Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP16_F_N06
         (884 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

01_06_0870 + 32601939-32602261,32602368-32602563,32603962-326040...    33   0.40 
01_06_1662 - 38974803-38974895,38975118-38975256,38976044-389761...    29   3.8  

>01_06_0870 +
           32601939-32602261,32602368-32602563,32603962-32604093,
           32604181-32604303
          Length = 257

 Score = 32.7 bits (71), Expect = 0.40
 Identities = 12/26 (46%), Positives = 18/26 (69%)
 Frame = +1

Query: 574 QMFEVVSDVGSYNKFLPWCKXSIVLK 651
           QMF VV+ V  Y  F+PWC+ S +++
Sbjct: 113 QMFAVVAAVDLYEDFVPWCQRSRIIR 138


>01_06_1662 -
           38974803-38974895,38975118-38975256,38976044-38976117,
           38976197-38976308,38976418-38976479,38976996-38977337
          Length = 273

 Score = 29.5 bits (63), Expect = 3.8
 Identities = 16/53 (30%), Positives = 27/53 (50%)
 Frame = +1

Query: 553 LLATPMXQMFEVVSDVGSYNKFLPWCKXSIVLKXXPRKPEXGLDPLXXLLSMN 711
           LL TP  + +  V+D+  +++F  W K  I+ +  P     G+D L  +L  N
Sbjct: 198 LLGTPTEEQWPGVTDLRDWHEFPQW-KPQILERQVPSLEPEGVDLLSKMLQYN 249


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,652,516
Number of Sequences: 37544
Number of extensions: 292987
Number of successful extensions: 492
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 475
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 492
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2503236492
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)