Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP16_F_N07
         (892 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

07_03_1136 + 24218601-24218734,24218769-24219906                       29   3.8  
07_03_0329 + 16840051-16840917,16840999-16841342,16841444-168415...    28   8.7  
03_02_0350 - 7734494-7734952,7735765-7736133                           28   8.7  

>07_03_1136 + 24218601-24218734,24218769-24219906
          Length = 423

 Score = 29.5 bits (63), Expect = 3.8
 Identities = 17/53 (32%), Positives = 19/53 (35%)
 Frame = -1

Query: 850 GGGGVFXXPXPGRXKXXXEXFFXPRXXGAXKKKKXXGXGGGGXPPKKXXGGGG 692
           GGGG    P  G               G    +   G GGGG P +   GGGG
Sbjct: 152 GGGGALARPPGGGRGGALGRPPGGGGGGGGPGRAPGGGGGGGGPGRAPGGGGG 204



 Score = 29.1 bits (62), Expect = 5.0
 Identities = 11/26 (42%), Positives = 14/26 (53%)
 Frame = -1

Query: 769 GAXKKKKXXGXGGGGXPPKKXXGGGG 692
           G   +    G GGGG  P++  GGGG
Sbjct: 127 GGGARPPAPGGGGGGGAPRRVLGGGG 152


>07_03_0329 +
           16840051-16840917,16840999-16841342,16841444-16841574,
           16841671-16841792,16841877-16841983,16842104-16842236,
           16842342-16842458,16842560-16842667,16842716-16842742,
           16842759-16842830,16843462-16843584,16843671-16843833,
           16844140-16844264,16844355-16844489,16844574-16844677,
           16844772-16844834,16844930-16844993,16845186-16845318,
           16845414-16845487,16845603-16845697,16845799-16845830,
           16846201-16846355
          Length = 1097

 Score = 28.3 bits (60), Expect = 8.7
 Identities = 11/17 (64%), Positives = 11/17 (64%)
 Frame = -1

Query: 742 GXGGGGXPPKKXXGGGG 692
           G GGGG PP    GGGG
Sbjct: 61  GGGGGGGPPYYGGGGGG 77


>03_02_0350 - 7734494-7734952,7735765-7736133
          Length = 275

 Score = 28.3 bits (60), Expect = 8.7
 Identities = 11/20 (55%), Positives = 11/20 (55%)
 Frame = -1

Query: 742 GXGGGGXPPKKXXGGGGXXC 683
           G GGGG  P    GGGG  C
Sbjct: 19  GSGGGGGGPSGGGGGGGGPC 38


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,855,499
Number of Sequences: 37544
Number of extensions: 328663
Number of successful extensions: 1677
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 874
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1572
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2506954360
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)