BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP16_F_M22
(868 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ999006-1|ABJ99082.1| 282|Anopheles gambiae voltage-dependent ... 25 3.9
AY137768-1|AAN16031.1| 282|Anopheles gambiae porin protein. 25 3.9
AY082909-1|AAL89811.1| 282|Anopheles gambiae porin protein. 25 3.9
AY957503-1|AAY41942.1| 596|Anopheles gambiae vasa-like protein ... 24 6.9
AF295693-1|AAL55241.1| 786|Anopheles gambiae polyprotein protein. 24 6.9
>DQ999006-1|ABJ99082.1| 282|Anopheles gambiae voltage-dependent
anion channel protein.
Length = 282
Score = 24.6 bits (51), Expect = 3.9
Identities = 21/77 (27%), Positives = 37/77 (48%), Gaps = 5/77 (6%)
Frame = +2
Query: 257 HHKCREQTDTKQQ-DELHGVRLSTLAPGAPRDIVRD-CFPVEFRLIFAENAIKLMYK--- 421
+ +C ++ +T Q G + GA D+ +D C + + ++ I L Y+
Sbjct: 194 YQRCNDRLETAVQLSWASGSNATKFGMGAKYDLDKDACVRAK---VNNQSQIGLGYQQKL 250
Query: 422 RDGLALTLSNDVQGRRW 472
RDG+ LTLS V G+ +
Sbjct: 251 RDGITLTLSTLVDGKNF 267
>AY137768-1|AAN16031.1| 282|Anopheles gambiae porin protein.
Length = 282
Score = 24.6 bits (51), Expect = 3.9
Identities = 21/77 (27%), Positives = 37/77 (48%), Gaps = 5/77 (6%)
Frame = +2
Query: 257 HHKCREQTDTKQQ-DELHGVRLSTLAPGAPRDIVRD-CFPVEFRLIFAENAIKLMYK--- 421
+ +C ++ +T Q G + GA D+ +D C + + ++ I L Y+
Sbjct: 194 YQRCNDRLETAVQLSWASGSNATKFGMGAKYDLDKDACVRAK---VNNQSQIGLGYQQKL 250
Query: 422 RDGLALTLSNDVQGRRW 472
RDG+ LTLS V G+ +
Sbjct: 251 RDGITLTLSTLVDGKNF 267
>AY082909-1|AAL89811.1| 282|Anopheles gambiae porin protein.
Length = 282
Score = 24.6 bits (51), Expect = 3.9
Identities = 21/77 (27%), Positives = 37/77 (48%), Gaps = 5/77 (6%)
Frame = +2
Query: 257 HHKCREQTDTKQQ-DELHGVRLSTLAPGAPRDIVRD-CFPVEFRLIFAENAIKLMYK--- 421
+ +C ++ +T Q G + GA D+ +D C + + ++ I L Y+
Sbjct: 194 YQRCNDRLETAVQLSWASGSNATKFGMGAKYDLDKDACVRAK---VNNQSQIGLGYQQKL 250
Query: 422 RDGLALTLSNDVQGRRW 472
RDG+ LTLS V G+ +
Sbjct: 251 RDGITLTLSTLVDGKNF 267
>AY957503-1|AAY41942.1| 596|Anopheles gambiae vasa-like protein
protein.
Length = 596
Score = 23.8 bits (49), Expect = 6.9
Identities = 16/50 (32%), Positives = 24/50 (48%)
Frame = +3
Query: 462 GDDGRPAYGDGKDKTSPRVSWKLIALWENNKVYFKILNTERNQYLVLGVG 611
GD GRPAY D + +V + ++Y L TE ++ L+ G G
Sbjct: 104 GDGGRPAYSGNSDPSMDQVKTD-----KPRELYIPPLPTE-DESLIFGSG 147
>AF295693-1|AAL55241.1| 786|Anopheles gambiae polyprotein protein.
Length = 786
Score = 23.8 bits (49), Expect = 6.9
Identities = 15/62 (24%), Positives = 27/62 (43%)
Frame = +3
Query: 153 NDILEEQLYNSVVVADYDSAVEKSKHLYEEKKSEVITNVVNKLIRNNKMNCMEYAYQLWL 332
+D +EQ Y + D + + + +E K E TNV + I ++ + + W
Sbjct: 565 DDESKEQTYGDPKIEDNPTESVEIEWSLDETKREAKTNVADDTISESEFYGWDCSDDGWP 624
Query: 333 QG 338
QG
Sbjct: 625 QG 626
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 774,520
Number of Sequences: 2352
Number of extensions: 15592
Number of successful extensions: 195
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 195
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 195
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 92613024
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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