Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP16_F_N11
         (946 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.          37   3e-04
EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.      37   3e-04
EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.          33   0.005
AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.      33   0.005

>EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.
          Length = 684

 Score = 36.7 bits (81), Expect = 3e-04
 Identities = 15/34 (44%), Positives = 20/34 (58%)
 Frame = +1

Query: 274 YNIEXSCDKYMNVDVVXQFMEMYXMGMLPXGXTF 375
           +NIE + D Y N   V +F+ +Y  GMLP G  F
Sbjct: 64  WNIEANIDSYTNAAAVKEFLSIYKHGMLPRGELF 97


>EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.
          Length = 684

 Score = 36.7 bits (81), Expect = 3e-04
 Identities = 15/34 (44%), Positives = 20/34 (58%)
 Frame = +1

Query: 274 YNIEXSCDKYMNVDVVXQFMEMYXMGMLPXGXTF 375
           +NIE + D Y N   V +F+ +Y  GMLP G  F
Sbjct: 64  WNIEANIDSYTNAAAVKEFLSIYKHGMLPRGELF 97


>EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.
          Length = 683

 Score = 32.7 bits (71), Expect = 0.005
 Identities = 13/40 (32%), Positives = 22/40 (55%)
 Frame = +1

Query: 268 KEYNIEXSCDKYMNVDVVXQFMEMYXMGMLPXGXTFLHTN 387
           + +N+  + D Y + + V +FM++   GMLP G  F   N
Sbjct: 60  RTFNLVENLDNYNDKEAVNEFMQLLKHGMLPRGQVFTMMN 99


>AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.
          Length = 683

 Score = 32.7 bits (71), Expect = 0.005
 Identities = 13/40 (32%), Positives = 22/40 (55%)
 Frame = +1

Query: 268 KEYNIEXSCDKYMNVDVVXQFMEMYXMGMLPXGXTFLHTN 387
           + +N+  + D Y + + V +FM++   GMLP G  F   N
Sbjct: 60  RTFNLVENLDNYNDKEAVNEFMQLLKHGMLPRGQVFTMMN 99


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 155,785
Number of Sequences: 438
Number of extensions: 2671
Number of successful extensions: 5
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 30960384
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)