Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP16_F_N14
         (901 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC016305-1|AAH16305.1|  546|Homo sapiens Unknown (protein for IM...    32   3.3  
AY596971-1|AAT49272.1| 2083|Homo sapiens tuberin-like protein 1 ...    32   3.3  
AY596970-1|AAT49271.1| 2036|Homo sapiens tuberin-like protein 1 ...    32   3.3  
AK022988-1|BAB14349.1|  452|Homo sapiens protein ( Homo sapiens ...    32   3.3  
AB020691-1|BAA74907.1|  943|Homo sapiens KIAA0884 protein protein.     32   3.3  

>BC016305-1|AAH16305.1|  546|Homo sapiens Unknown (protein for
           IMAGE:4076117) protein.
          Length = 546

 Score = 31.9 bits (69), Expect = 3.3
 Identities = 13/42 (30%), Positives = 21/42 (50%)
 Frame = -1

Query: 349 EPTACSSTPMVFRXLSMIRLLTTFWMMEPLALGSHIPSSDGQ 224
           E   C+  P +   + +IR L +FW+      G HIP  +G+
Sbjct: 134 EAIYCTKEPFIKARVIVIRWLVSFWLEPKPHTGPHIPGMEGE 175


>AY596971-1|AAT49272.1| 2083|Homo sapiens tuberin-like protein 1
           isoform 2 protein.
          Length = 2083

 Score = 31.9 bits (69), Expect = 3.3
 Identities = 13/42 (30%), Positives = 21/42 (50%)
 Frame = -1

Query: 349 EPTACSSTPMVFRXLSMIRLLTTFWMMEPLALGSHIPSSDGQ 224
           E   C+  P +   + +IR L +FW+      G HIP  +G+
Sbjct: 289 EAIYCTKEPFIKARVIVIRWLVSFWLEPKPHTGPHIPGMEGE 330


>AY596970-1|AAT49271.1| 2036|Homo sapiens tuberin-like protein 1
           isoform 1 protein.
          Length = 2036

 Score = 31.9 bits (69), Expect = 3.3
 Identities = 13/42 (30%), Positives = 21/42 (50%)
 Frame = -1

Query: 349 EPTACSSTPMVFRXLSMIRLLTTFWMMEPLALGSHIPSSDGQ 224
           E   C+  P +   + +IR L +FW+      G HIP  +G+
Sbjct: 289 EAIYCTKEPFIKARVIVIRWLVSFWLEPKPHTGPHIPGMEGE 330


>AK022988-1|BAB14349.1|  452|Homo sapiens protein ( Homo sapiens
           cDNA FLJ12926 fis, clone NT2RP2004732, weakly similar to
           NEUROFILAMENT TRIPLET M PROTEIN. ).
          Length = 452

 Score = 31.9 bits (69), Expect = 3.3
 Identities = 13/42 (30%), Positives = 21/42 (50%)
 Frame = -1

Query: 349 EPTACSSTPMVFRXLSMIRLLTTFWMMEPLALGSHIPSSDGQ 224
           E   C+  P +   + +IR L +FW+      G HIP  +G+
Sbjct: 18  EAIYCTKEPFIKARVIVIRWLVSFWLEPKPHTGPHIPGMEGE 59


>AB020691-1|BAA74907.1|  943|Homo sapiens KIAA0884 protein protein.
          Length = 943

 Score = 31.9 bits (69), Expect = 3.3
 Identities = 13/42 (30%), Positives = 21/42 (50%)
 Frame = -1

Query: 349 EPTACSSTPMVFRXLSMIRLLTTFWMMEPLALGSHIPSSDGQ 224
           E   C+  P +   + +IR L +FW+      G HIP  +G+
Sbjct: 128 EAIYCTKEPFIKARVIVIRWLVSFWLEPKPHTGPHIPGMEGE 169


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 87,259,015
Number of Sequences: 237096
Number of extensions: 1479074
Number of successful extensions: 6685
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 6621
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6685
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11603768198
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)