Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP16_F_M23
         (857 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

03_02_0445 - 8551912-8552047,8552729-8552896,8553785-8554068,855...    28   8.3  
01_05_0679 + 24230740-24230929,24231330-24231461,24231710-242319...    28   8.3  

>03_02_0445 -
           8551912-8552047,8552729-8552896,8553785-8554068,
           8554143-8555386,8556901-8556967,8557059-8557150,
           8557269-8557480,8558541-8558623,8559092-8559122,
           8559770-8559951,8560557-8560616,8561092-8561289,
           8561485-8561539,8562740-8562855,8563012-8563176,
           8563310-8563483,8564134-8564333,8564778-8564882,
           8565063-8565126,8566452-8566718
          Length = 1300

 Score = 28.3 bits (60), Expect = 8.3
 Identities = 12/40 (30%), Positives = 21/40 (52%)
 Frame = +3

Query: 204 NLLTNGFMNVDSCR*QVTADFRKSGLTHASSLLVKQSISC 323
           N++TNG MN  SC+     D+ +    + + LL+   + C
Sbjct: 410 NIVTNGSMNGRSCQDGSDTDYSEDASDYENVLLITGPVGC 449


>01_05_0679 +
           24230740-24230929,24231330-24231461,24231710-24231977,
           24232170-24232388,24233538-24233673,24233899-24234147,
           24234783-24235100
          Length = 503

 Score = 28.3 bits (60), Expect = 8.3
 Identities = 10/29 (34%), Positives = 15/29 (51%)
 Frame = -3

Query: 381 WPSSFCWSPMGSGERPSESHTKLIASPIM 295
           WP++ CW  M     PS  H  +I  P++
Sbjct: 14  WPTASCWQRMWVHPGPSFPHRMMIRHPLL 42


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,920,163
Number of Sequences: 37544
Number of extensions: 415968
Number of successful extensions: 779
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 756
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 778
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2397465936
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)