Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP16_F_M22
         (868 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

02_05_1170 + 34663853-34663928,34664038-34664078,34664317-346643...    32   0.52 
06_01_0444 + 3141018-3141503,3141967-3142066,3142940-3142980           30   2.1  
03_01_0300 + 2350232-2352274,2352349-2352669,2352752-2352838,235...    30   2.1  
12_01_0378 - 2946916-2947590                                           28   8.4  

>02_05_1170 + 34663853-34663928,34664038-34664078,34664317-34664386,
            34664499-34664647,34664784-34664879,34665406-34665476,
            34665637-34665698,34665778-34665841,34665950-34666034,
            34666129-34666255,34666381-34666454,34666539-34666599,
            34666683-34666771,34666897-34667206,34667763-34667815,
            34668299-34668370,34668648-34668914,34669015-34669047,
            34669163-34669245,34669522-34669594,34669834-34670170,
            34670302-34670633,34670816-34671135,34671261-34671612,
            34671691-34671906
          Length = 1170

 Score = 32.3 bits (70), Expect = 0.52
 Identities = 40/136 (29%), Positives = 57/136 (41%), Gaps = 23/136 (16%)
 Frame = +3

Query: 69   LDAPKMKPAIVILCLFVASLYAADSDVPNDILE------EQLYNSV-VVADYDSAVEKSK 227
            LD P  + A ++L  F   L++ DS  P  IL       E   NS   V D   A E S 
Sbjct: 646  LDCPLFRNARIVLDDFEVILHSPDSIAPVGILHPLKFHLEHKPNSFGTVGDSAIAQENSS 705

Query: 228  HLYE----------EKKSEVITNVVNKLIRNNKMNCME------YAYQLWLQGLQGTSSG 359
            +LYE          EKK E ++ V       N   C+       ++   W+Q   GTS G
Sbjct: 706  YLYEVDGAIAHSDVEKKQETLSPVTTVDACTNIDLCISKTGKKLFSIGCWIQDPCGTSEG 765

Query: 360  IVSQLSSDLSSPKTRL 407
            + + L + LS  + +L
Sbjct: 766  LKTDLVAVLSRIENQL 781


>06_01_0444 + 3141018-3141503,3141967-3142066,3142940-3142980
          Length = 208

 Score = 30.3 bits (65), Expect = 2.1
 Identities = 20/84 (23%), Positives = 34/84 (40%), Gaps = 1/84 (1%)
 Frame = +3

Query: 465 DDGRPAYGDGKDKTSPRVSWKLIALWENNKVYFKILNTERNQYLVL-GVGTNWNGXHMAF 641
           DD R      +D+ S   +W +  L  N      + +    +YL       +WN   +  
Sbjct: 24  DDDRSGVSLQQDRASVHAAWAVHILHFNGGDVLMLHSAANGRYLAAYRAEGSWNVERL-- 81

Query: 642 GVNSVDSFRAQWYLQPAKYDNDVL 713
            +N + S    WY   ++Y +DVL
Sbjct: 82  NLNRLPSLTFSWYALGSRYGDDVL 105


>03_01_0300 + 2350232-2352274,2352349-2352669,2352752-2352838,
            2353031-2353708,2353800-2353964,2354139-2354433,
            2354581-2354795,2354885-2355190,2355269-2355332,
            2355426-2355665,2355783-2355886
          Length = 1505

 Score = 30.3 bits (65), Expect = 2.1
 Identities = 14/58 (24%), Positives = 29/58 (50%)
 Frame = +1

Query: 37   DLSSFLGNTQDSTLQR*SPL*LFYVFSWHLCMLQIPTSLTTFWRSSFTIASSSPITTV 210
            D++  LG    +T+Q    + +    +W + +L +P ++   W   + IASS  +T +
Sbjct: 1054 DIAFRLGGFASTTIQLLGIVAVMSKVTWQVLILIVPMAVACMWMQRYYIASSRELTRI 1111


>12_01_0378 - 2946916-2947590
          Length = 224

 Score = 28.3 bits (60), Expect = 8.4
 Identities = 14/47 (29%), Positives = 27/47 (57%)
 Frame = +3

Query: 66  GLDAPKMKPAIVILCLFVASLYAADSDVPNDILEEQLYNSVVVADYD 206
           G+    ++P +++L    ASL AA++ VP    + ++  +VV  D+D
Sbjct: 87  GVHYDAIRPRLLLLLAGGASLGAANATVPGVFHQPRMSTTVVAIDFD 133


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,486,217
Number of Sequences: 37544
Number of extensions: 401490
Number of successful extensions: 1198
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1160
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1198
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2432722788
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)