Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP16_F_N11
         (946 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC005374-1|AAH05374.1|  406|Homo sapiens thioredoxin domain cont...    31   6.1  
AY359048-1|AAQ89407.1|  406|Homo sapiens TXNDC4 protein.               31   6.1  
AL360084-2|CAH70308.1|  406|Homo sapiens thioredoxin domain cont...    31   6.1  
AL358937-2|CAI95319.1|  406|Homo sapiens thioredoxin domain cont...    31   6.1  
AL137072-1|CAH72172.1|  406|Homo sapiens thioredoxin domain cont...    31   6.1  
AJ344330-1|CAC87611.1|  406|Homo sapiens ERp44 protein protein.        31   6.1  
AB011145-1|BAA25499.1|  451|Homo sapiens KIAA0573 protein protein.     31   6.1  

>BC005374-1|AAH05374.1|  406|Homo sapiens thioredoxin domain
           containing 4 (endoplasmic reticulum) protein.
          Length = 406

 Score = 31.1 bits (67), Expect = 6.1
 Identities = 14/31 (45%), Positives = 17/31 (54%)
 Frame = -3

Query: 287 FSMLYSLGDLXDVLXHGRLEDMVKQLHDAKL 195
           F  +Y  GD  DVL  G+L+  V  LH  KL
Sbjct: 326 FRHMYVFGDFKDVLIPGKLKQFVFDLHSGKL 356


>AY359048-1|AAQ89407.1|  406|Homo sapiens TXNDC4 protein.
          Length = 406

 Score = 31.1 bits (67), Expect = 6.1
 Identities = 14/31 (45%), Positives = 17/31 (54%)
 Frame = -3

Query: 287 FSMLYSLGDLXDVLXHGRLEDMVKQLHDAKL 195
           F  +Y  GD  DVL  G+L+  V  LH  KL
Sbjct: 326 FRHMYVFGDFKDVLIPGKLKQFVFDLHSGKL 356


>AL360084-2|CAH70308.1|  406|Homo sapiens thioredoxin domain
           containing 4 (endoplasmic reticulum) protein.
          Length = 406

 Score = 31.1 bits (67), Expect = 6.1
 Identities = 14/31 (45%), Positives = 17/31 (54%)
 Frame = -3

Query: 287 FSMLYSLGDLXDVLXHGRLEDMVKQLHDAKL 195
           F  +Y  GD  DVL  G+L+  V  LH  KL
Sbjct: 326 FRHMYVFGDFKDVLIPGKLKQFVFDLHSGKL 356


>AL358937-2|CAI95319.1|  406|Homo sapiens thioredoxin domain
           containing 4 (endoplasmic reticulum) protein.
          Length = 406

 Score = 31.1 bits (67), Expect = 6.1
 Identities = 14/31 (45%), Positives = 17/31 (54%)
 Frame = -3

Query: 287 FSMLYSLGDLXDVLXHGRLEDMVKQLHDAKL 195
           F  +Y  GD  DVL  G+L+  V  LH  KL
Sbjct: 326 FRHMYVFGDFKDVLIPGKLKQFVFDLHSGKL 356


>AL137072-1|CAH72172.1|  406|Homo sapiens thioredoxin domain
           containing 4 (endoplasmic reticulum) protein.
          Length = 406

 Score = 31.1 bits (67), Expect = 6.1
 Identities = 14/31 (45%), Positives = 17/31 (54%)
 Frame = -3

Query: 287 FSMLYSLGDLXDVLXHGRLEDMVKQLHDAKL 195
           F  +Y  GD  DVL  G+L+  V  LH  KL
Sbjct: 326 FRHMYVFGDFKDVLIPGKLKQFVFDLHSGKL 356


>AJ344330-1|CAC87611.1|  406|Homo sapiens ERp44 protein protein.
          Length = 406

 Score = 31.1 bits (67), Expect = 6.1
 Identities = 14/31 (45%), Positives = 17/31 (54%)
 Frame = -3

Query: 287 FSMLYSLGDLXDVLXHGRLEDMVKQLHDAKL 195
           F  +Y  GD  DVL  G+L+  V  LH  KL
Sbjct: 326 FRHMYVFGDFKDVLIPGKLKQFVFDLHSGKL 356


>AB011145-1|BAA25499.1|  451|Homo sapiens KIAA0573 protein protein.
          Length = 451

 Score = 31.1 bits (67), Expect = 6.1
 Identities = 14/31 (45%), Positives = 17/31 (54%)
 Frame = -3

Query: 287 FSMLYSLGDLXDVLXHGRLEDMVKQLHDAKL 195
           F  +Y  GD  DVL  G+L+  V  LH  KL
Sbjct: 371 FRHMYVFGDFKDVLIPGKLKQFVFDLHSGKL 401


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 86,749,773
Number of Sequences: 237096
Number of extensions: 1408655
Number of successful extensions: 2268
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 2065
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2241
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 12436574528
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)