Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP16_F_N15
(888 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
06_03_1284 - 28988287-28988922,28989335-28989765,28989850-289899... 85 5e-17
02_01_0355 + 2558792-2558862,2558993-2559099,2559185-2559615,256... 83 3e-16
03_05_0052 - 20293197-20293310,20293938-20294024,20294133-202942... 80 2e-15
01_06_0020 + 25630728-25631023,25631308-25631548,25631629-256317... 79 5e-15
10_08_0553 - 18720436-18720494,18721102-18721106,18721136-187212... 48 1e-05
04_04_0613 + 26617677-26617963,26618726-26618786,26619598-266198... 48 1e-05
02_05_0096 + 25785995-25786311,25786716-25786776,25787825-257880... 48 1e-05
06_03_1255 + 28780181-28781172,28782065-28782932 35 0.075
03_01_0399 + 3097878-3098141,3098254-3098547,3098659-3098886,309... 35 0.075
12_02_0340 - 17725866-17725884,17726046-17726326,17726842-177269... 35 0.099
03_01_0059 + 484305-484617,484919-485406,485608-486092,486185-48... 31 1.2
03_02_0758 + 10954268-10954841,10955988-10957145,10957176-109572... 31 1.6
03_05_0865 - 28365430-28367640 30 2.8
02_02_0619 - 12205718-12205845,12205941-12206142,12207240-122073... 29 6.5
09_04_0006 - 13632902-13633026,13634013-13634179,13634286-136344... 28 8.6
07_03_0989 + 23161020-23161412 28 8.6
>06_03_1284 -
28988287-28988922,28989335-28989765,28989850-28989956,
28990066-28990136
Length = 414
Score = 85.4 bits (202), Expect = 5e-17
Identities = 65/186 (34%), Positives = 88/186 (47%)
Frame = +3
Query: 213 DQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPWHPRDAMLSLKAQSGTGKNCYF 392
D+V E+FDDM L+E LLRGIYAYGFEKPSAIQQR I+P+ + + +AQSGTGK F
Sbjct: 37 DEVHESFDDMGLQENLLRGIYAYGFEKPSAIQQRGIVPF-CKGLDVIQQAQSGTGKTATF 95
Query: 393 SLYRFYNKSIQAFVNVKL*SWAPTESWAHQFRKVVIAXG*SLEMLNAMPGIGGHQCP*RY 572
+ A V + APT A Q KV+ A G L + +GG R
Sbjct: 96 -CSGILQQLDYAVVECQALVLAPTRELAQQIEKVMRALGDYLG-VKVHACVGGTSV--RE 151
Query: 573 SPLXXXXXXXXXXXXXCI*YDNXSCRFMPPPIXLFWXXXXXXXXXXXXFKDQIHDVFKML 752
+D + + P + FKDQI+D+F++L
Sbjct: 152 DQRILASGVHVVVGTPGRVFDMLRRQSLRPDYIKMFVLDEADEMLSRGFKDQIYDIFQLL 211
Query: 753 SADVQV 770
+ +QV
Sbjct: 212 PSKIQV 217
>02_01_0355 +
2558792-2558862,2558993-2559099,2559185-2559615,
2560100-2560735
Length = 414
Score = 83.0 bits (196), Expect = 3e-16
Identities = 64/186 (34%), Positives = 86/186 (46%)
Frame = +3
Query: 213 DQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPWHPRDAMLSLKAQSGTGKNCYF 392
D+V E+FDDM L+E LLRGIYAYGFEKPSAIQQR I+P+ + + +AQSGTGK F
Sbjct: 37 DEVFESFDDMGLQENLLRGIYAYGFEKPSAIQQRGIVPF-CKGLDVIQQAQSGTGKTATF 95
Query: 393 SLYRFYNKSIQAFVNVKL*SWAPTESWAHQFRKVVIAXG*SLEMLNAMPGIGGHQCP*RY 572
+ V + APT A Q KV+ A G L + +GG R
Sbjct: 96 -CSGILQQLDYGLVECQSLVLAPTRELAQQIEKVMRALGDYLG-VKVHACVGGTSV--RE 151
Query: 573 SPLXXXXXXXXXXXXXCI*YDNXSCRFMPPPIXLFWXXXXXXXXXXXXFKDQIHDVFKML 752
+D + + P + FKDQI+D+F++L
Sbjct: 152 DQRILASGVHVVVGTPGRVFDMLRRQSLRPDHIKMFVLDEADEMLSRGFKDQIYDIFQLL 211
Query: 753 SADVQV 770
+QV
Sbjct: 212 PPKIQV 217
>03_05_0052 -
20293197-20293310,20293938-20294024,20294133-20294270,
20295009-20295128,20295236-20295343,20296053-20296133,
20296216-20296456,20297010-20297305
Length = 394
Score = 80.2 bits (189), Expect = 2e-15
Identities = 65/194 (33%), Positives = 89/194 (45%), Gaps = 1/194 (0%)
Frame = +3
Query: 201 TPTGDQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMP-WHPRDAMLSLKAQSGTG 377
T G +V+ +FD M ++E+LLRGIYAYGFEKPSAIQQRA++P RD + +AQSGTG
Sbjct: 23 TSPGVEVISSFDQMGIREDLLRGIYAYGFEKPSAIQQRAVLPIISGRDVI--AQAQSGTG 80
Query: 378 KNCYFSLYRFYNKSIQAFVNVKL*SWAPTESWAHQFRKVVIAXG*SLEMLNAMPGIGGHQ 557
K SL A V+ +PT A Q +V++A G + + IGG
Sbjct: 81 KTSMISL-SVCQIVDTAVREVQALILSPTRELAAQTERVMLAIGDYIN-IQVHACIGGKS 138
Query: 558 CP*RYSPLXXXXXXXXXXXXXCI*YDNXSCRFMPPPIXLFWXXXXXXXXXXXXFKDQIHD 737
L D R + FKDQI+D
Sbjct: 139 IGEDIRKLEHGVHVVSGTPGRVC--DMIKRRTLRTRAIKLLILDEADEMLGRGFKDQIYD 196
Query: 738 VFKMLSADVQVILL 779
V++ L ++QV L+
Sbjct: 197 VYRYLPPELQVCLI 210
>01_06_0020 +
25630728-25631023,25631308-25631548,25631629-25631709,
25632109-25632216,25632329-25632448,25632806-25632943,
25633064-25633150,25633802-25633915
Length = 394
Score = 79.0 bits (186), Expect = 5e-15
Identities = 64/194 (32%), Positives = 89/194 (45%), Gaps = 1/194 (0%)
Frame = +3
Query: 201 TPTGDQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMP-WHPRDAMLSLKAQSGTG 377
T G +V+ +FD M ++++LLRGIYAYGFEKPSAIQQRA++P RD + +AQSGTG
Sbjct: 23 TSPGVEVISSFDQMGIRDDLLRGIYAYGFEKPSAIQQRAVLPIISGRDVI--AQAQSGTG 80
Query: 378 KNCYFSLYRFYNKSIQAFVNVKL*SWAPTESWAHQFRKVVIAXG*SLEMLNAMPGIGGHQ 557
K SL A V+ +PT A Q +V++A G + + IGG
Sbjct: 81 KTSMISL-SVCQIVDTAVREVQALILSPTRELAAQTERVMLAIGDFIN-IQVHACIGGKS 138
Query: 558 CP*RYSPLXXXXXXXXXXXXXCI*YDNXSCRFMPPPIXLFWXXXXXXXXXXXXFKDQIHD 737
L D R + FKDQI+D
Sbjct: 139 IGEDIRKLEHGVHVVSGTPGRVC--DMIKRRTLRTRAIKLLILDEADEMLGRGFKDQIYD 196
Query: 738 VFKMLSADVQVILL 779
V++ L ++QV L+
Sbjct: 197 VYRYLPPELQVCLI 210
>10_08_0553 -
18720436-18720494,18721102-18721106,18721136-18721257,
18721390-18721478,18722136-18722316,18722403-18722654,
18722755-18722993,18723680-18723914,18724072-18724132,
18724632-18724987
Length = 532
Score = 47.6 bits (108), Expect = 1e-05
Identities = 25/56 (44%), Positives = 35/56 (62%)
Frame = +3
Query: 231 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPWHPRDAMLSLKAQSGTGKNCYFSL 398
F+D LK ELL GIY GFE+PS IQ+ +I P + + +A++GTGK F +
Sbjct: 149 FEDYFLKRELLMGIYEKGFERPSPIQEESI-PIALTGSDILARAKNGTGKTAAFCI 203
>04_04_0613 +
26617677-26617963,26618726-26618786,26619598-26619832,
26619958-26620196,26620493-26620744,26620844-26621024,
26621810-26621898,26622200-26622273,26622365-26622443
Length = 498
Score = 47.6 bits (108), Expect = 1e-05
Identities = 25/56 (44%), Positives = 35/56 (62%)
Frame = +3
Query: 231 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPWHPRDAMLSLKAQSGTGKNCYFSL 398
F+D LK ELL GIY GFE+PS IQ+ +I P + + +A++GTGK F +
Sbjct: 126 FEDYFLKRELLMGIYEKGFERPSPIQEESI-PIALTGSDILARAKNGTGKTAAFCI 180
>02_05_0096 +
25785995-25786311,25786716-25786776,25787825-25788059,
25788292-25788530,25789700-25789951,25790043-25790223,
25790864-25790952,25791269-25791342,25791481-25791584,
25791919-25791957,25792324-25792436
Length = 567
Score = 47.6 bits (108), Expect = 1e-05
Identities = 25/56 (44%), Positives = 35/56 (62%)
Frame = +3
Query: 231 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPWHPRDAMLSLKAQSGTGKNCYFSL 398
F+D LK ELL GIY GFE+PS IQ+ +I P + + +A++GTGK F +
Sbjct: 136 FEDYFLKRELLMGIYEKGFERPSPIQEESI-PIALTGSDILARAKNGTGKTAAFCI 190
>06_03_1255 + 28780181-28781172,28782065-28782932
Length = 619
Score = 35.1 bits (77), Expect = 0.075
Identities = 27/78 (34%), Positives = 40/78 (51%), Gaps = 4/78 (5%)
Frame = +3
Query: 177 REWTLGHLTPTGDQVV---ETFDDMNLKEELLRGIYAYGFEKPSAIQQRAI-MPWHPRDA 344
R W H+ GD V +F D+ L E +LR + G EKP+ IQ + + + RD
Sbjct: 157 RSW---HILVDGDDVPPPSRSFGDLRLPEPILRALRGKGIEKPTPIQVQGLPVALSGRD- 212
Query: 345 MLSLKAQSGTGKNCYFSL 398
M+ + A +G+GK F L
Sbjct: 213 MIGI-AFTGSGKTLVFVL 229
>03_01_0399 +
3097878-3098141,3098254-3098547,3098659-3098886,
3099148-3099224,3099501-3099540,3099737-3099802,
3100305-3100706,3100777-3100888,3101445-3101530,
3101607-3101672
Length = 544
Score = 35.1 bits (77), Expect = 0.075
Identities = 29/95 (30%), Positives = 43/95 (45%), Gaps = 2/95 (2%)
Frame = +3
Query: 231 FDDMNLKEELLRGIY-AYGFEKPSAIQQRAI-MPWHPRDAMLSLKAQSGTGKNCYFSLYR 404
F+D+ L ELL+G++ GF +PS IQ + M P L +A +G+GK F L
Sbjct: 102 FEDLKLTPELLKGLHDEMGFSRPSKIQAVTLPMILTPPYKDLIAQAHNGSGKTTCFVLGM 161
Query: 405 FYNKSIQAFVNVKL*SWAPTESWAHQFRKVVIAXG 509
V + PT A Q + V++ G
Sbjct: 162 LSRVDPNRKVTQAI-CICPTRELAQQNKSVLMRMG 195
>12_02_0340 -
17725866-17725884,17726046-17726326,17726842-17726928,
17727018-17727113,17728484-17728585,17728720-17728762,
17728834-17728952,17729348-17729444,17730153-17730214,
17730370-17730432,17730847-17730949,17731402-17731497,
17731594-17731742,17732356-17732529,17733078-17733156,
17733807-17733913,17733994-17734062,17734879-17735043,
17735206-17735703
Length = 802
Score = 34.7 bits (76), Expect = 0.099
Identities = 21/57 (36%), Positives = 31/57 (54%)
Frame = +3
Query: 228 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPWHPRDAMLSLKAQSGTGKNCYFSL 398
+F ++NL LLR A G++KP+ I Q A +P + A +G+GK FSL
Sbjct: 195 SFLELNLSRPLLRACEALGYQKPTPI-QAACIPLALTGRDICGSAITGSGKTAAFSL 250
>03_01_0059 +
484305-484617,484919-485406,485608-486092,486185-486461,
486495-486626,486721-486893,486982-487204
Length = 696
Score = 31.1 bits (67), Expect = 1.2
Identities = 16/51 (31%), Positives = 29/51 (56%)
Frame = +3
Query: 228 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPWHPRDAMLSLKAQSGTGK 380
+F ++ +E+L + ++GF +PS IQ A P + + + QSG+GK
Sbjct: 241 SFKEIGCSDEILGALRSFGFPRPSHIQAMAYRPVLEGKSCI-IGDQSGSGK 290
>03_02_0758 +
10954268-10954841,10955988-10957145,10957176-10957216,
10957412-10957448,10957534-10957954,10958201-10958234
Length = 754
Score = 30.7 bits (66), Expect = 1.6
Identities = 19/60 (31%), Positives = 35/60 (58%), Gaps = 1/60 (1%)
Frame = +3
Query: 222 VETFDDMNLKEELLRGIYAYGFEKPSAIQQRAI-MPWHPRDAMLSLKAQSGTGKNCYFSL 398
+++F D +L+ I G+EKP+ IQ +A+ + RD ++ + A++G+GK F L
Sbjct: 218 IKSFADCGFPVQLMNAIAKQGYEKPTTIQCQALPIVLSGRD-IIGI-AKTGSGKTAAFVL 275
>03_05_0865 - 28365430-28367640
Length = 736
Score = 29.9 bits (64), Expect = 2.8
Identities = 17/56 (30%), Positives = 31/56 (55%)
Frame = +3
Query: 231 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPWHPRDAMLSLKAQSGTGKNCYFSL 398
+ + L ELLR + G+++PS IQ +I + ++ + A++G+GK F L
Sbjct: 317 WSESKLGTELLRAVEKAGYKEPSPIQMASIPLGLQQRDVIGI-AETGSGKTAAFVL 371
>02_02_0619 -
12205718-12205845,12205941-12206142,12207240-12207315,
12208073-12208278
Length = 203
Score = 28.7 bits (61), Expect = 6.5
Identities = 11/32 (34%), Positives = 20/32 (62%)
Frame = -2
Query: 323 HYCALLDCRRFFKTIGVYASQQFFFEVHVIEG 228
++C +L C+R + G +++QQ FF +I G
Sbjct: 118 YHCNILGCKRLNDSTGEHSTQQRFFVELIING 149
>09_04_0006 -
13632902-13633026,13634013-13634179,13634286-13634437,
13634564-13634672,13635096-13635280,13635372-13635687,
13635796-13635903,13635994-13636139,13636223-13636237
Length = 440
Score = 28.3 bits (60), Expect = 8.6
Identities = 18/66 (27%), Positives = 32/66 (48%)
Frame = +3
Query: 183 WTLGHLTPTGDQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPWHPRDAMLSLKA 362
W +G +TP+ D +E + D IY GF++ + R ++ PR++ +S K
Sbjct: 60 WNVGGMTPSSDLDLEDWMDSTANS---YDIYVLGFQEIVPLNARNVL--GPRNSCISTKW 114
Query: 363 QSGTGK 380
S G+
Sbjct: 115 NSLIGE 120
>07_03_0989 + 23161020-23161412
Length = 130
Score = 28.3 bits (60), Expect = 8.6
Identities = 22/64 (34%), Positives = 33/64 (51%)
Frame = +3
Query: 114 RLARGFQKWAIEGSRVVTMDLREWTLGHLTPTGDQVVETFDDMNLKEELLRGIYAYGFEK 293
R+ RG ++ +G R LR W TP Q+ E D++N EEL+ G G++
Sbjct: 75 RVQRGTGRFLFDGRR-----LRGWQ----TPAELQM-EDGDEVNFFEELIGGAAGSGWDP 124
Query: 294 PSAI 305
PS+I
Sbjct: 125 PSSI 128
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,139,646
Number of Sequences: 37544
Number of extensions: 552859
Number of successful extensions: 1272
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 1219
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1266
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2495239620
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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