Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP16_F_N09
(920 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_05_0686 - 30900748-30902167,30903442-30904742 35 0.079
11_06_0610 - 25449085-25453284 32 0.74
09_03_0145 - 12749288-12751510 31 0.97
07_03_1136 + 24218601-24218734,24218769-24219906 31 1.7
12_02_1174 - 26696869-26698191 29 3.9
10_01_0100 + 1209424-1209538,1210373-1211073,1211158-1211379,121... 29 3.9
08_01_0003 + 30085-30195,30289-30365,31080-31136,31668-33560,336... 29 5.2
03_02_0455 - 8630543-8630893,8630994-8631068,8631149-8631223,863... 29 6.9
03_01_0515 - 3864796-3865425 28 9.1
01_01_0224 - 1905978-1907084,1907489-1908070,1908653-1908667 28 9.1
>02_05_0686 - 30900748-30902167,30903442-30904742
Length = 906
Score = 35.1 bits (77), Expect = 0.079
Identities = 19/69 (27%), Positives = 21/69 (30%), Gaps = 1/69 (1%)
Frame = +1
Query: 541 PXXPPXPXXXPPXPXXXXPXXXPXXXXXXXXXXXXXXAPPPXQKXXGXVWA-XPPPKNXX 717
P PP P PP P P P +PPP G PPP
Sbjct: 326 PPPPPPPKAAPPPPPPKGPPPPPPAKGPPPPPPPKGPSPPPPPPPGGKKGGPPPPPPKGG 385
Query: 718 XQKPXXXPG 744
+P PG
Sbjct: 386 ASRPPAAPG 394
Score = 29.9 bits (64), Expect = 3.0
Identities = 18/71 (25%), Positives = 18/71 (25%)
Frame = +1
Query: 541 PXXPPXPXXXPPXPXXXXPXXXPXXXXXXXXXXXXXXAPPPXQKXXGXVWAXPPPKNXXX 720
P PP P P P P PPP G PPP
Sbjct: 315 PPPPPKPAAAAPPPPPPPKAAPPPPPPKGPPPPPPAKGPPPPPPPKGPSPPPPPPPGGKK 374
Query: 721 QKPXXXPGKXG 753
P P K G
Sbjct: 375 GGPPPPPPKGG 385
>11_06_0610 - 25449085-25453284
Length = 1399
Score = 31.9 bits (69), Expect = 0.74
Identities = 34/119 (28%), Positives = 38/119 (31%), Gaps = 14/119 (11%)
Frame = +1
Query: 541 PXXPPXPXXXPPXPXXXXPXXXPXXXXXXXXXXXXXXA----PPPXQK---XXGXVWAXP 699
P PP P PP P P P A PPP K V P
Sbjct: 1135 PLPPPVPVSSPPPPEKSPPPPAPVILPPPPIKSPPPPAPVISPPPPVKSPPPPAPVILPP 1194
Query: 700 PP-KNXXXQKPXXXPG---KXGXXXXXLSLXXPPL---TXGNPXLSPPPXXXSPFXAXP 855
PP K+ P P K + L PP+ P +SPPP SP A P
Sbjct: 1195 PPVKSPPPPAPVISPPPPVKSPPPPAPVILPPPPVKSPPPPAPVISPPPPEKSPPPAAP 1253
>09_03_0145 - 12749288-12751510
Length = 740
Score = 31.5 bits (68), Expect = 0.97
Identities = 14/36 (38%), Positives = 14/36 (38%)
Frame = +3
Query: 534 TXPXPPPPXPXXXXPXXXPXXXXXPRGXGXLPFXGG 641
T P PPPP P P P G PF GG
Sbjct: 26 TNPSPPPPPPPPGIQPPPPALPGMPHGRPPPPFPGG 61
>07_03_1136 + 24218601-24218734,24218769-24219906
Length = 423
Score = 30.7 bits (66), Expect = 1.7
Identities = 28/102 (27%), Positives = 30/102 (29%), Gaps = 2/102 (1%)
Frame = -1
Query: 839 GEXXXGGGESXGXPXVKGGXXRESXXXLXPXXPGXKXGFXXXXFLGGGXAQTXPKXFWXG 660
G GGG G P + G G G GGG + G
Sbjct: 105 GARPPGGGGGGGPPSLPPGAGGGGGARPPAPGGGGGGGAPRRVLGGGGGGGALARPPGGG 164
Query: 659 -GGAXXXPPXKREXPXAPGXXXGXXXXGXG-GXXXGXGGXXG 540
GGA PP PG G G G G G GG G
Sbjct: 165 RGGALGRPPGGGGGGGGPGRAPGGGGGGGGPGRAPGGGGGGG 206
>12_02_1174 - 26696869-26698191
Length = 440
Score = 29.5 bits (63), Expect = 3.9
Identities = 19/86 (22%), Positives = 21/86 (24%)
Frame = +1
Query: 550 PPXPXXXPPXPXXXXPXXXPXXXXXXXXXXXXXXAPPPXQKXXGXVWAXPPPKNXXXQKP 729
PP P PP P PPP Q+ W PP KP
Sbjct: 267 PPPPSPLPPPPEDYWSPTAVTPPEPTKPKPPPPSPPPPPQQPSQRYWTPPPAITPEPAKP 326
Query: 730 XXXPGKXGXXXXXLSLXXPPLTXGNP 807
PPL +P
Sbjct: 327 AAGKPTSSSPPSTKDSPRPPLPAPSP 352
>10_01_0100 +
1209424-1209538,1210373-1211073,1211158-1211379,
1211452-1211878,1212091-1213219,1213623-1213746,
1214207-1214278,1215480-1215578,1215617-1215640,
1215704-1215745,1215815-1215895,1215983-1216114,
1216115-1216196,1216271-1216365,1218499-1218570,
1218676-1218792,1219379-1219447,1219521-1219587,
1219886-1220025
Length = 1269
Score = 29.5 bits (63), Expect = 3.9
Identities = 27/128 (21%), Positives = 27/128 (21%)
Frame = +1
Query: 529 NSXXPXXPPXPXXXPPXPXXXXPXXXPXXXXXXXXXXXXXXAPPPXQKXXGXVWAXPPPK 708
N P PP P P P P P PPP PPP
Sbjct: 596 NCLVPSPPPPPPPPPILPNRSVPPPPPPPPPLPNHSVLPPPPPPPPPPSLPNRLVPPPPA 655
Query: 709 NXXXQKPXXXPGKXGXXXXXLSLXXPPLTXGNPXLSPPPXXXSPFXAXPXXXGTXXPRXX 888
K P S P PPP P G P
Sbjct: 656 PGIGNK---FPAPPPPPPPPRSSSRTPTGAATSSKGPPPPPPPPLPPANRTNGPGVPSAP 712
Query: 889 PAXXXTXP 912
P P
Sbjct: 713 PPPPPPPP 720
Score = 28.3 bits (60), Expect = 9.1
Identities = 24/97 (24%), Positives = 25/97 (25%)
Frame = +1
Query: 550 PPXPXXXPPXPXXXXPXXXPXXXXXXXXXXXXXXAPPPXQKXXGXVWAXPPPKNXXXQKP 729
PP P PP P P P PPP PP N P
Sbjct: 585 PPPPPPPPPLPNCLVPSPPPPPPPPPILPNRSVPPPPP---------PPPPLPNHSVLPP 635
Query: 730 XXXPGKXGXXXXXLSLXXPPLTXGNPXLSPPPXXXSP 840
P L P GN +PPP P
Sbjct: 636 PPPPPPPPSLPNRLVPPPPAPGIGNKFPAPPPPPPPP 672
Score = 28.3 bits (60), Expect = 9.1
Identities = 24/101 (23%), Positives = 28/101 (27%)
Frame = +1
Query: 523 VLNSXXPXXPPXPXXXPPXPXXXXPXXXPXXXXXXXXXXXXXXAPPPXQKXXGXVWAXPP 702
V ++ P PP P P P P APPP G PP
Sbjct: 708 VPSAPPPPPPPPPANRSNGPSAPAPPLPP--PLPAAANKRNPPAPPPPPLMTGKKAPAPP 765
Query: 703 PKNXXXQKPXXXPGKXGXXXXXLSLXXPPLTXGNPXLSPPP 825
P KP PP + G +PPP
Sbjct: 766 PPPPQAPKPPGTVPPPPPLHGASGRPHPPSSKGLNAPAPPP 806
>08_01_0003 + 30085-30195,30289-30365,31080-31136,31668-33560,
33643-34147,34250-34358,34436-34548,34619-34806,
35481-36129,36169-36691,36760-36911,37042-37141,
37301-37416
Length = 1530
Score = 29.1 bits (62), Expect = 5.2
Identities = 26/100 (26%), Positives = 27/100 (27%)
Frame = +1
Query: 541 PXXPPXPXXXPPXPXXXXPXXXPXXXXXXXXXXXXXXAPPPXQKXXGXVWAXPPPKNXXX 720
P PP P PP P P P A PP PPP
Sbjct: 1137 PPPPPLPEGPPPLPSDSPPCQPP-------LPPSPPPATPPPPPPLSPSLPPPPPPPPLP 1189
Query: 721 QKPXXXPGKXGXXXXXLSLXXPPLTXGNPXLSPPPXXXSP 840
P P PPL P + PPP SP
Sbjct: 1190 SGPPPQPA------------PPPLPIQPPPIPPPPVPSSP 1217
>03_02_0455 -
8630543-8630893,8630994-8631068,8631149-8631223,
8631332-8631397,8631891-8631967,8632659-8633070
Length = 351
Score = 28.7 bits (61), Expect = 6.9
Identities = 18/68 (26%), Positives = 19/68 (27%)
Frame = +1
Query: 541 PXXPPXPXXXPPXPXXXXPXXXPXXXXXXXXXXXXXXAPPPXQKXXGXVWAXPPPKNXXX 720
P PP P PP P P P PPP G + PPP
Sbjct: 270 PQVPPPPPQAPPPPPPNAPMGMP-PRIPPPPVGGTQPPPPPPPLANGPPRSIPPPPMTGG 328
Query: 721 QKPXXXPG 744
PG
Sbjct: 329 AMANFTPG 336
>03_01_0515 - 3864796-3865425
Length = 209
Score = 28.3 bits (60), Expect = 9.1
Identities = 20/76 (26%), Positives = 22/76 (28%)
Frame = +1
Query: 652 APPPXQKXXGXVWAXPPPKNXXXQKPXXXPGKXGXXXXXLSLXXPPLTXGNPXLSPPPXX 831
+PPP + PPP P P L PP P SPPP
Sbjct: 47 SPPPLAPPPSVTSSPPPPAAGPLMPPPPPPPSVTSSPPPPPLPPPP---PPPAASPPPPP 103
Query: 832 XSPFXAXPXXXGTXXP 879
SP P P
Sbjct: 104 PSPPPPSPVKSSPPPP 119
>01_01_0224 - 1905978-1907084,1907489-1908070,1908653-1908667
Length = 567
Score = 28.3 bits (60), Expect = 9.1
Identities = 14/37 (37%), Positives = 21/37 (56%)
Frame = -3
Query: 381 ILKLTSRLNNTSIYGVRFKDHFPIALAEPRTSIAGPA 271
+LKL R T+I V+ ++ FPI +T+I PA
Sbjct: 206 VLKLGRRTGGTAIRVVQVENSFPIGACINKTAIQNPA 242
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,257,697
Number of Sequences: 37544
Number of extensions: 414702
Number of successful extensions: 1842
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1023
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1533
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2624101760
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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