Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP16_F_N23
(870 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL132865-1|CAB60595.1| 110|Caenorhabditis elegans Hypothetical ... 76 4e-14
U97194-7|AAB52450.2| 107|Caenorhabditis elegans Hypothetical pr... 74 2e-13
Z70752-5|CAA94758.1| 901|Caenorhabditis elegans Hypothetical pr... 31 0.81
Z70750-16|CAA94750.1| 901|Caenorhabditis elegans Hypothetical p... 31 0.81
AF106584-6|AAC78220.1| 424|Caenorhabditis elegans Hypothetical ... 31 0.81
U53153-9|AAC69041.1| 511|Caenorhabditis elegans Hypothetical pr... 29 4.3
U39852-1|AAK39256.2| 2314|Caenorhabditis elegans Hypothetical pr... 29 4.3
Z75956-2|CAJ90493.2| 384|Caenorhabditis elegans Hypothetical pr... 28 10.0
Z75956-1|CAB00128.2| 489|Caenorhabditis elegans Hypothetical pr... 28 10.0
>AL132865-1|CAB60595.1| 110|Caenorhabditis elegans Hypothetical
protein Y62E10A.1 protein.
Length = 110
Score = 75.8 bits (178), Expect = 4e-14
Identities = 46/112 (41%), Positives = 55/112 (49%)
Frame = +2
Query: 119 MRYVAAYLLAVLGGKTTPAAADVEKILSSVGIEADGEKLKKVITELNGKDVEQLIAAGRE 298
MRYV+AYLLAVLGG P D++ ILS+VG++AD E K V++ L GK VE+LIA G
Sbjct: 1 MRYVSAYLLAVLGGNANPKVDDLKNILSAVGVDADAETAKLVVSRLAGKTVEELIAEGSA 60
Query: 299 KLSSMPVGGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMGFGLFD 454
L S V GG MGFGLFD
Sbjct: 61 GLVS--VSGGAAPAAAAAPAAGGAAPAADSKPAKKEEPKEESDDDMGFGLFD 110
>U97194-7|AAB52450.2| 107|Caenorhabditis elegans Hypothetical
protein C37A2.7 protein.
Length = 107
Score = 73.7 bits (173), Expect = 2e-13
Identities = 33/69 (47%), Positives = 47/69 (68%)
Frame = +2
Query: 119 MRYVAAYLLAVLGGKTTPAAADVEKILSSVGIEADGEKLKKVITELNGKDVEQLIAAGRE 298
M+Y+ AYLLA LGG +P+A DV K+L + G++ D E V+ L GK + ++IA G+
Sbjct: 1 MKYLGAYLLATLGGNASPSAQDVLKVLEAGGLDCDMENANSVVDALKGKTISEVIAQGKV 60
Query: 299 KLSSMPVGG 325
KLSS+P GG
Sbjct: 61 KLSSVPSGG 69
>Z70752-5|CAA94758.1| 901|Caenorhabditis elegans Hypothetical
protein F25B3.1 protein.
Length = 901
Score = 31.5 bits (68), Expect = 0.81
Identities = 16/41 (39%), Positives = 26/41 (63%), Gaps = 1/41 (2%)
Frame = +2
Query: 164 TTPAAADVEKILSSVGIEADGEKLKKVITEL-NGKDVEQLI 283
+TPA+A +I + GI EK+ +ITE+ N KD+E+ +
Sbjct: 444 STPASASDHRISRTFGINESEEKVVAMITEIRNQKDLEEAV 484
>Z70750-16|CAA94750.1| 901|Caenorhabditis elegans Hypothetical
protein F25B3.1 protein.
Length = 901
Score = 31.5 bits (68), Expect = 0.81
Identities = 16/41 (39%), Positives = 26/41 (63%), Gaps = 1/41 (2%)
Frame = +2
Query: 164 TTPAAADVEKILSSVGIEADGEKLKKVITEL-NGKDVEQLI 283
+TPA+A +I + GI EK+ +ITE+ N KD+E+ +
Sbjct: 444 STPASASDHRISRTFGINESEEKVVAMITEIRNQKDLEEAV 484
>AF106584-6|AAC78220.1| 424|Caenorhabditis elegans Hypothetical
protein F54A5.1 protein.
Length = 424
Score = 31.5 bits (68), Expect = 0.81
Identities = 20/57 (35%), Positives = 28/57 (49%)
Frame = -1
Query: 327 PPPTGIDDSFSRPAAISCSTSLPLSSVITFLSFSPSASIPTELRIFSTSAAAGVVLP 157
P P SRP+AI +TS S + + PS S P+ L +F+ + GV LP
Sbjct: 340 PSPAVSTFEVSRPSAIISATSSTTSPISIPATIIPSVS-PSALELFAMAQQLGVQLP 395
>U53153-9|AAC69041.1| 511|Caenorhabditis elegans Hypothetical
protein T19A5.5 protein.
Length = 511
Score = 29.1 bits (62), Expect = 4.3
Identities = 12/36 (33%), Positives = 16/36 (44%)
Frame = +3
Query: 45 SC*RLFKTNVILSALHVSCQLGLKKCVTWPRIYWLC 152
+C F+ + H CQ G +CV PR W C
Sbjct: 40 ACAAFFRRVFVTHKQHFKCQTGQNQCVPDPRGRWNC 75
>U39852-1|AAK39256.2| 2314|Caenorhabditis elegans Hypothetical protein
K10C2.1 protein.
Length = 2314
Score = 29.1 bits (62), Expect = 4.3
Identities = 19/59 (32%), Positives = 32/59 (54%)
Frame = -1
Query: 279 SCSTSLPLSSVITFLSFSPSASIPTELRIFSTSAAAGVVLPPSTASKYAAT*RIF*VLI 103
S +T+ P ++T + P +S PT + ST+ AA V+ T+S + + +F VLI
Sbjct: 2254 SVATAGPTGPILTVV---PVSSAPTSGAVSSTATAAPVITTTKTSSVLSVSFSMFIVLI 2309
>Z75956-2|CAJ90493.2| 384|Caenorhabditis elegans Hypothetical
protein R31.2b protein.
Length = 384
Score = 27.9 bits (59), Expect = 10.0
Identities = 18/66 (27%), Positives = 31/66 (46%)
Frame = +2
Query: 53 TFVQDERYSFGITRFVSIRT*KMRYVAAYLLAVLGGKTTPAAADVEKILSSVGIEADGEK 232
T+ R SF TRF+ +RT + Y L P +DVE++ +++ G+K
Sbjct: 64 TYSYGRRDSFNKTRFLLVRTSVEKGKETYKRVTL-----PGGSDVERLKTTIEKACKGKK 118
Query: 233 LKKVIT 250
+ + T
Sbjct: 119 VDMIFT 124
>Z75956-1|CAB00128.2| 489|Caenorhabditis elegans Hypothetical
protein R31.2a protein.
Length = 489
Score = 27.9 bits (59), Expect = 10.0
Identities = 18/66 (27%), Positives = 31/66 (46%)
Frame = +2
Query: 53 TFVQDERYSFGITRFVSIRT*KMRYVAAYLLAVLGGKTTPAAADVEKILSSVGIEADGEK 232
T+ R SF TRF+ +RT + Y L P +DVE++ +++ G+K
Sbjct: 169 TYSYGRRDSFNKTRFLLVRTSVEKGKETYKRVTL-----PGGSDVERLKTTIEKACKGKK 223
Query: 233 LKKVIT 250
+ + T
Sbjct: 224 VDMIFT 229
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,494,166
Number of Sequences: 27780
Number of extensions: 181068
Number of successful extensions: 541
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 507
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 539
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2181923744
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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