Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP16_F_N22
(879 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U88169-6|AAB42236.2| 216|Caenorhabditis elegans Hypothetical pr... 153 2e-37
U88169-7|ABQ13064.1| 205|Caenorhabditis elegans Hypothetical pr... 152 3e-37
Z50873-2|CAA90759.2| 620|Caenorhabditis elegans Hypothetical pr... 86 4e-17
Z50873-1|CAA90760.2| 961|Caenorhabditis elegans Hypothetical pr... 86 4e-17
X92565-1|CAA63315.1| 620|Caenorhabditis elegans LIN-2B protein. 86 4e-17
X92564-1|CAA63314.1| 961|Caenorhabditis elegans LIN-2A protein. 86 4e-17
U53147-4|AAA96115.1| 668|Caenorhabditis elegans Temporarily ass... 85 8e-17
U39742-7|AAK39197.2| 967|Caenorhabditis elegans Drosophila disc... 81 1e-15
AJ295228-1|CAC35153.1| 967|Caenorhabditis elegans MAGUK protein... 81 1e-15
AF406786-1|AAL01376.1| 967|Caenorhabditis elegans SAP97-like pr... 81 1e-15
AC024824-6|AAK85504.2| 567|Caenorhabditis elegans Hypothetical ... 76 4e-14
U80445-11|AAB37801.2| 479|Caenorhabditis elegans Hypothetical p... 71 1e-12
Z68750-3|CAA92964.2| 1092|Caenorhabditis elegans Hypothetical pr... 54 2e-07
Z70307-13|CAA94339.1| 354|Caenorhabditis elegans Hypothetical p... 33 0.27
Z81130-10|CAB03418.1| 653|Caenorhabditis elegans Hypothetical p... 33 0.36
Z81130-9|CAI70413.1| 616|Caenorhabditis elegans Hypothetical pr... 33 0.36
U80440-1|AAK21472.1| 4568|Caenorhabditis elegans Dynein heavy ch... 31 0.82
L33260-1|AAC37251.1| 4568|Caenorhabditis elegans dynein heavy ch... 31 0.82
Z93395-6|CAB07708.1| 3375|Caenorhabditis elegans Hypothetical pr... 31 1.4
Z93375-8|CAB07569.1| 3375|Caenorhabditis elegans Hypothetical pr... 31 1.4
Z73971-10|CAA98251.1| 838|Caenorhabditis elegans Hypothetical p... 31 1.4
Z70265-1|CAA94202.1| 1283|Caenorhabditis elegans Hypothetical pr... 31 1.4
U33934-1|AAA96507.1| 838|Caenorhabditis elegans MEC-9L protein. 31 1.4
U33933-1|AAA96506.1| 838|Caenorhabditis elegans MEC-9L protein. 31 1.4
AL132949-7|CAB61080.1| 1168|Caenorhabditis elegans Hypothetical ... 31 1.4
AF132883-1|AAD25092.1| 925|Caenorhabditis elegans UNC-52/Perlec... 31 1.4
Z48585-2|CAA88479.1| 222|Caenorhabditis elegans Hypothetical pr... 30 1.9
AC025721-7|AAK29911.3| 668|Caenorhabditis elegans Half transpor... 30 1.9
AF106573-7|AAC78158.1| 838|Caenorhabditis elegans Hypothetical ... 30 2.5
AF059715-1|AAF05624.1| 813|Caenorhabditis elegans cell survival... 30 2.5
Z82059-12|CAB04880.1| 622|Caenorhabditis elegans Hypothetical p... 29 4.4
Z77666-6|CAB01232.1| 1321|Caenorhabditis elegans Hypothetical pr... 29 4.4
Z75537-2|CAA99835.1| 622|Caenorhabditis elegans Hypothetical pr... 29 4.4
X65054-1|CAA46190.1| 1321|Caenorhabditis elegans P-glycoprotein ... 29 4.4
U20783-1|AAC46845.1| 535|Caenorhabditis elegans unknown protein. 29 4.4
AL117203-4|CAB55106.2| 813|Caenorhabditis elegans Hypothetical ... 29 4.4
AL117200-9|CAB60586.1| 807|Caenorhabditis elegans Hypothetical ... 29 4.4
AL032665-2|CAA21772.1| 622|Caenorhabditis elegans Hypothetical ... 29 4.4
U40959-3|AAA81767.2| 445|Caenorhabditis elegans Hypothetical pr... 29 5.8
U28928-7|AAA68339.1| 665|Caenorhabditis elegans Peroxisomal mem... 29 5.8
>U88169-6|AAB42236.2| 216|Caenorhabditis elegans Hypothetical
protein T03F1.8a protein.
Length = 216
Score = 153 bits (371), Expect = 2e-37
Identities = 78/155 (50%), Positives = 102/155 (65%), Gaps = 1/155 (0%)
Frame = +2
Query: 272 VQKGP-RPLVLCGPSGSGKSTLLKRLLKEFPDKFGFSVSHTTRAPRAGEKNGVHYHFTNL 448
++K P RP+VL GPSG GKST+L R ++E+P+ F FSVSHTTR PRAGE++G HY+FT
Sbjct: 19 IRKMPCRPIVLSGPSGGGKSTILTRAMQEYPNSFAFSVSHTTRQPRAGEEHGKHYYFTEK 78
Query: 449 NDMSTAIEKGEFIETAIFSGNIYGTSKKAVDDVRRTGQICVLDIEMEGVKQIKRTDLDPL 628
M I+ EF+E A FSGN YGTSKK V ++ +G+ICVLDIE++GV+ IK + LD
Sbjct: 79 EKMQEMIKNNEFLEFATFSGNTYGTSKKTVLEIENSGKICVLDIELQGVRNIKNSHLDAR 138
Query: 629 VGLCDATIYR*TWNXDSAPXNTEQEDXLXKRLETA 733
L A + TE E+ L KRL+ A
Sbjct: 139 YILIRAPSIK-LLEERLRARGTETEESLSKRLQHA 172
>U88169-7|ABQ13064.1| 205|Caenorhabditis elegans Hypothetical
protein T03F1.8b protein.
Length = 205
Score = 152 bits (369), Expect = 3e-37
Identities = 76/149 (51%), Positives = 98/149 (65%)
Frame = +2
Query: 287 RPLVLCGPSGSGKSTLLKRLLKEFPDKFGFSVSHTTRAPRAGEKNGVHYHFTNLNDMSTA 466
RP+VL GPSG GKST+L R ++E+P+ F FSVSHTTR PRAGE++G HY+FT M
Sbjct: 14 RPIVLSGPSGGGKSTILTRAMQEYPNSFAFSVSHTTRQPRAGEEHGKHYYFTEKEKMQEM 73
Query: 467 IEKGEFIETAIFSGNIYGTSKKAVDDVRRTGQICVLDIEMEGVKQIKRTDLDPLVGLCDA 646
I+ EF+E A FSGN YGTSKK V ++ +G+ICVLDIE++GV+ IK + LD L A
Sbjct: 74 IKNNEFLEFATFSGNTYGTSKKTVLEIENSGKICVLDIELQGVRNIKNSHLDARYILIRA 133
Query: 647 TIYR*TWNXDSAPXNTEQEDXLXKRLETA 733
+ TE E+ L KRL+ A
Sbjct: 134 PSIK-LLEERLRARGTETEESLSKRLQHA 161
>Z50873-2|CAA90759.2| 620|Caenorhabditis elegans Hypothetical
protein F17E5.1b protein.
Length = 620
Score = 85.8 bits (203), Expect = 4e-17
Identities = 35/115 (30%), Positives = 64/115 (55%)
Frame = +2
Query: 287 RPLVLCGPSGSGKSTLLKRLLKEFPDKFGFSVSHTTRAPRAGEKNGVHYHFTNLNDMSTA 466
+ LVL G G G+ + L+ P++F + + HTTR PR E +G HY+F M
Sbjct: 434 KTLVLLGAHGVGRRHIKNTLIHRHPNRFAYPIPHTTRPPRKDEVDGKHYYFVTNEQMMAD 493
Query: 467 IEKGEFIETAIFSGNIYGTSKKAVDDVRRTGQICVLDIEMEGVKQIKRTDLDPLV 631
I+ E++E ++YGT + + ++ ++G+I +LD+E + +K ++ + P V
Sbjct: 494 IQNNEYLEYGTHEESMYGTKLETIRNIHKSGKIAILDVEPQALKVLRTAEYSPFV 548
>Z50873-1|CAA90760.2| 961|Caenorhabditis elegans Hypothetical protein
F17E5.1a protein.
Length = 961
Score = 85.8 bits (203), Expect = 4e-17
Identities = 35/115 (30%), Positives = 64/115 (55%)
Frame = +2
Query: 287 RPLVLCGPSGSGKSTLLKRLLKEFPDKFGFSVSHTTRAPRAGEKNGVHYHFTNLNDMSTA 466
+ LVL G G G+ + L+ P++F + + HTTR PR E +G HY+F M
Sbjct: 775 KTLVLLGAHGVGRRHIKNTLIHRHPNRFAYPIPHTTRPPRKDEVDGKHYYFVTNEQMMAD 834
Query: 467 IEKGEFIETAIFSGNIYGTSKKAVDDVRRTGQICVLDIEMEGVKQIKRTDLDPLV 631
I+ E++E ++YGT + + ++ ++G+I +LD+E + +K ++ + P V
Sbjct: 835 IQNNEYLEYGTHEESMYGTKLETIRNIHKSGKIAILDVEPQALKVLRTAEYSPFV 889
>X92565-1|CAA63315.1| 620|Caenorhabditis elegans LIN-2B protein.
Length = 620
Score = 85.8 bits (203), Expect = 4e-17
Identities = 35/115 (30%), Positives = 64/115 (55%)
Frame = +2
Query: 287 RPLVLCGPSGSGKSTLLKRLLKEFPDKFGFSVSHTTRAPRAGEKNGVHYHFTNLNDMSTA 466
+ LVL G G G+ + L+ P++F + + HTTR PR E +G HY+F M
Sbjct: 434 KTLVLLGAHGVGRRHIKNTLIHRHPNRFAYPIPHTTRPPRKDEVDGKHYYFVTNEQMMAD 493
Query: 467 IEKGEFIETAIFSGNIYGTSKKAVDDVRRTGQICVLDIEMEGVKQIKRTDLDPLV 631
I+ E++E ++YGT + + ++ ++G+I +LD+E + +K ++ + P V
Sbjct: 494 IQNNEYLEYGTHEESMYGTKLETIRNIHKSGKIAILDVEPQALKVLRTAEYSPFV 548
>X92564-1|CAA63314.1| 961|Caenorhabditis elegans LIN-2A protein.
Length = 961
Score = 85.8 bits (203), Expect = 4e-17
Identities = 35/115 (30%), Positives = 64/115 (55%)
Frame = +2
Query: 287 RPLVLCGPSGSGKSTLLKRLLKEFPDKFGFSVSHTTRAPRAGEKNGVHYHFTNLNDMSTA 466
+ LVL G G G+ + L+ P++F + + HTTR PR E +G HY+F M
Sbjct: 775 KTLVLLGAHGVGRRHIKNTLIHRHPNRFAYPIPHTTRPPRKDEVDGKHYYFVTNEQMMAD 834
Query: 467 IEKGEFIETAIFSGNIYGTSKKAVDDVRRTGQICVLDIEMEGVKQIKRTDLDPLV 631
I+ E++E ++YGT + + ++ ++G+I +LD+E + +K ++ + P V
Sbjct: 835 IQNNEYLEYGTHEESMYGTKLETIRNIHKSGKIAILDVEPQALKVLRTAEYSPFV 889
>U53147-4|AAA96115.1| 668|Caenorhabditis elegans Temporarily
assigned gene nameprotein 117 protein.
Length = 668
Score = 84.6 bits (200), Expect = 8e-17
Identities = 42/115 (36%), Positives = 62/115 (53%)
Frame = +2
Query: 287 RPLVLCGPSGSGKSTLLKRLLKEFPDKFGFSVSHTTRAPRAGEKNGVHYHFTNLNDMSTA 466
RP+VLCG G G L RLL+ V +T+R P+ GE NGVHYHF +
Sbjct: 471 RPIVLCGAEGVGCLKLRDRLLESDRITLACPVPYTSRTPKEGEFNGVHYHFVSKQKFHED 530
Query: 467 IEKGEFIETAIFSGNIYGTSKKAVDDVRRTGQICVLDIEMEGVKQIKRTDLDPLV 631
+ G+F+E + YGT+KK V +V G+ CV+ ++ E + I+ D+ P +
Sbjct: 531 AKSGKFVEFGEYQKFWYGTAKKDVVNVIERGKTCVMTLKAESLGAIRSPDIQPYI 585
>U39742-7|AAK39197.2| 967|Caenorhabditis elegans Drosophila discs
large homologprotein 1, isoform a protein.
Length = 967
Score = 80.6 bits (190), Expect = 1e-15
Identities = 39/115 (33%), Positives = 64/115 (55%), Gaps = 1/115 (0%)
Frame = +2
Query: 287 RPLVLCGPSGSGKSTLLKRLLKEFPDKFGFSVSHTTRAPRAGEKNGVHYHFTNLNDMSTA 466
RP+++ G K + L+ P KF V HT+R PR GE NG Y+F N ++M
Sbjct: 770 RPVIILGAL---KDRINDELVNRDPSKFSSCVPHTSRPPREGEVNGRDYYFVNKHNMEED 826
Query: 467 IEKGEFIETAIFSGNIYGTSKKAVDDVRRTGQICVLDIEMEGVKQIK-RTDLDPL 628
++ FIE F N+YGTS ++V DV G+ C+LD+ +++++ ++ P+
Sbjct: 827 VKNNLFIEAGQFQNNLYGTSIQSVRDVANQGRHCILDVSGNAIRRLQSNANIQPI 881
>AJ295228-1|CAC35153.1| 967|Caenorhabditis elegans MAGUK protein
DLG-1 protein.
Length = 967
Score = 80.6 bits (190), Expect = 1e-15
Identities = 39/115 (33%), Positives = 64/115 (55%), Gaps = 1/115 (0%)
Frame = +2
Query: 287 RPLVLCGPSGSGKSTLLKRLLKEFPDKFGFSVSHTTRAPRAGEKNGVHYHFTNLNDMSTA 466
RP+++ G K + L+ P KF V HT+R PR GE NG Y+F N ++M
Sbjct: 770 RPVIILGAL---KDRINDELVNRDPSKFSSCVPHTSRPPREGEVNGRDYYFVNKHNMEED 826
Query: 467 IEKGEFIETAIFSGNIYGTSKKAVDDVRRTGQICVLDIEMEGVKQIK-RTDLDPL 628
++ FIE F N+YGTS ++V DV G+ C+LD+ +++++ ++ P+
Sbjct: 827 VKNNLFIEAGQFQNNLYGTSIQSVRDVANQGRHCILDVSGNAIRRLQSNANIQPI 881
>AF406786-1|AAL01376.1| 967|Caenorhabditis elegans SAP97-like protein
DLG-1 protein.
Length = 967
Score = 80.6 bits (190), Expect = 1e-15
Identities = 39/115 (33%), Positives = 64/115 (55%), Gaps = 1/115 (0%)
Frame = +2
Query: 287 RPLVLCGPSGSGKSTLLKRLLKEFPDKFGFSVSHTTRAPRAGEKNGVHYHFTNLNDMSTA 466
RP+++ G K + L+ P KF V HT+R PR GE NG Y+F N ++M
Sbjct: 770 RPVIILGAL---KDRINDELVNRDPSKFSSCVPHTSRPPREGEVNGRDYYFVNKHNMEED 826
Query: 467 IEKGEFIETAIFSGNIYGTSKKAVDDVRRTGQICVLDIEMEGVKQIK-RTDLDPL 628
++ FIE F N+YGTS ++V DV G+ C+LD+ +++++ ++ P+
Sbjct: 827 VKNNLFIEAGQFQNNLYGTSIQSVRDVANQGRHCILDVSGNAIRRLQSNANIQPI 881
>AC024824-6|AAK85504.2| 567|Caenorhabditis elegans Hypothetical
protein Y55B1BR.4 protein.
Length = 567
Score = 75.8 bits (178), Expect = 4e-14
Identities = 38/119 (31%), Positives = 67/119 (56%)
Frame = +2
Query: 275 QKGPRPLVLCGPSGSGKSTLLKRLLKEFPDKFGFSVSHTTRAPRAGEKNGVHYHFTNLND 454
+K R +VL G G G++ + ++ K F D+F ++ HT+R R E +GV+Y+FT+ ++
Sbjct: 340 KKRRRVVVLLGAPGVGRNEIRRQFFKVFADRFTNAIPHTSRPQRPNESDGVNYYFTSRSE 399
Query: 455 MSTAIEKGEFIETAIFSGNIYGTSKKAVDDVRRTGQICVLDIEMEGVKQIKRTDLDPLV 631
M IE+ E +E F N+YGT+ K+V G + +L ++ I+ + P+V
Sbjct: 400 MERMIERKEMLEYGEFRDNLYGTALKSVRKASEKGTV-LLTPHPLAIENIRTWEFAPIV 457
>U80445-11|AAB37801.2| 479|Caenorhabditis elegans Hypothetical
protein C50F2.8 protein.
Length = 479
Score = 70.9 bits (166), Expect = 1e-12
Identities = 39/117 (33%), Positives = 57/117 (48%)
Frame = +2
Query: 281 GPRPLVLCGPSGSGKSTLLKRLLKEFPDKFGFSVSHTTRAPRAGEKNGVHYHFTNLNDMS 460
G R LVL G G+G+ + LL+ P F V T+RA R GE G Y F ++
Sbjct: 282 GRRTLVLLGAVGTGRRDIKSMLLRLAPHYFSTIVPLTSRAQRPGEVEGREYQFVRKEEIY 341
Query: 461 TAIEKGEFIETAIFSGNIYGTSKKAVDDVRRTGQICVLDIEMEGVKQIKRTDLDPLV 631
I +G +E +YGTS +V + R+G++CVLD + V + + P V
Sbjct: 342 QKIREGGMVEWGELDSQLYGTSADSVRNEIRSGRMCVLDAAPQSVNYLYNAEFMPFV 398
>Z68750-3|CAA92964.2| 1092|Caenorhabditis elegans Hypothetical
protein K01A6.2 protein.
Length = 1092
Score = 53.6 bits (123), Expect = 2e-07
Identities = 19/51 (37%), Positives = 34/51 (66%)
Frame = +2
Query: 377 SVSHTTRAPRAGEKNGVHYHFTNLNDMSTAIEKGEFIETAIFSGNIYGTSK 529
+V +TTR PR GE +G HY F +++D + ++ G+ +E + G++YGT +
Sbjct: 231 TVPYTTRPPREGEVDGEHYRFVSVDDFNKLLDSGDLLENGTYQGHLYGTPR 281
>Z70307-13|CAA94339.1| 354|Caenorhabditis elegans Hypothetical
protein C39E9.13 protein.
Length = 354
Score = 33.1 bits (72), Expect = 0.27
Identities = 16/33 (48%), Positives = 21/33 (63%)
Frame = +2
Query: 293 LVLCGPSGSGKSTLLKRLLKEFPDKFGFSVSHT 391
L+ CGPSG+GK T +K LL+E +G V T
Sbjct: 40 LLFCGPSGAGKKTRIKCLLREL---YGVGVEKT 69
>Z81130-10|CAB03418.1| 653|Caenorhabditis elegans Hypothetical
protein T23G11.6a protein.
Length = 653
Score = 32.7 bits (71), Expect = 0.36
Identities = 18/68 (26%), Positives = 30/68 (44%)
Frame = +2
Query: 434 HFTNLNDMSTAIEKGEFIETAIFSGNIYGTSKKAVDDVRRTGQICVLDIEMEGVKQIKRT 613
H NL + +++ E +ET +FS N VD + Q+ LD+ + I+
Sbjct: 143 HACNLQTIPPSVDSLENLETVVFSNN--KLDSLGVDQFKNKKQLSYLDVSGNFITSIEEK 200
Query: 614 DLDPLVGL 637
+PL L
Sbjct: 201 AFEPLTSL 208
>Z81130-9|CAI70413.1| 616|Caenorhabditis elegans Hypothetical
protein T23G11.6b protein.
Length = 616
Score = 32.7 bits (71), Expect = 0.36
Identities = 18/68 (26%), Positives = 30/68 (44%)
Frame = +2
Query: 434 HFTNLNDMSTAIEKGEFIETAIFSGNIYGTSKKAVDDVRRTGQICVLDIEMEGVKQIKRT 613
H NL + +++ E +ET +FS N VD + Q+ LD+ + I+
Sbjct: 143 HACNLQTIPPSVDSLENLETVVFSNN--KLDSLGVDQFKNKKQLSYLDVSGNFITSIEEK 200
Query: 614 DLDPLVGL 637
+PL L
Sbjct: 201 AFEPLTSL 208
>U80440-1|AAK21472.1| 4568|Caenorhabditis elegans Dynein heavy chain
protein 1 protein.
Length = 4568
Score = 31.5 bits (68), Expect = 0.82
Identities = 15/21 (71%), Positives = 17/21 (80%), Gaps = 1/21 (4%)
Frame = +2
Query: 287 RPLVLCGPSGSGKS-TLLKRL 346
+PLVLCGP GSGK+ TLL L
Sbjct: 2531 KPLVLCGPPGSGKTMTLLAAL 2551
>L33260-1|AAC37251.1| 4568|Caenorhabditis elegans dynein heavy chain
protein.
Length = 4568
Score = 31.5 bits (68), Expect = 0.82
Identities = 15/21 (71%), Positives = 17/21 (80%), Gaps = 1/21 (4%)
Frame = +2
Query: 287 RPLVLCGPSGSGKS-TLLKRL 346
+PLVLCGP GSGK+ TLL L
Sbjct: 2531 KPLVLCGPPGSGKTMTLLAAL 2551
>Z93395-6|CAB07708.1| 3375|Caenorhabditis elegans Hypothetical protein
ZC101.2e protein.
Length = 3375
Score = 30.7 bits (66), Expect = 1.4
Identities = 25/97 (25%), Positives = 42/97 (43%), Gaps = 3/97 (3%)
Frame = +2
Query: 386 HTTRAPRAGEKNGVHY-HFTNLNDMSTAIEKGEFIETAIFSGNIYGTSKKAVDDVRRTGQ 562
H+ R R G + + ++ ++ ST I ++ IF G + SK
Sbjct: 3272 HSVRFERKGREGQMRIDNYREVDGRSTGILAMLNVDGNIFVGGVPDISKATGGLFSNNFV 3331
Query: 563 ICVLDIEMEGVK-QIKRTDLD-PLVGLCDATIYR*TW 667
C+ D+E+ GVK + T +D V CD ++R W
Sbjct: 3332 GCIADVELNGVKLDLMATAIDGKNVKPCDEWMHRKRW 3368
>Z93375-8|CAB07569.1| 3375|Caenorhabditis elegans Hypothetical protein
ZC101.2e protein.
Length = 3375
Score = 30.7 bits (66), Expect = 1.4
Identities = 25/97 (25%), Positives = 42/97 (43%), Gaps = 3/97 (3%)
Frame = +2
Query: 386 HTTRAPRAGEKNGVHY-HFTNLNDMSTAIEKGEFIETAIFSGNIYGTSKKAVDDVRRTGQ 562
H+ R R G + + ++ ++ ST I ++ IF G + SK
Sbjct: 3272 HSVRFERKGREGQMRIDNYREVDGRSTGILAMLNVDGNIFVGGVPDISKATGGLFSNNFV 3331
Query: 563 ICVLDIEMEGVK-QIKRTDLD-PLVGLCDATIYR*TW 667
C+ D+E+ GVK + T +D V CD ++R W
Sbjct: 3332 GCIADVELNGVKLDLMATAIDGKNVKPCDEWMHRKRW 3368
>Z73971-10|CAA98251.1| 838|Caenorhabditis elegans Hypothetical
protein C50H2.3 protein.
Length = 838
Score = 30.7 bits (66), Expect = 1.4
Identities = 11/31 (35%), Positives = 18/31 (58%), Gaps = 1/31 (3%)
Frame = +1
Query: 487 RNCNF-QWKHLWNKQESSR*CTSYWPNMCAG 576
+ CN +W+H W + S+ C S+W + C G
Sbjct: 470 KECNGGRWRHQWYFDKGSKKCFSFWYDGCKG 500
>Z70265-1|CAA94202.1| 1283|Caenorhabditis elegans Hypothetical protein
C05A9.1 protein.
Length = 1283
Score = 30.7 bits (66), Expect = 1.4
Identities = 15/24 (62%), Positives = 18/24 (75%)
Frame = +2
Query: 287 RPLVLCGPSGSGKSTLLKRLLKEF 358
R L L GPSGSGKST++ LL+ F
Sbjct: 1065 RTLALVGPSGSGKSTIIS-LLERF 1087
>U33934-1|AAA96507.1| 838|Caenorhabditis elegans MEC-9L protein.
Length = 838
Score = 30.7 bits (66), Expect = 1.4
Identities = 11/31 (35%), Positives = 18/31 (58%), Gaps = 1/31 (3%)
Frame = +1
Query: 487 RNCNF-QWKHLWNKQESSR*CTSYWPNMCAG 576
+ CN +W+H W + S+ C S+W + C G
Sbjct: 470 KECNGGRWRHQWYFDKGSKKCFSFWYDGCKG 500
>U33933-1|AAA96506.1| 838|Caenorhabditis elegans MEC-9L protein.
Length = 838
Score = 30.7 bits (66), Expect = 1.4
Identities = 11/31 (35%), Positives = 18/31 (58%), Gaps = 1/31 (3%)
Frame = +1
Query: 487 RNCNF-QWKHLWNKQESSR*CTSYWPNMCAG 576
+ CN +W+H W + S+ C S+W + C G
Sbjct: 470 KECNGGRWRHQWYFDKGSKKCFSFWYDGCKG 500
>AL132949-7|CAB61080.1| 1168|Caenorhabditis elegans Hypothetical
protein Y53F4B.9 protein.
Length = 1168
Score = 30.7 bits (66), Expect = 1.4
Identities = 13/22 (59%), Positives = 16/22 (72%)
Frame = +2
Query: 290 PLVLCGPSGSGKSTLLKRLLKE 355
PLVL GPSG GK+ L + L K+
Sbjct: 818 PLVLIGPSGVGKTALFRALAKQ 839
>AF132883-1|AAD25092.1| 925|Caenorhabditis elegans UNC-52/Perlecan
protein.
Length = 925
Score = 30.7 bits (66), Expect = 1.4
Identities = 25/97 (25%), Positives = 42/97 (43%), Gaps = 3/97 (3%)
Frame = +2
Query: 386 HTTRAPRAGEKNGVHY-HFTNLNDMSTAIEKGEFIETAIFSGNIYGTSKKAVDDVRRTGQ 562
H+ R R G + + ++ ++ ST I ++ IF G + SK
Sbjct: 822 HSVRFERKGREGQMRIDNYREVDGRSTGILAMLNVDGNIFVGGVPDISKATGGLFSNNFV 881
Query: 563 ICVLDIEMEGVK-QIKRTDLD-PLVGLCDATIYR*TW 667
C+ D+E+ GVK + T +D V CD ++R W
Sbjct: 882 GCIADVELNGVKLDLMATAIDGKNVKPCDEWMHRKRW 918
>Z48585-2|CAA88479.1| 222|Caenorhabditis elegans Hypothetical
protein ZK673.2 protein.
Length = 222
Score = 30.3 bits (65), Expect = 1.9
Identities = 22/81 (27%), Positives = 37/81 (45%)
Frame = +2
Query: 293 LVLCGPSGSGKSTLLKRLLKEFPDKFGFSVSHTTRAPRAGEKNGVHYHFTNLNDMSTAIE 472
++L G +GSGK T+ + L++EF + GF+ R G + + +
Sbjct: 4 VLLSGAAGSGKGTIARMLVREF-EPLGFNYFAAGDFIRDHIARGTEFGVR----AQSFLN 58
Query: 473 KGEFIETAIFSGNIYGTSKKA 535
KGE + +I +G I KA
Sbjct: 59 KGEHVPDSILNGAILAEMLKA 79
>AC025721-7|AAK29911.3| 668|Caenorhabditis elegans Half transporter
(pgp related)protein 6 protein.
Length = 668
Score = 30.3 bits (65), Expect = 1.9
Identities = 13/27 (48%), Positives = 17/27 (62%)
Frame = +2
Query: 293 LVLCGPSGSGKSTLLKRLLKEFPDKFG 373
+ LCGPSG GKST+ L + + K G
Sbjct: 456 VALCGPSGEGKSTITHLLERFYEPKSG 482
>AF106573-7|AAC78158.1| 838|Caenorhabditis elegans Hypothetical
protein F52D2.6 protein.
Length = 838
Score = 29.9 bits (64), Expect = 2.5
Identities = 14/39 (35%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
Frame = -3
Query: 283 PFLNHCSNKEFQER-G*GCYSVFSKR*NHKIWQWLSIFK 170
P C++ +R G C V++ N+K+W+WLS+FK
Sbjct: 596 PVFTDCNDCPTPKRSGFNC-EVWTAEVNNKVWRWLSLFK 633
>AF059715-1|AAF05624.1| 813|Caenorhabditis elegans cell survival
CED-4-interactingprotein MAC-1 protein.
Length = 813
Score = 29.9 bits (64), Expect = 2.5
Identities = 15/33 (45%), Positives = 20/33 (60%)
Frame = +2
Query: 284 PRPLVLCGPSGSGKSTLLKRLLKEFPDKFGFSV 382
P+ ++LCGP G GK+ L K + E F FSV
Sbjct: 568 PQGILLCGPPGCGKTLLAKAVANETGMNF-FSV 599
>Z82059-12|CAB04880.1| 622|Caenorhabditis elegans Hypothetical
protein T27E9.7 protein.
Length = 622
Score = 29.1 bits (62), Expect = 4.4
Identities = 14/33 (42%), Positives = 19/33 (57%)
Frame = +2
Query: 293 LVLCGPSGSGKSTLLKRLLKEFPDKFGFSVSHT 391
+ L GP+G+GKSTLLK L + G H+
Sbjct: 424 IALVGPNGAGKSTLLKLLCTDVMPTDGLIRRHS 456
>Z77666-6|CAB01232.1| 1321|Caenorhabditis elegans Hypothetical protein
K08E7.9 protein.
Length = 1321
Score = 29.1 bits (62), Expect = 4.4
Identities = 15/27 (55%), Positives = 18/27 (66%)
Frame = +2
Query: 293 LVLCGPSGSGKSTLLKRLLKEFPDKFG 373
L L GPSG GKST++ LL+ F D G
Sbjct: 1108 LALVGPSGCGKSTVV-ALLERFYDTLG 1133
>Z75537-2|CAA99835.1| 622|Caenorhabditis elegans Hypothetical
protein F18E2.2 protein.
Length = 622
Score = 29.1 bits (62), Expect = 4.4
Identities = 14/34 (41%), Positives = 19/34 (55%)
Frame = +2
Query: 293 LVLCGPSGSGKSTLLKRLLKEFPDKFGFSVSHTT 394
+ + GP+G GKSTLLK L+ + G H T
Sbjct: 433 IAIVGPNGVGKSTLLKLLIGKIDPNDGELRKHRT 466
>X65054-1|CAA46190.1| 1321|Caenorhabditis elegans P-glycoprotein A
protein.
Length = 1321
Score = 29.1 bits (62), Expect = 4.4
Identities = 15/27 (55%), Positives = 18/27 (66%)
Frame = +2
Query: 293 LVLCGPSGSGKSTLLKRLLKEFPDKFG 373
L L GPSG GKST++ LL+ F D G
Sbjct: 1108 LALVGPSGCGKSTVV-ALLERFYDTLG 1133
>U20783-1|AAC46845.1| 535|Caenorhabditis elegans unknown protein.
Length = 535
Score = 29.1 bits (62), Expect = 4.4
Identities = 14/33 (42%), Positives = 19/33 (57%)
Frame = +2
Query: 293 LVLCGPSGSGKSTLLKRLLKEFPDKFGFSVSHT 391
+ L GP+G+GKSTLLK L + G H+
Sbjct: 423 IALVGPNGAGKSTLLKLLCTDVMPTDGLIRRHS 455
>AL117203-4|CAB55106.2| 813|Caenorhabditis elegans Hypothetical
protein Y48C3A.7 protein.
Length = 813
Score = 29.1 bits (62), Expect = 4.4
Identities = 11/24 (45%), Positives = 16/24 (66%)
Frame = +2
Query: 284 PRPLVLCGPSGSGKSTLLKRLLKE 355
P+ ++LCGP G GK+ L K + E
Sbjct: 568 PQGILLCGPPGCGKTLLAKAVANE 591
>AL117200-9|CAB60586.1| 807|Caenorhabditis elegans Hypothetical
protein Y50E8A.16 protein.
Length = 807
Score = 29.1 bits (62), Expect = 4.4
Identities = 21/93 (22%), Positives = 42/93 (45%)
Frame = +2
Query: 287 RPLVLCGPSGSGKSTLLKRLLKEFPDKFGFSVSHTTRAPRAGEKNGVHYHFTNLNDMSTA 466
+ + L GPSG+GKSTL+ + + + + G + T + +HYH TN+ +
Sbjct: 578 KTIALVGPSGNGKSTLVSLIQQFYTPQSGRILIDGTPIQNI---DHLHYH-TNI---ALV 630
Query: 467 IEKGEFIETAIFSGNIYGTSKKAVDDVRRTGQI 565
++ + +YG +D+ R ++
Sbjct: 631 AQEPTLFSGTVRENILYGLENGTDEDMMRVAEM 663
>AL032665-2|CAA21772.1| 622|Caenorhabditis elegans Hypothetical
protein T27E9.7 protein.
Length = 622
Score = 29.1 bits (62), Expect = 4.4
Identities = 14/33 (42%), Positives = 19/33 (57%)
Frame = +2
Query: 293 LVLCGPSGSGKSTLLKRLLKEFPDKFGFSVSHT 391
+ L GP+G+GKSTLLK L + G H+
Sbjct: 424 IALVGPNGAGKSTLLKLLCTDVMPTDGLIRRHS 456
>U40959-3|AAA81767.2| 445|Caenorhabditis elegans Hypothetical
protein B0310.3 protein.
Length = 445
Score = 28.7 bits (61), Expect = 5.8
Identities = 10/27 (37%), Positives = 15/27 (55%)
Frame = -3
Query: 430 MHSVFFTSPWCSCCMGDTEAKLVGKFF 350
M F +PW +CC T A +V ++F
Sbjct: 37 MEGNFLNNPWINCCFVTTYAGVVAQYF 63
>U28928-7|AAA68339.1| 665|Caenorhabditis elegans Peroxisomal
membrane protein relatedprotein 1 protein.
Length = 665
Score = 28.7 bits (61), Expect = 5.8
Identities = 11/25 (44%), Positives = 19/25 (76%)
Frame = +2
Query: 287 RPLVLCGPSGSGKSTLLKRLLKEFP 361
R +++CGP+G GKS+L + L + +P
Sbjct: 473 RNVLVCGPNGCGKSSLFRTLGELWP 497
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,639,248
Number of Sequences: 27780
Number of extensions: 357002
Number of successful extensions: 1111
Number of sequences better than 10.0: 40
Number of HSP's better than 10.0 without gapping: 1022
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1108
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2213393798
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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