 (4%)
Frame = +3
Query: 177 HSVLYCPQ-MAEPDCENPEVHDFVDHVGPCDVP-QCFCDRPNVRNTKTGKCVPESEC-** 347
H V C + DC NP + G C P QC C T+ +C+P + C
Sbjct: 158 HGVRRCSAGWSGEDCSNPICAGGCSNRGRCVAPNQCSC-ADGFNGTRCEQCLPRAGCVNG 216
Query: 348 NCVN 359
+CVN
Sbjct: 217 DCVN 220
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,132,865
Number of Sequences: 27780
Number of extensions: 252344
Number of successful extensions: 2176
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 1040
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1962
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2433684176
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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